Gene annotation
Transcriptome id Sobic.004G169700.1
Synonym IDL2
Functional annotation -
UniProt A0A194YQ39
Pfam -
Panther DB PTHR33599 PTHR33599:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G18715 : inflorescence deficient in abscission (IDA)-like 4
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G169700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G401200 selenium-binding protein, putative, expressed K17285: methanethiol oxidase
2 Sobic.004G260000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
3 Sobic.007G219900 uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
4 Sobic.004G304200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
5 Sobic.003G216000 pleiotropic drug resistance protein, putative, expressed -
6 Sobic.006G140000 receptor-like protein kinase precursor, putative, expressed -
7 Sobic.003G366400 uricase, putative, expressed K00365: urate oxidase
8 Sobic.005G018500 NAC domain transcription factor, putative, expressed -
9 Sobic.004G246200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dihydroorotate dihydrogenase protein, putative, expressed K00207: dihydropyrimidine dehydrogenase (NADP+)
10 Sobic.006G052100 nodulin, putative, expressed -
11 Sobic.005G137400 - -
12 Sobic.004G074700 bZIP transcription factor domain containing protein, expressed -
13 Sobic.008G062200 dehydrogenase E1 component domain containing protein, expressed K00166: BCKDHA, 2-oxoisovalerate dehydrogenase E1 component alpha subunit
14 Sobic.003G329400 dihydropyrimidinase, putative, expressed K01464: DPYS, dht, dihydropyrimidinase
15 Sobic.009G054500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@lipase, putative, expressed -
16 Sobic.004G236600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBK10 - F-box domain and kelch repeat containing protein, expressed -
17 Sobic.001G488500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"OsFBK12(Ortholog in rice:Chen et al., 2013)"(PubMedID : 31659851)@OsFBK12 - F-box domain and kelch repeat containing protein, expressed -
18 Sobic.005G151700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed K16292: CEP, KDEL-tailed cysteine endopeptidase
19 Sobic.003G219600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ThiF family domain containing protein, putative, expressed K08337: ubiquitin-like modifier-activating enzyme ATG7
20 Sobic.001G227800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic004G169700 Sobic004G169700 Sobic003G401200 Sobic003G401200 Sobic004G169700--Sobic003G401200 Sobic004G260000 Sobic004G260000 Sobic004G169700--Sobic004G260000 Sobic007G219900 Sobic007G219900 Sobic004G169700--Sobic007G219900 Sobic004G304200 Sobic004G304200 Sobic004G169700--Sobic004G304200 Sobic003G216000 Sobic003G216000 Sobic004G169700--Sobic003G216000 Sobic006G140000 Sobic006G140000 Sobic004G169700--Sobic006G140000 Sobic003G366400 Sobic003G366400 Sobic004G169700--Sobic003G366400 Sobic005G018500 Sobic005G018500 Sobic004G169700--Sobic005G018500 Sobic004G246200 Sobic004G246200 Sobic004G169700--Sobic004G246200 Sobic003G401200--Sobic003G366400 Sobic003G401200--Sobic004G169700 Sobic009G152700 Sobic009G152700 Sobic003G401200--Sobic009G152700 Sobic008G062200 Sobic008G062200 Sobic003G401200--Sobic008G062200 Sobic003G219600 Sobic003G219600 Sobic003G401200--Sobic003G219600 Sobic001G227800 Sobic001G227800 Sobic003G401200--Sobic001G227800 Sobic009G211400 Sobic009G211400 Sobic003G401200--Sobic009G211400 Sobic003G329400 