Gene annotation
Transcriptome id Sobic.001G145600.1
Synonym ATOSM34, Sb01g012700, OSM34
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
thaumatin family domain containing protein, expressed
UniProt C5WQD8
Pfam PF00314
Panther DB PTHR31048 PTHR31048:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G11650 : osmotin 34
RAP-DB (Rice) LOC_Os03g46060.1 : thaumatin family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a007531 , Zm00025a017185
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G011600 NB-ARC domain containing protein, expressed -
2 Sobic.001G145700 thaumatin, putative, expressed -
3 Sobic.006G132500 CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
4 Sobic.003G244600 similar to PRm 3(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
5 Sobic.006G030700 receptor kinase, putative, expressed -
6 Sobic.008G182300 thaumatin, putative, expressed -
7 Sobic.005G018500 NAC domain transcription factor, putative, expressed -
8 Sobic.009G226300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
9 Sobic.009G181200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-la.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
10 Sobic.009G054500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@lipase, putative, expressed -
11 Sobic.003G219600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ThiF family domain containing protein, putative, expressed K08337: ubiquitin-like modifier-activating enzyme ATG7
12 Sobic.003G148800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K09699: DBT, 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase)
13 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
14 Sobic.001G249300 Cf2/Cf5 disease resistance protein, putative, expressed -
15 Sobic.005G215300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@laccase-15 precursor, putative, expressed K05909: laccase
16 Sobic.001G162700 "phosphatidylinositol phosphatase, up-regulated under severe drought stress"(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed K01106: inositol-1,4,5-trisphosphate 5-phosphatase
17 Sobic.003G355600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
18 Sobic.001G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
19 Sobic.010G047800 phospholipase, putative, expressed -
20 Sobic.004G260000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G145600 Sobic001G145600 Sobic002G011600 Sobic002G011600 Sobic001G145600--Sobic002G011600 Sobic001G145700 Sobic001G145700 Sobic001G145600--Sobic001G145700 Sobic006G132500 Sobic006G132500 Sobic001G145600--Sobic006G132500 Sobic003G244600 Sobic003G244600 Sobic001G145600--Sobic003G244600 Sobic006G030700 Sobic006G030700 Sobic001G145600--Sobic006G030700 Sobic008G182300 Sobic008G182300 Sobic001G145600--Sobic008G182300 Sobic005G018500 Sobic005G018500 Sobic001G145600--Sobic005G018500 Sobic009G226300 Sobic009G226300 Sobic001G145600--Sobic009G226300 Sobic009G181200 Sobic009G181200 Sobic001G145600--Sobic009G181200 Sobic009G029600 Sobic009G029600 Sobic002G011600--Sobic009G029600 Sobic001G280200 Sobic001G280200 Sobic002G011600--Sobic001G280200 Sobic002G011600--Sobic006G030700 Sobic005G151700 Sobic005G151700 Sobic002G011600--Sobic005G151700 Sobic007G187300 Sobic007G187300 Sobic002G011600--Sobic007G187300 Sobic002G011600--Sobic005G018500 Sobic001G249300 Sobic001G249300 Sobic002G011600--Sobic001G249300 Sobic009G211400 Sobic009G211400 Sobic002G011600--Sobic009G211400 Sobic010G098100 Sobic010G098100 Sobic002G011600--Sobic010G098100 Sobic005G169200 