Gene annotation
Transcriptome id Sobic.009G161401.1
Synonym -
Functional annotation -
UniProt A0A1Z5R2X5
Pfam -
Panther DB PTHR34670 PTHR34670:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G02090 : -
RAP-DB (Rice) LOC_Os05g38264.1 : expressed protein
MaizeGDB (Corn) Zm00025a037177
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G229200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 72A1, putative, expressed K07424: cytochrome P450 family 3 subfamily A
2 Sobic.002G155400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed -
3 Sobic.001G302500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed -
4 Sobic.009G172500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@aminotransferase, putative, expressed K00827: alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase
5 Sobic.002G024100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase, putative, expressed -
6 Sobic.004G311000 integral membrane protein DUF6 containing protein, expressed -
7 Sobic.003G080900 Ser/Thr protein kinase, putative, expressed -
8 Sobic.003G273700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
9 Sobic.004G074500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2
10 Sobic.009G084300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphorylase domain containing protein, putative, expressed -
11 Sobic.005G152200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K00815: tyrosine aminotransferase
12 Sobic.001G386400 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
13 Sobic.010G206000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed -
14 Sobic.009G004200 MAC/Perforin domain containing protein, putative, expressed -
15 Sobic.010G220600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
16 Sobic.002G283900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.004G246200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dihydroorotate dihydrogenase protein, putative, expressed K00207: dihydropyrimidine dehydrogenase (NADP+)
18 Sobic.002G322900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@integral membrane protein DUF6 containing protein, expressed -
19 Sobic.006G096400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
20 Sobic.009G177400 leucine-rich repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic009G161401 Sobic009G161401 Sobic003G229200 Sobic003G229200 Sobic009G161401--Sobic003G229200 Sobic002G155400 Sobic002G155400 Sobic009G161401--Sobic002G155400 Sobic001G302500 Sobic001G302500 Sobic009G161401--Sobic001G302500 Sobic009G172500 Sobic009G172500 Sobic009G161401--Sobic009G172500 Sobic002G024100 Sobic002G024100 Sobic009G161401--Sobic002G024100 Sobic004G311000 Sobic004G311000 Sobic009G161401--Sobic004G311000 Sobic003G080900 Sobic003G080900 Sobic009G161401--Sobic003G080900 Sobic003G273700 Sobic003G273700 Sobic009G161401--Sobic003G273700 Sobic004G074500 Sobic004G074500 Sobic009G161401--Sobic004G074500 Sobic003G229200--Sobic009G161401 Sobic003G229200--Sobic001G302500 Sobic006G096400 Sobic006G096400 Sobic003G229200--Sobic006G096400 Sobic003G229200--Sobic002G024100 Sobic003G229200--Sobic003G273700 Sobic003G229200--Sobic003G080900 Sobic004G347300 Sobic004G347300 Sobic003G229200--Sobic004G347300 Sobic007G078100 Sobic007G078100 Sobic003G229200--Sobic007G078100 Sobic005G152200 Sobic005G152200 Sobic003G229200--Sobic005G152200 Sobic001G386400 Sobic001G386400 Sobic002G155400--Sobic001G386400 Sobic002G155400--Sobic009G161401 Sobic006G119200 Sobic006G119200 Sobic002G155400--Sobic006G119200 Sobic008G044000 Sobic008G044000 Sobic002G155400--Sobic008G044000 Sobic002G322900 Sobic002G322900 Sobic002G155400--Sobic002G322900 Sobic010G206000 Sobic010G206000 