Sobic003G329400 Sobic003G401200--Sobic003G329400 Sobic002G215700 Sobic002G215700 Sobic003G401200--Sobic002G215700 Sobic004G260000--Sobic005G018500 Sobic009G054500 Sobic009G054500 Sobic004G260000--Sobic009G054500 Sobic009G226300 Sobic009G226300 Sobic004G260000--Sobic009G226300 Sobic004G255000 Sobic004G255000 Sobic004G260000--Sobic004G255000 Sobic001G249300 Sobic001G249300 Sobic004G260000--Sobic001G249300 Sobic004G260000--Sobic008G062200 Sobic007G187300 Sobic007G187300 Sobic004G260000--Sobic007G187300 Sobic004G260000--Sobic003G219600 Sobic004G260000--Sobic009G211400 Sobic006G127100 Sobic006G127100 Sobic007G219900--Sobic006G127100 Sobic007G219900--Sobic005G018500 Sobic007G219900--Sobic003G366400 Sobic007G219900--Sobic009G054500 Sobic003G148800 Sobic003G148800 Sobic007G219900--Sobic003G148800 Sobic007G219900--Sobic004G260000 Sobic007G219900--Sobic002G215700 Sobic007G219900--Sobic009G226300 Sobic007G219900--Sobic001G227800 Sobic004G304200--Sobic003G216000 Sobic005G137400 Sobic005G137400 Sobic004G304200--Sobic005G137400 Sobic004G304200--Sobic004G169700 Sobic002G098200 Sobic002G098200 Sobic004G304200--Sobic002G098200 Sobic004G304200--Sobic004G246200 Sobic004G304200--Sobic003G366400 Sobic005G151700 Sobic005G151700 Sobic004G304200--Sobic005G151700 Sobic004G304200--Sobic004G260000 Sobic004G074500 Sobic004G074500 Sobic004G304200--Sobic004G074500 Sobic003G216000--Sobic005G151700 Sobic003G216000--Sobic004G304200 Sobic003G251301 Sobic003G251301 Sobic003G216000--Sobic003G251301 Sobic010G170550 Sobic010G170550 Sobic003G216000--Sobic010G170550 Sobic001G483500 Sobic001G483500 Sobic003G216000--Sobic001G483500 Sobic004G006966 Sobic004G006966 Sobic003G216000--Sobic004G006966 Sobic001G488500 Sobic001G488500 Sobic006G140000--Sobic001G488500 Sobic003G348400 Sobic003G348400 Sobic006G140000--Sobic003G348400 Sobic004G185900 Sobic004G185900 Sobic006G140000--Sobic004G185900 Sobic003G338400 Sobic003G338400 Sobic006G140000--Sobic003G338400 Sobic001G151800 Sobic001G151800 Sobic006G140000--Sobic001G151800 Sobic005G215900 Sobic005G215900 Sobic006G140000--Sobic005G215900 Sobic003G085300 Sobic003G085300 Sobic006G140000--Sobic003G085300 Sobic010G016400 Sobic010G016400 Sobic006G140000--Sobic010G016400 Sobic004G102400 Sobic004G102400 Sobic006G140000--Sobic004G102400 Sobic003G366400--Sobic007G219900 Sobic003G366400--Sobic003G401200 Sobic003G366400--Sobic002G215700 Sobic003G366400--Sobic004G260000 Sobic003G366400--Sobic001G227800 Sobic003G366400--Sobic004G246200 Sobic003G366400--Sobic005G018500 Sobic004G101900 Sobic004G101900 Sobic003G366400--Sobic004G101900 Sobic003G366400--Sobic009G211400 Sobic005G018500--Sobic009G054500 Sobic005G018500--Sobic004G260000 Sobic005G018500--Sobic004G255000 Sobic003G259200 Sobic003G259200 Sobic005G018500--Sobic003G259200 Sobic005G018500--Sobic009G226300 Sobic005G018500--Sobic001G249300 Sobic005G018500--Sobic003G148800 Sobic005G018500--Sobic003G219600 Sobic005G018500--Sobic007G187300 Sobic005G152100 Sobic005G152100 Sobic004G246200--Sobic005G152100 Sobic004G246200--Sobic005G018500 Sobic004G246200--Sobic003G259200 Sobic004G246200--Sobic004G255000 Sobic001G412700 Sobic001G412700 Sobic004G246200--Sobic001G412700 Sobic004G246200--Sobic004G260000 Sobic002G322900 Sobic002G322900 Sobic004G246200--Sobic002G322900 Sobic004G246200--Sobic009G054500 Sobic008G024400 Sobic008G024400 Sobic004G246200--Sobic008G024400
Octagon: transcription factors


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