Gene annotation
Transcriptome id Sobic.003G422000.1
Synonym Sb03g045490,
Functional annotation "Glucan endo-1,3-beta-d-glucosidase" (PubMedID : 24906815)
"beta-1,3-glucanase " (PubMedID : 25311645)
glycosyl hydrolases family 17, putative, expressed
UniProt C5XHS1
Pfam PF00332
Panther DB PTHR32227 PTHR32227:SF94
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT4G16260 : Glycosyl hydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g71670.1 : glycosyl hydrolases family 17, putative, expressed
MaizeGDB (Corn) Zm00025a039154 , Zm00025a026061
Brachypodium KQK11472 , KQK11473 , KQK11471 , KQK10191
Barley HORVU3Hr1G078520.1 , HORVU3Hr1G078520.3 , HORVU3Hr1G078520.2 , HORVU7Hr1G120450.3 , HORVU7Hr1G120450.2 , HORVU7Hr1G120450.1 , HORVU7Hr1G120450.5 , HORVU7Hr1G120450.4 , HORVU3Hr1G105600.1
Wheat TraesCS3A02G330500 , TraesCS3B02G360500 , TraesCS3B02G360500 , TraesCS7D02G552500 , TraesCS2D02G172400 , TraesCS3A02G483000 , TraesCS3B02G529300 , TraesCS3D02G478300 , TraesCS3D02G478000 , TraesCS3B02G528400 , TraesCS3D02G323900 , TraesCS3A02G481500
Populus -


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cDNA sequences
Sobic.003G422000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G108900 GRF zinc finger family protein, expressed -
2 Sobic.006G132200 CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
3 Sobic.002G062300 expressed protein -
4 Sobic.007G059300 - -
5 Sobic.009G113600 - -
6 Sobic.002G051400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
7 Sobic.005G212600 NBS-LRR disease resistance protein, putative, expressed -
8 Sobic.007G115000 - -
9 Sobic.007G094600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450 protein, putative, expressed -
10 Sobic.009G004700 stripe rust resistance protein Yr10, putative, expressed -
11 Sobic.002G051450 - -
12 Sobic.003G176100 expressed protein -
13 Sobic.009G196700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
14 Sobic.006G273100 - -
15 Sobic.009G109450 - -
16 Sobic.001G498200 YT521-B-like family domain containing protein, expressed -
17 Sobic.010G131200 glycine rich protein family protein, putative, expressed -
18 Sobic.004G256600 KH domain containing protein, putative, expressed K14945: protein quaking
19 Sobic.009G110366 - -
20 Sobic.009G026400 - -


