Gene annotation
Transcriptome id Sobic.010G020200.1
Synonym PR1, ATPR1, Sb10g001940
Functional annotation SCP-like extracellular protein, expressed
UniProt C5Z3A0
Pfam PF00188
Panther DB PTHR10334 PTHR10334:SF195
NCBI CDD KOG3017; Defense-related protein containing SCP domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G14610 : pathogenesis-related gene 1
RAP-DB (Rice) LOC_Os01g28500.1 : SCP-like extracellular protein, expressed
MaizeGDB (Corn) Zm00025a036306 , Zm00025a002913 , Zm00025a044959
Brachypodium KQK02081
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G020200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G210300 - -
2 Sobic.008G182400 thaumatin, putative, expressed -
3 Sobic.008G182800 thaumatin, putative, expressed -
4 Sobic.003G422000 "Glucan endo-1,3-beta-d-glucosidase"(PubMedID : 24906815)@"beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
5 Sobic.006G117400 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
6 Sobic.009G181200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-la.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
7 Sobic.004G036200 SAM dependent carboxyl methyltransferase, putative, expressed -
8 Sobic.010G172800 down-regulated TF in developmental senescence(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.010G240400 beta-expansin precursor, putative, expressed -
10 Sobic.002G065500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed -
11 Sobic.004G197100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@- -
12 Sobic.003G035801 - -
13 Sobic.002G065600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed -
14 Sobic.001G271000 - -
15 Sobic.007G032600 verticillium wilt disease resistance protein, putative, expressed -
16 Sobic.002G022900 OsWAK92 - OsWAK receptor-like protein kinase, expressed K04730: interleukin-1 receptor-associated kinase 1
17 Sobic.001G099400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@proton-dependent oligopeptide transport, putative, expressed -
18 Sobic.005G054300 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
19 Sobic.002G065800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
20 Sobic.004G092300 expressed protein -


Gene co-expression network
sample Sobic010G020200 Sobic010G020200 Sobic005G210300 Sobic005G210300 Sobic010G020200--Sobic005G210300 Sobic008G182400 Sobic008G182400 Sobic010G020200--Sobic008G182400 Sobic008G182800 Sobic008G182800 Sobic010G020200--Sobic008G182800 Sobic003G422000 Sobic003G422000 Sobic010G020200--Sobic003G422000 Sobic006G117400 Sobic006G117400 Sobic010G020200--Sobic006G117400 Sobic009G181200 Sobic009G181200 Sobic010G020200--Sobic009G181200 Sobic004G036200 Sobic004G036200 Sobic010G020200--Sobic004G036200 Sobic010G172800 Sobic010G172800 Sobic010G020200--Sobic010G172800 Sobic010G240400 Sobic010G240400 Sobic010G020200--Sobic010G240400 Sobic001G271000 Sobic001G271000 Sobic005G210300--Sobic001G271000 Sobic009G101600 Sobic009G101600 Sobic005G210300--Sobic009G101600 Sobic005G054300 Sobic005G054300 Sobic005G210300--Sobic005G054300 Sobic009G026400 Sobic009G026400 Sobic005G210300--Sobic009G026400 Sobic005G142200 Sobic005G142200 Sobic005G210300--Sobic005G142200 Sobic005G054600 Sobic005G054600 Sobic005G210300--Sobic005G054600 Sobic002G060500 Sobic002G060500 Sobic005G210300--Sobic002G060500 Sobic005G085100 Sobic005G085100 Sobic005G210300--Sobic005G085100 Sobic004G092300 Sobic004G092300 Sobic005G210300--Sobic004G092300 Sobic002G065500 Sobic002G065500 