Gene annotation
Transcriptome id Sobic.006G140000.1,Sobic.006G140000.2
Synonym Sb06g021910
Functional annotation receptor-like protein kinase precursor, putative, expressed
UniProt A0A1B6PLW2
Pfam PF00560 PF08263 PF00069
Panther DB PTHR27000 PTHR27000:SF191
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G63930 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os04g42700.1 : receptor-like protein kinase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a010754
Brachypodium KQJ83454
Barley -
Wheat TraesCS2A02G360300 , TraesCS2D02G359100 , TraesCS2D02G359100 , TraesCS2D02G359100 , TraesCS2A02G360300 , TraesCS2A02G360300 , TraesCS2A02G360300 , TraesCS2B02G379400
Populus -


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cDNA sequences
Sobic.006G140000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G488500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"OsFBK12(Ortholog in rice:Chen et al., 2013)"(PubMedID : 31659851)@OsFBK12 - F-box domain and kelch repeat containing protein, expressed -
2 Sobic.003G348400 ankyrin repeat-containing protein, putative, expressed -
3 Sobic.004G185900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@galactosyltransferase, putative, expressed -
4 Sobic.003G338400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase NAK, putative, expressed -
5 Sobic.001G151800 expressed protein K16275: BAH, E3 ubiquitin-protein ligase BAH
6 Sobic.005G215900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
7 Sobic.003G085300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@BBTI12 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
8 Sobic.010G016400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxisomal biogenesis factor 11, putative, expressed -
9 Sobic.004G102400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FYVE zinc finger domain containing protein, expressed -
10 Sobic.005G150800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@yippee zinc-binding protein, putative, expressed -
11 Sobic.007G148800 cupin superfamily protein, putative, expressed K09705: uncharacterized protein
12 Sobic.005G139400 SNARE associated Golgi protein, putative, expressed -
13 Sobic.003G009100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
14 Sobic.008G107500 WRKY96, expressed -
15 Sobic.004G246200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dihydroorotate dihydrogenase protein, putative, expressed K00207: dihydropyrimidine dehydrogenase (NADP+)
16 Sobic.009G016800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
17 Sobic.004G074500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2
18 Sobic.001G010400 snRK1-interacting protein 1, putative, expressed -
19 Sobic.004G169700 - -
20 Sobic.004G236600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBK10 - F-box domain and kelch repeat containing protein, expressed -