Gene co-expression network
sample Sobic003G422000 Sobic003G422000 Sobic008G108900 Sobic008G108900 Sobic003G422000--Sobic008G108900 Sobic006G132200 Sobic006G132200 Sobic003G422000--Sobic006G132200 Sobic002G062300 Sobic002G062300 Sobic003G422000--Sobic002G062300 Sobic007G059300 Sobic007G059300 Sobic003G422000--Sobic007G059300 Sobic009G113600 Sobic009G113600 Sobic003G422000--Sobic009G113600 Sobic002G051400 Sobic002G051400 Sobic003G422000--Sobic002G051400 Sobic005G212600 Sobic005G212600 Sobic003G422000--Sobic005G212600 Sobic007G115000 Sobic007G115000 Sobic003G422000--Sobic007G115000 Sobic007G094600 Sobic007G094600 Sobic003G422000--Sobic007G094600 Sobic008G108900--Sobic006G132200 Sobic009G196700 Sobic009G196700 Sobic008G108900--Sobic009G196700 Sobic008G108900--Sobic002G062300 Sobic008G108900--Sobic009G113600 Sobic008G108900--Sobic007G059300 Sobic008G108900--Sobic005G212600 Sobic003G176100 Sobic003G176100 Sobic008G108900--Sobic003G176100 Sobic008G108900--Sobic002G051400 Sobic003G031750 Sobic003G031750 Sobic008G108900--Sobic003G031750 Sobic006G132200--Sobic008G108900 Sobic006G132200--Sobic009G196700 Sobic006G132200--Sobic002G062300 Sobic006G132200--Sobic009G113600 Sobic006G132200--Sobic005G212600 Sobic006G132200--Sobic007G059300 Sobic006G132200--Sobic003G031750 Sobic008G091900 Sobic008G091900 Sobic006G132200--Sobic008G091900 Sobic008G031350 Sobic008G031350 Sobic006G132200--Sobic008G031350 Sobic002G062300--Sobic009G113600 Sobic002G062300--Sobic007G059300 SobicK024000 SobicK024000 Sobic002G062300--SobicK024000 Sobic002G062300--Sobic005G212600 Sobic002G062300--Sobic003G031750 Sobic008G009500 Sobic008G009500 Sobic002G062300--Sobic008G009500 Sobic002G062300--Sobic008G108900 Sobic002G062300--Sobic009G196700 Sobic001G253100 Sobic001G253100 Sobic002G062300--Sobic001G253100 Sobic007G059300--Sobic002G062300 Sobic007G059300--Sobic009G113600 Sobic007G059300--Sobic009G196700 Sobic007G059300--Sobic003G031750 Sobic007G059300--SobicK024000 Sobic007G059300--Sobic008G108900 Sobic009G026400 Sobic009G026400 Sobic007G059300--Sobic009G026400 Sobic007G059300--Sobic006G132200 Sobic007G059300--Sobic002G051400 Sobic009G113600--Sobic002G062300 Sobic009G113600--Sobic007G059300 Sobic009G113600--SobicK024000 Sobic009G113600--Sobic009G196700 Sobic009G113600--Sobic008G009500 Sobic009G113600--Sobic008G108900 Sobic009G113600--Sobic003G031750 Sobic009G113600--Sobic008G031350 Sobic010G146200 Sobic010G146200 Sobic009G113600--Sobic010G146200 Sobic002G051400--Sobic009G113600 Sobic002G051400--Sobic007G059300 Sobic002G051400--Sobic008G108900 Sobic002G051400--Sobic002G062300 Sobic002G051400--Sobic003G176100 Sobic002G051400--Sobic009G196700 Sobic002G051400--Sobic010G146200 Sobic002G051400--SobicK024000 Sobic002G051400--Sobic008G009500 Sobic005G212600--Sobic002G062300 Sobic005G212600--Sobic001G253100 Sobic005G212600--Sobic009G113600 Sobic005G212600--Sobic006G132200 Sobic005G212600--Sobic008G108900 Sobic005G212600--Sobic008G091900 Sobic002G221200 Sobic002G221200 Sobic005G212600--Sobic002G221200 Sobic005G212600--Sobic008G009500 Sobic005G212600--SobicK024000 Sobic007G115000--Sobic005G212600 Sobic002G285200 Sobic002G285200 Sobic007G115000--Sobic002G285200 Sobic007G115000--Sobic001G253100 Sobic007G115000--Sobic008G091900 Sobic007G115000--Sobic006G132200 Sobic007G115000--Sobic002G062300 Sobic004G164650 Sobic004G164650 Sobic007G115000--Sobic004G164650 Sobic008G036500 Sobic008G036500 Sobic007G115000--Sobic008G036500 Sobic005G117801 Sobic005G117801 Sobic007G115000--Sobic005G117801 Sobic006G020500 Sobic006G020500 Sobic007G094600--Sobic006G020500 Sobic006G020600 Sobic006G020600 Sobic007G094600--Sobic006G020600 Sobic002G314600 Sobic002G314600 Sobic007G094600--Sobic002G314600 Sobic007G094600--Sobic002G051400 Sobic010G091700 Sobic010G091700 Sobic007G094600--Sobic010G091700 Sobic009G078500 Sobic009G078500 Sobic007G094600--Sobic009G078500 Sobic008G124100 Sobic008G124100 Sobic007G094600--Sobic008G124100 Sobic007G094600--Sobic003G422000 Sobic007G094600--Sobic008G108900
Octagon: transcription factors


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