Gene annotation
Transcriptome id Sobic.009G181200.1
Synonym Sb09g024140, CRK25
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
TKL_IRAK_DUF26-la.1 - DUF26 kinases have homology to DUF26 containing loci, expressed
UniProt C5Z094
Pfam PF01657 PF07714
Panther DB PTHR27002 PTHR27002:SF41
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G05200 : cysteine-rich RLK (RECEPTOR-like protein kinase) 25
RAP-DB (Rice) LOC_Os05g41370.1 : TKL_IRAK_DUF26-la.1 - DUF26 kinases have homology to DUF26 containing loci, expressed
MaizeGDB (Corn) Zm00025a044078 , Zm00025a006256 , Zm00025a048337 , Zm00025a048280 , Zm00025a044080
Brachypodium KQK15839 , KQK15905 , KQK15913
Barley HORVU2Hr1G030320.1 , HORVU1Hr1G074310.1 , HORVU1Hr1G074310.2 , HORVU1Hr1G074310.4 , HORVU1Hr1G074310.6 , HORVU1Hr1G074310.8 , HORVU1Hr1G074310.9 , HORVU1Hr1G074310.3 , HORVU1Hr1G074310.5 , HORVU1Hr1G074310.7 , HORVU2Hr1G042550.1 , HORVU2Hr1G042550.2 , HORVU2Hr1G042550.3 , HORVU1Hr1G088580.6 , HORVU1Hr1G088580.7 , HORVU1Hr1G088580.4 , HORVU1Hr1G088580.5 , HORVU1Hr1G088580.2 , HORVU1Hr1G088580.3 , HORVU1Hr1G088580.1 , HORVU1Hr1G074310.12 , HORVU1Hr1G074310.13 , HORVU1Hr1G074310.10 , HORVU1Hr1G074310.11 , HORVU1Hr1G074310.16 , HORVU1Hr1G074310.14 , HORVU1Hr1G074310.15 , HORVU1Hr1G088580.14 , HORVU1Hr1G088580.15 , HORVU1Hr1G088580.10 , HORVU1Hr1G088580.11 , HORVU1Hr1G088580.12 , HORVU1Hr1G088580.13 , HORVU1Hr1G088580.8 , HORVU1Hr1G088580.9 , HORVU5Hr1G111240.4 , HORVU5Hr1G111240.5 , HORVU5Hr1G111240.6 , HORVU5Hr1G111240.7 , HORVU5Hr1G111240.2 , HORVU5Hr1G111240.3 , HORVU5Hr1G111240.8 , HORVU5Hr1G111240.9
Wheat TraesCS1A02G273600 , TraesCS1D02G273700 , TraesCS2A02G211900 , TraesCS1D02G273600 , TraesCS1D02G273600 , TraesCS1D02G273600 , TraesCS1D02G273600 , TraesCS1D02G273600 , TraesCS1D02G273800 , TraesCS1D02G273800 , TraesCS2D02G217600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G145700 thaumatin, putative, expressed -
2 Sobic.006G117400 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
3 Sobic.008G182800 thaumatin, putative, expressed -
4 Sobic.010G230800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
5 Sobic.008G182600 thaumatin, putative, expressed -
6 Sobic.002G065700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
7 Sobic.010G230900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
8 Sobic.005G169200 WIP3 - Wound-induced protein precursor, expressed -
9 Sobic.010G020200 SCP-like extracellular protein, expressed -
10 Sobic.010G231000 Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
11 Sobic.001G145600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thaumatin family domain containing protein, expressed -
12 Sobic.005G126200 Leucine-rich repeat protein 1(PubMedID : 31721651)@BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
13 Sobic.009G073500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
14 Sobic.008G182400 thaumatin, putative, expressed -
15 Sobic.010G172800 down-regulated TF in developmental senescence(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
16 Sobic.008G182300 thaumatin, putative, expressed -
17 Sobic.002G065600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed -
18 Sobic.003G216232 - -
19 Sobic.002G065500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed -
20 Sobic.006G132500 CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase


Gene co-expression network
