Gene annotation
Transcriptome id Sobic.005G137400.1
Synonym
Functional annotation -
UniProt A0A1B6PSA7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G304200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
2 Sobic.003G216000 pleiotropic drug resistance protein, putative, expressed -
3 Sobic.005G215300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@laccase-15 precursor, putative, expressed K05909: laccase
4 Sobic.002G098200 expressed protein -
5 Sobic.004G169700 - -
6 Sobic.001G101400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII4 - Proteinase inhibitor II family protein precursor, expressed -
7 Sobic.002G011600 NB-ARC domain containing protein, expressed -
8 Sobic.002G013400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.005G151700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed K16292: CEP, KDEL-tailed cysteine endopeptidase
10 Sobic.004G246200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dihydroorotate dihydrogenase protein, putative, expressed K00207: dihydropyrimidine dehydrogenase (NADP+)
11 Sobic.005G018500 NAC domain transcription factor, putative, expressed -
12 Sobic.010G170550 - -
13 Sobic.001G145600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thaumatin family domain containing protein, expressed -
14 Sobic.001G483500 DUF567 domain containing protein, putative, expressed -
15 Sobic.004G260000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
16 Sobic.007G003200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
17 Sobic.001G212000 GEM, putative, expressed -
18 Sobic.004G006966 - -
19 Sobic.004G006966 - -
20 Sobic.004G006966 - -


Gene co-expression network
sample Sobic005G137400 Sobic005G137400 Sobic004G304200 Sobic004G304200 Sobic005G137400--Sobic004G304200 Sobic003G216000 Sobic003G216000 Sobic005G137400--Sobic003G216000 Sobic005G215300 Sobic005G215300 Sobic005G137400--Sobic005G215300 Sobic002G098200 Sobic002G098200 Sobic005G137400--Sobic002G098200 Sobic004G169700 Sobic004G169700 Sobic005G137400--Sobic004G169700 Sobic001G101400 Sobic001G101400 Sobic005G137400--Sobic001G101400 Sobic002G011600 Sobic002G011600 Sobic005G137400--Sobic002G011600 Sobic002G013400 Sobic002G013400 Sobic005G137400--Sobic002G013400 Sobic005G151700 Sobic005G151700 Sobic005G137400--Sobic005G151700 Sobic004G304200--Sobic003G216000 Sobic004G304200--Sobic005G137400 Sobic004G304200--Sobic004G169700 Sobic004G304200--Sobic002G098200 Sobic004G246200 Sobic004G246200 Sobic004G304200--Sobic004G246200 Sobic003G366400 Sobic003G366400 Sobic004G304200--Sobic003G366400 Sobic004G304200--Sobic005G151700 Sobic004G260000 Sobic004G260000 Sobic004G304200--Sobic004G260000 Sobic004G074500 Sobic004G074500 Sobic004G304200--Sobic004G074500 Sobic003G216000--Sobic005G151700 Sobic003G216000--Sobic004G304200 Sobic003G251301 Sobic003G251301 Sobic003G216000--Sobic003G251301 Sobic010G170550 Sobic010G170550 Sobic003G216000--Sobic010G170550 Sobic001G483500 Sobic001G483500 Sobic003G216000--Sobic001G483500 Sobic004G006966 Sobic004G006966 Sobic003G216000--Sobic004G006966 Sobic005G215300--Sobic001G101400 Sobic010G016800 Sobic010G016800 Sobic005G215300--Sobic010G016800 Sobic009G061300 Sobic009G061300 Sobic005G215300--Sobic009G061300 Sobic005G215300--Sobic004G006966 Sobic005G215300--Sobic001G483500 Sobic002G058200 Sobic002G058200 Sobic002G098200--Sobic002G058200 Sobic002G098200--Sobic004G304200 Sobic002G098200--Sobic003G216000 Sobic002G098200--Sobic005G137400 Sobic005G043600 Sobic005G043600 Sobic002G098200--Sobic005G043600 Sobic009G012900 Sobic009G012900 Sobic002G098200--Sobic009G012900 Sobic002G100700 Sobic002G100700 Sobic002G098200--Sobic002G100700 Sobic002G098200--Sobic004G169700 Sobic002G098200--Sobic002G011600 Sobic003G401200 Sobic003G401200 Sobic004G169700--Sobic003G401200 Sobic004G169700--Sobic004G260000 Sobic007G219900 Sobic007G219900 Sobic004G169700--Sobic007G219900 Sobic004G169700--Sobic004G304200 Sobic004G169700--Sobic003G216000 Sobic006G140000 Sobic006G140000 Sobic004G169700--Sobic006G140000 Sobic004G169700--Sobic003G366400 Sobic005G018500 Sobic005G018500 Sobic004G169700--Sobic005G018500 Sobic004G169700--Sobic004G246200 Sobic001G101400--Sobic001G483500 Sobic001G101400--Sobic010G016800 Sobic001G101400--Sobic005G215300 Sobic001G212000 Sobic001G212000 Sobic001G101400--Sobic001G212000 Sobic001G101400--Sobic004G006966 Sobic009G029600 Sobic009G029600 Sobic002G011600--Sobic009G029600 Sobic001G280200 Sobic001G280200 Sobic002G011600--Sobic001G280200 Sobic006G030700 Sobic006G030700 Sobic002G011600--Sobic006G030700 Sobic002G011600--Sobic005G151700 Sobic007G187300 Sobic007G187300 Sobic002G011600--Sobic007G187300 Sobic002G011600--Sobic005G018500 Sobic001G249300 Sobic001G249300 Sobic002G011600--Sobic001G249300 Sobic009G211400 Sobic009G211400 Sobic002G011600--Sobic009G211400 Sobic010G098100 Sobic010G098100 Sobic002G011600--Sobic010G098100 Sobic002G013400--Sobic005G137400 Sobic010G230800 Sobic010G230800 Sobic002G013400--Sobic010G230800 Sobic002G013400--Sobic004G304200 Sobic002G013400--Sobic002G098200 Sobic010G230900 Sobic010G230900 Sobic002G013400--Sobic010G230900 Sobic005G169200 Sobic005G169200 Sobic002G013400--Sobic005G169200 Sobic005G126200 Sobic005G126200 Sobic002G013400--Sobic005G126200 Sobic002G013400--Sobic002G011600 Sobic002G013400--Sobic003G216000 Sobic005G151700--Sobic010G098100 Sobic005G151700--Sobic001G483500 Sobic005G151700--Sobic007G187300 Sobic003G259200 Sobic003G259200 Sobic005G151700--Sobic003G259200 Sobic003G219600 Sobic003G219600 Sobic005G151700--Sobic003G219600 Sobic005G151700--Sobic009G211400 Sobic005G151700--Sobic001G249300 Sobic005G151700--Sobic005G018500 Sobic005G151700--Sobic009G029600
Octagon: transcription factors


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