Sobic002G155400--Sobic010G206000 Sobic001G512800 Sobic001G512800 Sobic002G155400--Sobic001G512800 Sobic004G341200 Sobic004G341200 Sobic002G155400--Sobic004G341200 Sobic004G106900 Sobic004G106900 Sobic002G155400--Sobic004G106900 Sobic001G302500--Sobic003G273700 Sobic001G062500 Sobic001G062500 Sobic001G302500--Sobic001G062500 Sobic002G185800 Sobic002G185800 Sobic001G302500--Sobic002G185800 Sobic002G283900 Sobic002G283900 Sobic001G302500--Sobic002G283900 Sobic006G256900 Sobic006G256900 Sobic001G302500--Sobic006G256900 Sobic009G219200 Sobic009G219200 Sobic001G302500--Sobic009G219200 Sobic010G148800 Sobic010G148800 Sobic001G302500--Sobic010G148800 Sobic003G140700 Sobic003G140700 Sobic001G302500--Sobic003G140700 Sobic001G438200 Sobic001G438200 Sobic001G302500--Sobic001G438200 Sobic009G172500--Sobic006G096400 Sobic010G016400 Sobic010G016400 Sobic009G172500--Sobic010G016400 Sobic009G172500--Sobic010G206000 Sobic009G172500--Sobic002G322900 Sobic002G381300 Sobic002G381300 Sobic009G172500--Sobic002G381300 Sobic009G016800 Sobic009G016800 Sobic009G172500--Sobic009G016800 Sobic005G139400 Sobic005G139400 Sobic009G172500--Sobic005G139400 Sobic009G172500--Sobic002G024100 Sobic009G172500--Sobic009G161401 Sobic002G024100--Sobic005G152200 Sobic002G024100--Sobic001G386400 Sobic003G280900 Sobic003G280900 Sobic002G024100--Sobic003G280900 Sobic002G024100--Sobic006G096400 Sobic002G242500 Sobic002G242500 Sobic002G024100--Sobic002G242500 Sobic002G024100--Sobic003G229200 Sobic002G024100--Sobic010G016400 Sobic009G167700 Sobic009G167700 Sobic002G024100--Sobic009G167700 Sobic002G024100--Sobic009G172500 Sobic009G073800 Sobic009G073800 Sobic004G311000--Sobic009G073800 Sobic004G311000--Sobic009G161401 Sobic004G311000--Sobic003G229200 Sobic004G311000--Sobic001G302500 Sobic002G017600 Sobic002G017600 Sobic004G311000--Sobic002G017600 Sobic004G311000--Sobic007G078100 Sobic002G257300 Sobic002G257300 Sobic004G311000--Sobic002G257300 Sobic004G311000--Sobic002G185800 Sobic010G220600 Sobic010G220600 Sobic004G311000--Sobic010G220600 Sobic002G117900 Sobic002G117900 Sobic003G080900--Sobic002G117900 Sobic009G084300 Sobic009G084300 Sobic003G080900--Sobic009G084300 Sobic003G080900--Sobic003G229200 Sobic007G120000 Sobic007G120000 Sobic003G080900--Sobic007G120000 Sobic003G080900--Sobic009G161401 Sobic003G080900--Sobic002G155400 Sobic003G080900--Sobic003G273700 Sobic003G080900--Sobic004G106900 Sobic007G196300 Sobic007G196300 Sobic003G080900--Sobic007G196300 Sobic003G273700--Sobic001G302500 Sobic010G192432 Sobic010G192432 Sobic003G273700--Sobic010G192432 Sobic010G194100 Sobic010G194100 Sobic003G273700--Sobic010G194100 Sobic006G230300 Sobic006G230300 Sobic003G273700--Sobic006G230300 Sobic003G273700--Sobic002G283900 Sobic007G221100 Sobic007G221100 Sobic003G273700--Sobic007G221100 Sobic003G389000 Sobic003G389000 Sobic003G273700--Sobic003G389000 Sobic001G456100 Sobic001G456100 Sobic003G273700--Sobic001G456100 Sobic010G161450 Sobic010G161450 Sobic003G273700--Sobic010G161450 Sobic003G085300 Sobic003G085300 Sobic004G074500--Sobic003G085300 Sobic002G090200 Sobic002G090200 Sobic004G074500--Sobic002G090200 Sobic004G308000 Sobic004G308000 Sobic004G074500--Sobic004G308000 Sobic007G003200 Sobic007G003200 Sobic004G074500--Sobic007G003200 Sobic004G246200 Sobic004G246200 Sobic004G074500--Sobic004G246200 Sobic001G101400 Sobic001G101400 Sobic004G074500--Sobic001G101400 Sobic010G016800 Sobic010G016800 Sobic004G074500--Sobic010G016800 Sobic001G212000 Sobic001G212000 Sobic004G074500--Sobic001G212000 Sobic006G140000 Sobic006G140000 Sobic004G074500--Sobic006G140000
Octagon: transcription factors


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