sample Sobic009G181200 Sobic009G181200 Sobic001G145700 Sobic001G145700 Sobic009G181200--Sobic001G145700 Sobic006G117400 Sobic006G117400 Sobic009G181200--Sobic006G117400 Sobic008G182800 Sobic008G182800 Sobic009G181200--Sobic008G182800 Sobic010G230800 Sobic010G230800 Sobic009G181200--Sobic010G230800 Sobic008G182600 Sobic008G182600 Sobic009G181200--Sobic008G182600 Sobic002G065700 Sobic002G065700 Sobic009G181200--Sobic002G065700 Sobic010G230900 Sobic010G230900 Sobic009G181200--Sobic010G230900 Sobic005G169200 Sobic005G169200 Sobic009G181200--Sobic005G169200 Sobic010G020200 Sobic010G020200 Sobic009G181200--Sobic010G020200 Sobic001G145700--Sobic005G169200 Sobic008G182300 Sobic008G182300 Sobic001G145700--Sobic008G182300 Sobic001G145700--Sobic008G182600 Sobic001G145700--Sobic009G181200 Sobic001G145700--Sobic008G182800 Sobic001G145600 Sobic001G145600 Sobic001G145700--Sobic001G145600 Sobic001G145700--Sobic010G230800 Sobic009G073500 Sobic009G073500 Sobic001G145700--Sobic009G073500 Sobic006G076800 Sobic006G076800 Sobic001G145700--Sobic006G076800 Sobic002G065500 Sobic002G065500 Sobic006G117400--Sobic002G065500 Sobic002G065600 Sobic002G065600 Sobic006G117400--Sobic002G065600 Sobic008G182400 Sobic008G182400 Sobic006G117400--Sobic008G182400 Sobic006G117400--Sobic002G065700 Sobic001G099400 Sobic001G099400 Sobic006G117400--Sobic001G099400 Sobic010G172800 Sobic010G172800 Sobic006G117400--Sobic010G172800 Sobic006G117400--Sobic008G182800 Sobic010G231000 Sobic010G231000 Sobic006G117400--Sobic010G231000 Sobic002G065800 Sobic002G065800 Sobic006G117400--Sobic002G065800 Sobic008G182800--Sobic008G182600 Sobic008G182800--Sobic005G169200 Sobic008G182800--Sobic008G182400 Sobic008G182800--Sobic009G073500 Sobic008G182800--Sobic006G117400 Sobic008G182800--Sobic002G065800 Sobic008G182800--Sobic010G231000 Sobic008G182800--Sobic002G065500 Sobic008G182800--Sobic002G065700 Sobic010G230800--Sobic010G230900 Sobic010G230800--Sobic010G231000 Sobic010G230800--Sobic002G065700 Sobic010G230800--Sobic005G169200 Sobic010G230800--Sobic008G182800 Sobic010G230800--Sobic001G145700 Sobic010G230800--Sobic009G073500 Sobic010G230800--Sobic009G181200 Sobic010G230800--Sobic002G065600 Sobic008G182600--Sobic008G182800 Sobic008G182600--Sobic005G169200 Sobic008G182600--Sobic008G182300 Sobic008G182600--Sobic001G145700 Sobic008G182600--Sobic006G117400 Sobic008G182600--Sobic009G181200 Sobic005G126200 Sobic005G126200 Sobic008G182600--Sobic005G126200 Sobic008G182600--Sobic009G073500 Sobic008G182600--Sobic008G182400 Sobic002G065700--Sobic010G231000 Sobic002G065700--Sobic002G065600 Sobic002G065700--Sobic002G065500 Sobic002G065700--Sobic010G230800 Sobic004G197100 Sobic004G197100 Sobic002G065700--Sobic004G197100 Sobic002G065700--Sobic006G117400 Sobic002G065700--Sobic008G182400 Sobic002G065700--Sobic010G230900 Sobic005G126100 Sobic005G126100 Sobic002G065700--Sobic005G126100 Sobic010G230900--Sobic010G230800 Sobic010G230900--Sobic002G065700 Sobic010G230900--Sobic010G231000 Sobic010G230900--Sobic005G169200 Sobic010G230900--Sobic001G145700 Sobic010G230900--Sobic008G182800 Sobic010G230900--Sobic009G181200 Sobic002G024400 Sobic002G024400 Sobic010G230900--Sobic002G024400 Sobic010G230900--Sobic009G073500 Sobic005G169200--Sobic008G182800 Sobic005G169200--Sobic008G182600 Sobic005G169200--Sobic001G145700 Sobic005G169200--Sobic010G230800 Sobic005G169200--Sobic008G182300 Sobic005G169200--Sobic009G073500 Sobic005G169200--Sobic010G230900 Sobic005G169200--Sobic010G231000 Sobic005G169200--Sobic008G182400 Sobic005G210300 Sobic005G210300 Sobic010G020200--Sobic005G210300 Sobic010G020200--Sobic008G182400 Sobic010G020200--Sobic008G182800 Sobic003G422000 Sobic003G422000 Sobic010G020200--Sobic003G422000 Sobic010G020200--Sobic006G117400 Sobic010G020200--Sobic009G181200 Sobic004G036200 Sobic004G036200 Sobic010G020200--Sobic004G036200 Sobic010G020200--Sobic010G172800 Sobic010G240400 Sobic010G240400 Sobic010G020200--Sobic010G240400
Octagon: transcription factors


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