Sobic005G169200 Sobic001G145700--Sobic005G169200 Sobic001G145700--Sobic008G182300 Sobic008G182600 Sobic008G182600 Sobic001G145700--Sobic008G182600 Sobic001G145700--Sobic009G181200 Sobic008G182800 Sobic008G182800 Sobic001G145700--Sobic008G182800 Sobic001G145700--Sobic001G145600 Sobic010G230800 Sobic010G230800 Sobic001G145700--Sobic010G230800 Sobic009G073500 Sobic009G073500 Sobic001G145700--Sobic009G073500 Sobic006G076800 Sobic006G076800 Sobic001G145700--Sobic006G076800 Sobic010G210200 Sobic010G210200 Sobic006G132500--Sobic010G210200 Sobic006G132500--Sobic008G182300 Sobic006G132500--Sobic003G244600 Sobic005G169400 Sobic005G169400 Sobic006G132500--Sobic005G169400 Sobic006G132500--Sobic001G145600 Sobic003G111300 Sobic003G111300 Sobic006G132500--Sobic003G111300 Sobic005G215900 Sobic005G215900 Sobic006G132500--Sobic005G215900 Sobic002G023300 Sobic002G023300 Sobic006G132500--Sobic002G023300 Sobic006G132500--Sobic001G145700 Sobic008G189200 Sobic008G189200 Sobic003G244600--Sobic008G189200 Sobic003G244600--Sobic006G030700 Sobic002G304000 Sobic002G304000 Sobic003G244600--Sobic002G304000 Sobic006G091700 Sobic006G091700 Sobic003G244600--Sobic006G091700 Sobic003G105800 Sobic003G105800 Sobic003G244600--Sobic003G105800 Sobic005G216000 Sobic005G216000 Sobic003G244600--Sobic005G216000 Sobic007G186200 Sobic007G186200 Sobic003G244600--Sobic007G186200 Sobic001G015500 Sobic001G015500 Sobic003G244600--Sobic001G015500 Sobic003G244600--Sobic009G226300 Sobic006G030700--Sobic007G187300 Sobic006G030700--Sobic009G226300 Sobic006G030700--Sobic001G249300 Sobic001G150600 Sobic001G150600 Sobic006G030700--Sobic001G150600 Sobic006G030700--Sobic001G280200 Sobic009G054500 Sobic009G054500 Sobic006G030700--Sobic009G054500 Sobic006G100332 Sobic006G100332 Sobic006G030700--Sobic006G100332 Sobic006G030700--Sobic009G029600 Sobic003G087200 Sobic003G087200 Sobic006G030700--Sobic003G087200 Sobic008G182300--Sobic008G182600 Sobic008G182300--Sobic005G169200 Sobic008G182300--Sobic006G132500 Sobic008G182300--Sobic001G145700 Sobic008G182300--Sobic008G182800 Sobic008G182300--Sobic005G169400 Sobic008G182300--Sobic001G145600 Sobic008G182300--Sobic002G023300 Sobic008G182300--Sobic003G244600 Sobic005G018500--Sobic009G054500 Sobic004G260000 Sobic004G260000 Sobic005G018500--Sobic004G260000 Sobic004G255000 Sobic004G255000 Sobic005G018500--Sobic004G255000 Sobic003G259200 Sobic003G259200 Sobic005G018500--Sobic003G259200 Sobic005G018500--Sobic009G226300 Sobic005G018500--Sobic001G249300 Sobic003G148800 Sobic003G148800 Sobic005G018500--Sobic003G148800 Sobic003G219600 Sobic003G219600 Sobic005G018500--Sobic003G219600 Sobic005G018500--Sobic007G187300 Sobic009G226300--Sobic009G054500 Sobic009G226300--Sobic001G249300 Sobic009G226300--Sobic007G187300 Sobic009G226300--Sobic006G030700 Sobic009G226300--Sobic003G148800 Sobic009G226300--Sobic006G100332 Sobic001G325200 Sobic001G325200 Sobic009G226300--Sobic001G325200 Sobic009G226300--Sobic002G304000 Sobic009G226300--Sobic004G260000 Sobic009G181200--Sobic001G145700 Sobic006G117400 Sobic006G117400 Sobic009G181200--Sobic006G117400 Sobic009G181200--Sobic008G182800 Sobic009G181200--Sobic010G230800 Sobic009G181200--Sobic008G182600 Sobic002G065700 Sobic002G065700 Sobic009G181200--Sobic002G065700 Sobic010G230900 Sobic010G230900 Sobic009G181200--Sobic010G230900 Sobic009G181200--Sobic005G169200 Sobic010G020200 Sobic010G020200 Sobic009G181200--Sobic010G020200
Octagon: transcription factors


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