Gene co-expression network
sample Sobic006G140000 Sobic006G140000 Sobic001G488500 Sobic001G488500 Sobic006G140000--Sobic001G488500 Sobic003G348400 Sobic003G348400 Sobic006G140000--Sobic003G348400 Sobic004G185900 Sobic004G185900 Sobic006G140000--Sobic004G185900 Sobic003G338400 Sobic003G338400 Sobic006G140000--Sobic003G338400 Sobic001G151800 Sobic001G151800 Sobic006G140000--Sobic001G151800 Sobic005G215900 Sobic005G215900 Sobic006G140000--Sobic005G215900 Sobic003G085300 Sobic003G085300 Sobic006G140000--Sobic003G085300 Sobic010G016400 Sobic010G016400 Sobic006G140000--Sobic010G016400 Sobic004G102400 Sobic004G102400 Sobic006G140000--Sobic004G102400 Sobic004G236600 Sobic004G236600 Sobic001G488500--Sobic004G236600 Sobic005G152100 Sobic005G152100 Sobic001G488500--Sobic005G152100 Sobic004G246200 Sobic004G246200 Sobic001G488500--Sobic004G246200 Sobic005G231900 Sobic005G231900 Sobic001G488500--Sobic005G231900 Sobic002G322900 Sobic002G322900 Sobic001G488500--Sobic002G322900 Sobic004G255000 Sobic004G255000 Sobic001G488500--Sobic004G255000 Sobic005G079900 Sobic005G079900 Sobic001G488500--Sobic005G079900 Sobic010G206000 Sobic010G206000 Sobic001G488500--Sobic010G206000 Sobic001G488500--Sobic005G215900 Sobic007G125900 Sobic007G125900 Sobic003G348400--Sobic007G125900 Sobic005G117400 Sobic005G117400 Sobic003G348400--Sobic005G117400 Sobic003G348400--Sobic001G151800 Sobic003G348400--Sobic003G338400 Sobic003G348400--Sobic004G102400 Sobic003G348400--Sobic006G140000 Sobic006G091100 Sobic006G091100 Sobic003G348400--Sobic006G091100 Sobic005G212700 Sobic005G212700 Sobic003G348400--Sobic005G212700 Sobic001G003000 Sobic001G003000 Sobic003G348400--Sobic001G003000 Sobic001G010400 Sobic001G010400 Sobic004G185900--Sobic001G010400 Sobic007G148800 Sobic007G148800 Sobic004G185900--Sobic007G148800 Sobic004G185900--Sobic006G140000 Sobic004G054300 Sobic004G054300 Sobic004G185900--Sobic004G054300 Sobic004G185900--Sobic010G016400 Sobic002G249000 Sobic002G249000 Sobic004G185900--Sobic002G249000 Sobic002G113800 Sobic002G113800 Sobic004G185900--Sobic002G113800 Sobic005G139400 Sobic005G139400 Sobic004G185900--Sobic005G139400 Sobic010G176700 Sobic010G176700 Sobic004G185900--Sobic010G176700 Sobic003G338400--Sobic004G102400 Sobic003G338400--Sobic003G348400 Sobic004G341200 Sobic004G341200 Sobic003G338400--Sobic004G341200 Sobic009G167700 Sobic009G167700 Sobic003G338400--Sobic009G167700 Sobic003G338400--Sobic010G016400 Sobic003G338400--Sobic001G003000 Sobic001G158500 Sobic001G158500 Sobic003G338400--Sobic001G158500 Sobic003G338400--Sobic006G140000 Sobic001G089800 Sobic001G089800 Sobic003G338400--Sobic001G089800 Sobic009G236200 Sobic009G236200 Sobic001G151800--Sobic009G236200 Sobic002G355200 Sobic002G355200 Sobic001G151800--Sobic002G355200 Sobic001G151800--Sobic007G125900 Sobic003G232900 Sobic003G232900 Sobic001G151800--Sobic003G232900 Sobic001G151800--Sobic003G348400 Sobic001G151800--Sobic004G236600 Sobic001G151800--Sobic005G117400 Sobic001G151800--Sobic006G140000 Sobic009G004200 Sobic009G004200 Sobic001G151800--Sobic009G004200 Sobic005G215900--Sobic005G152100 Sobic005G215900--Sobic004G236600 Sobic002G381300 Sobic002G381300 Sobic005G215900--Sobic002G381300 Sobic005G216000 Sobic005G216000 Sobic005G215900--Sobic005G216000 Sobic005G215900--Sobic001G488500 Sobic008G024400 Sobic008G024400 Sobic005G215900--Sobic008G024400 Sobic002G304000 Sobic002G304000 Sobic005G215900--Sobic002G304000 Sobic003G149200 Sobic003G149200 Sobic005G215900--Sobic003G149200 Sobic001G249300 Sobic001G249300 Sobic005G215900--Sobic001G249300 Sobic004G308000 Sobic004G308000 Sobic003G085300--Sobic004G308000 Sobic001G212000 Sobic001G212000 Sobic003G085300--Sobic001G212000 Sobic003G085300--Sobic005G152100 Sobic004G074500 Sobic004G074500 Sobic003G085300--Sobic004G074500 Sobic003G085300--Sobic004G246200 Sobic001G412700 Sobic001G412700 Sobic003G085300--Sobic001G412700 Sobic003G085300--Sobic008G024400 Sobic003G085300--Sobic005G215900 Sobic001G101400 Sobic001G101400 Sobic003G085300--Sobic001G101400 Sobic010G016400--Sobic005G139400 Sobic010G016400--Sobic009G167700 Sobic004G347300 Sobic004G347300 Sobic010G016400--Sobic004G347300 Sobic006G119200 Sobic006G119200 Sobic010G016400--Sobic006G119200 Sobic010G016400--Sobic007G148800 Sobic006G217700 Sobic006G217700 Sobic010G016400--Sobic006G217700 Sobic010G016400--Sobic001G010400 Sobic010G016400--Sobic004G102400 Sobic009G172500 Sobic009G172500 Sobic010G016400--Sobic009G172500 Sobic004G102400--Sobic003G338400 Sobic004G102400--Sobic001G158500 Sobic004G102400--Sobic001G003000 Sobic004G102400--Sobic009G167700 Sobic005G150800 Sobic005G150800 Sobic004G102400--Sobic005G150800 Sobic006G271200 Sobic006G271200 Sobic004G102400--Sobic006G271200 Sobic004G102400--Sobic001G089800 Sobic001G057800 Sobic001G057800 Sobic004G102400--Sobic001G057800 Sobic004G042300 Sobic004G042300 Sobic004G102400--Sobic004G042300
Octagon: transcription factors


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