Sobic008G182400--Sobic002G065500 Sobic002G065800 Sobic002G065800 Sobic008G182400--Sobic002G065800 Sobic002G065600 Sobic002G065600 Sobic008G182400--Sobic002G065600 Sobic005G126100 Sobic005G126100 Sobic008G182400--Sobic005G126100 Sobic001G099400 Sobic001G099400 Sobic008G182400--Sobic001G099400 Sobic008G182400--Sobic010G172800 Sobic004G197100 Sobic004G197100 Sobic008G182400--Sobic004G197100 Sobic010G231000 Sobic010G231000 Sobic008G182400--Sobic010G231000 Sobic008G182400--Sobic006G117400 Sobic008G182600 Sobic008G182600 Sobic008G182800--Sobic008G182600 Sobic005G169200 Sobic005G169200 Sobic008G182800--Sobic005G169200 Sobic008G182800--Sobic008G182400 Sobic009G073500 Sobic009G073500 Sobic008G182800--Sobic009G073500 Sobic008G182800--Sobic006G117400 Sobic008G182800--Sobic002G065800 Sobic008G182800--Sobic010G231000 Sobic008G182800--Sobic002G065500 Sobic002G065700 Sobic002G065700 Sobic008G182800--Sobic002G065700 Sobic008G108900 Sobic008G108900 Sobic003G422000--Sobic008G108900 Sobic006G132200 Sobic006G132200 Sobic003G422000--Sobic006G132200 Sobic002G062300 Sobic002G062300 Sobic003G422000--Sobic002G062300 Sobic007G059300 Sobic007G059300 Sobic003G422000--Sobic007G059300 Sobic009G113600 Sobic009G113600 Sobic003G422000--Sobic009G113600 Sobic002G051400 Sobic002G051400 Sobic003G422000--Sobic002G051400 Sobic005G212600 Sobic005G212600 Sobic003G422000--Sobic005G212600 Sobic007G115000 Sobic007G115000 Sobic003G422000--Sobic007G115000 Sobic007G094600 Sobic007G094600 Sobic003G422000--Sobic007G094600 Sobic006G117400--Sobic002G065500 Sobic006G117400--Sobic002G065600 Sobic006G117400--Sobic008G182400 Sobic006G117400--Sobic002G065700 Sobic006G117400--Sobic001G099400 Sobic006G117400--Sobic010G172800 Sobic006G117400--Sobic008G182800 Sobic006G117400--Sobic010G231000 Sobic006G117400--Sobic002G065800 Sobic001G145700 Sobic001G145700 Sobic009G181200--Sobic001G145700 Sobic009G181200--Sobic006G117400 Sobic009G181200--Sobic008G182800 Sobic010G230800 Sobic010G230800 Sobic009G181200--Sobic010G230800 Sobic009G181200--Sobic008G182600 Sobic009G181200--Sobic002G065700 Sobic010G230900 Sobic010G230900 Sobic009G181200--Sobic010G230900 Sobic009G181200--Sobic005G169200 Sobic009G181200--Sobic010G020200 Sobic004G036200--Sobic005G054300 Sobic004G196500 Sobic004G196500 Sobic004G036200--Sobic004G196500 Sobic004G036200--Sobic009G026400 Sobic009G004700 Sobic009G004700 Sobic004G036200--Sobic009G004700 Sobic004G036200--Sobic003G422000 Sobic010G068200 Sobic010G068200 Sobic004G036200--Sobic010G068200 Sobic004G036200--Sobic005G054600 Sobic004G036200--Sobic005G212600 Sobic004G036200--Sobic005G210300 Sobic010G172800--Sobic005G126100 Sobic010G172800--Sobic002G065500 Sobic010G172800--Sobic008G182400 Sobic010G172800--Sobic002G065600 Sobic010G172800--Sobic010G231000 Sobic010G172800--Sobic001G099400 Sobic010G172800--Sobic002G065800 Sobic003G035801 Sobic003G035801 Sobic010G172800--Sobic003G035801 Sobic010G172800--Sobic006G117400 Sobic010G240400--Sobic009G073500 Sobic010G240400--Sobic010G231000 Sobic010G240400--Sobic005G126100 Sobic005G084300 Sobic005G084300 Sobic010G240400--Sobic005G084300 Sobic008G146700 Sobic008G146700 Sobic010G240400--Sobic008G146700 Sobic010G240400--Sobic010G172800 Sobic007G059100 Sobic007G059100 Sobic010G240400--Sobic007G059100 Sobic001G291600 Sobic001G291600 Sobic010G240400--Sobic001G291600 Sobic010G240400--Sobic008G182400
Octagon: transcription factors


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