Gene annotation
Transcriptome id Sobic.010G170550.1
Synonym -
Functional annotation -
UniProt A0A1W0VTK2
Pfam -
Panther DB PTHR33923
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g31690.1 : expressed protein
MaizeGDB (Corn) Zm00025a043514
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G269700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@SAM dependent carboxyl methyltransferase, putative, expressed -
2 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
3 Sobic.004G255000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aspartic proteinase nepenthesin-2 precursor, putative, expressed -
4 Sobic.003G219600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ThiF family domain containing protein, putative, expressed K08337: ubiquitin-like modifier-activating enzyme ATG7
5 Sobic.001G483500 DUF567 domain containing protein, putative, expressed -
6 Sobic.005G151700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed K16292: CEP, KDEL-tailed cysteine endopeptidase
7 Sobic.003G216000 pleiotropic drug resistance protein, putative, expressed -
8 Sobic.006G100400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.001G251900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@exonuclease, putative, expressed -
10 Sobic.003G259200 -(PubMedID : 26976818)@uncharacterized kinase mug58, putative, expressed K15918: D-glycerate 3-kinase
11 Sobic.005G018500 NAC domain transcription factor, putative, expressed -
12 Sobic.002G011600 NB-ARC domain containing protein, expressed -
13 Sobic.001G412700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@IN2-1 protein, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.009G211400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
15 Sobic.003G257100 YT521-B-like family domain containing protein, expressed -
16 Sobic.002G409500 lipase precursor, putative, expressed -
17 Sobic.004G006966 - -
18 Sobic.004G006966 - -
19 Sobic.004G006966 - -
20 Sobic.004G006966 - -


Gene co-expression network
sample Sobic010G170550 Sobic010G170550 Sobic003G269700 Sobic003G269700 Sobic010G170550--Sobic003G269700 Sobic009G029600 Sobic009G029600 Sobic010G170550--Sobic009G029600 Sobic004G255000 Sobic004G255000 Sobic010G170550--Sobic004G255000 Sobic003G219600 Sobic003G219600 Sobic010G170550--Sobic003G219600 Sobic001G483500 Sobic001G483500 Sobic010G170550--Sobic001G483500 Sobic005G151700 Sobic005G151700 Sobic010G170550--Sobic005G151700 Sobic003G216000 Sobic003G216000 Sobic010G170550--Sobic003G216000 Sobic006G100400 Sobic006G100400 Sobic010G170550--Sobic006G100400 Sobic001G251900 Sobic001G251900 Sobic010G170550--Sobic001G251900 Sobic003G269700--Sobic004G255000 Sobic001G412700 Sobic001G412700 Sobic003G269700--Sobic001G412700 Sobic003G269700--Sobic009G029600 Sobic003G269700--Sobic001G483500 Sobic003G269700--Sobic003G219600 Sobic003G269700--Sobic005G151700 Sobic003G269700--Sobic006G100400 Sobic003G269700--Sobic010G170550 Sobic003G259200 Sobic003G259200 Sobic003G269700--Sobic003G259200 Sobic009G029600--Sobic004G255000 Sobic001G280200 Sobic001G280200 Sobic009G029600--Sobic001G280200 Sobic009G029600--Sobic003G219600 Sobic001G249300 Sobic001G249300 Sobic009G029600--Sobic001G249300 Sobic009G211400 Sobic009G211400 Sobic009G029600--Sobic009G211400 Sobic006G030700 Sobic006G030700 Sobic009G029600--Sobic006G030700 Sobic009G054500 Sobic009G054500 Sobic009G029600--Sobic009G054500 Sobic002G215800 Sobic002G215800 Sobic009G029600--Sobic002G215800 Sobic009G226300 Sobic009G226300 Sobic009G029600--Sobic009G226300 Sobic004G255000--Sobic009G029600 Sobic005G018500 Sobic005G018500 Sobic004G255000--Sobic005G018500 Sobic004G255000--Sobic001G249300 Sobic004G255000--Sobic009G054500 Sobic004G255000--Sobic001G280200 Sobic004G255000--Sobic003G259200 Sobic004G260000 Sobic004G260000 Sobic004G255000--Sobic004G260000 Sobic004G255000--Sobic003G219600 Sobic005G152100 Sobic005G152100 Sobic004G255000--Sobic005G152100 Sobic003G219600--Sobic009G211400 Sobic003G219600--Sobic009G029600 Sobic003G219600--Sobic003G259200 Sobic003G219600--Sobic009G054500 Sobic003G219600--Sobic005G018500 Sobic003G219600--Sobic004G255000 Sobic003G219600--Sobic001G249300 Sobic003G219600--Sobic004G260000 Sobic003G219600--Sobic009G226300 Sobic010G098100 Sobic010G098100 Sobic001G483500--Sobic010G098100 Sobic001G483500--Sobic005G151700 Sobic004G006966 Sobic004G006966 Sobic001G483500--Sobic004G006966 Sobic001G101400 Sobic001G101400 Sobic001G483500--Sobic001G101400 Sobic001G483500--Sobic001G251900 Sobic005G151700--Sobic010G098100 Sobic005G151700--Sobic001G483500 Sobic007G187300 Sobic007G187300 Sobic005G151700--Sobic007G187300 Sobic005G151700--Sobic003G259200 Sobic005G151700--Sobic003G219600 Sobic005G151700--Sobic009G211400 Sobic005G151700--Sobic001G249300 Sobic005G151700--Sobic005G018500 Sobic005G151700--Sobic009G029600 Sobic003G216000--Sobic005G151700 Sobic004G304200 Sobic004G304200 Sobic003G216000--Sobic004G304200 Sobic003G251301 Sobic003G251301 Sobic003G216000--Sobic003G251301 Sobic003G216000--Sobic010G170550 Sobic003G216000--Sobic001G483500 Sobic003G216000--Sobic004G006966 Sobic006G100400--Sobic003G269700 Sobic006G100400--Sobic003G219600 Sobic006G100400--Sobic001G483500 Sobic006G100400--Sobic005G151700 Sobic006G100400--Sobic003G259200 Sobic006G100400--Sobic001G251900 Sobic006G100400--Sobic004G255000 Sobic002G409500 Sobic002G409500 Sobic006G100400--Sobic002G409500 Sobic006G100400--Sobic010G098100 Sobic001G251900--Sobic001G483500 Sobic001G251900--Sobic003G219600 Sobic001G251900--Sobic004G006966 Sobic001G251900--Sobic006G100400 Sobic001G251900--Sobic005G151700
Octagon: transcription factors


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