Gene annotation
Transcriptome id Sobic.010G206000.1
Synonym Sb10g025330
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
transmembrane amino acid transporter protein, putative, expressed
UniProt C5Z6Q3
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF237
NCBI CDD KOG1305; Amino acid transporter protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G80510 : Transmembrane amino acid transporter family protein
RAP-DB (Rice) LOC_Os06g43700.1 : transmembrane amino acid transporter protein, putative, expressed
MaizeGDB (Corn) Zm00025a032604 , Zm00025a051388
Brachypodium KQK16786 , KQK01511
Barley HORVU7Hr1G115450.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G512800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
2 Sobic.004G246200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dihydroorotate dihydrogenase protein, putative, expressed K00207: dihydropyrimidine dehydrogenase (NADP+)
3 Sobic.001G488500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"OsFBK12(Ortholog in rice:Chen et al., 2013)"(PubMedID : 31659851)@OsFBK12 - F-box domain and kelch repeat containing protein, expressed -
4 Sobic.002G322900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@integral membrane protein DUF6 containing protein, expressed -
5 Sobic.001G305800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@U-box domain containing protein, expressed -
6 Sobic.002G155400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed -
7 Sobic.001G412700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@IN2-1 protein, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.004G255000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aspartic proteinase nepenthesin-2 precursor, putative, expressed -
9 Sobic.005G018500 NAC domain transcription factor, putative, expressed -
10 Sobic.005G152100 aminotransferase, classes I and II, domain containing protein, expressed K00815: tyrosine aminotransferase
11 Sobic.004G236600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBK10 - F-box domain and kelch repeat containing protein, expressed -
12 Sobic.003G138200 expressed protein -
13 Sobic.003G259200 -(PubMedID : 26976818)@uncharacterized kinase mug58, putative, expressed K15918: D-glycerate 3-kinase
14 Sobic.004G341200 Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)
15 Sobic.005G079900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@F-box domain containing protein, expressed -
16 Sobic.001G249300 Cf2/Cf5 disease resistance protein, putative, expressed -
17 Sobic.009G054500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@lipase, putative, expressed -
18 Sobic.003G269700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@SAM dependent carboxyl methyltransferase, putative, expressed -
19 Sobic.004G333200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
20 Sobic.004G260000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic010G206000 Sobic010G206000 Sobic001G512800 Sobic001G512800 Sobic010G206000--Sobic001G512800 Sobic004G246200 Sobic004G246200 Sobic010G206000--Sobic004G246200 Sobic001G488500 Sobic001G488500 Sobic010G206000--Sobic001G488500 Sobic002G322900 Sobic002G322900 Sobic010G206000--Sobic002G322900 Sobic001G305800 Sobic001G305800 Sobic010G206000--Sobic001G305800 Sobic002G155400 Sobic002G155400 Sobic010G206000--Sobic002G155400 Sobic001G412700 Sobic001G412700 Sobic010G206000--Sobic001G412700 Sobic004G255000 Sobic004G255000 Sobic010G206000--Sobic004G255000 Sobic005G018500 Sobic005G018500 Sobic010G206000--Sobic005G018500 Sobic003G138200 Sobic003G138200 Sobic001G512800--Sobic003G138200 Sobic001G512800--Sobic002G322900 Sobic001G512800--Sobic010G206000 Sobic001G512800--Sobic004G246200 Sobic002G409500 Sobic002G409500 Sobic001G512800--Sobic002G409500 Sobic009G029600 Sobic009G029600 Sobic001G512800--Sobic009G029600 Sobic010G248900 Sobic010G248900 Sobic001G512800--Sobic010G248900 Sobic009G054500 Sobic009G054500 Sobic001G512800--Sobic009G054500 Sobic005G079900 Sobic005G079900 Sobic001G512800--Sobic005G079900 Sobic005G152100 Sobic005G152100 Sobic004G246200--Sobic005G152100 Sobic004G246200--Sobic005G018500 Sobic003G259200 Sobic003G259200 Sobic004G246200--Sobic003G259200 Sobic004G246200--Sobic004G255000 Sobic004G246200--Sobic001G412700 Sobic004G260000 Sobic004G260000 Sobic004G246200--Sobic004G260000 Sobic004G246200--Sobic002G322900 Sobic004G246200--Sobic009G054500 Sobic008G024400 Sobic008G024400 Sobic004G246200--Sobic008G024400 Sobic004G236600 Sobic004G236600 Sobic001G488500--Sobic004G236600 Sobic001G488500--Sobic005G152100 Sobic001G488500--Sobic004G246200 Sobic005G231900 Sobic005G231900 Sobic001G488500--Sobic005G231900 Sobic001G488500--Sobic002G322900 Sobic001G488500--Sobic004G255000 Sobic001G488500--Sobic005G079900 Sobic001G488500--Sobic010G206000 Sobic005G215900 Sobic005G215900 Sobic001G488500--Sobic005G215900 Sobic002G322900--Sobic004G236600 Sobic002G322900--Sobic005G152100 Sobic002G322900--Sobic004G246200 Sobic002G322900--Sobic001G512800 Sobic002G322900--Sobic001G412700 Sobic004G341200 Sobic004G341200 Sobic002G322900--Sobic004G341200 Sobic002G322900--Sobic004G255000 Sobic002G322900--Sobic001G488500 Sobic002G322900--Sobic010G206000 Sobic005G178100 Sobic005G178100 Sobic001G305800--Sobic005G178100 Sobic006G030700 Sobic006G030700 Sobic001G305800--Sobic006G030700 Sobic001G150600 Sobic001G150600 Sobic001G305800--Sobic001G150600 Sobic009G161000 Sobic009G161000 Sobic001G305800--Sobic009G161000 Sobic006G100332 Sobic006G100332 Sobic001G305800--Sobic006G100332 Sobic003G087200 Sobic003G087200 Sobic001G305800--Sobic003G087200 Sobic009G226300 Sobic009G226300 Sobic001G305800--Sobic009G226300 Sobic001G305800--Sobic009G054500 Sobic007G092900 Sobic007G092900 Sobic001G305800--Sobic007G092900 Sobic001G386400 Sobic001G386400 Sobic002G155400--Sobic001G386400 Sobic009G161401 Sobic009G161401 Sobic002G155400--Sobic009G161401 Sobic006G119200 Sobic006G119200 Sobic002G155400--Sobic006G119200 Sobic008G044000 Sobic008G044000 Sobic002G155400--Sobic008G044000 Sobic002G155400--Sobic002G322900 Sobic002G155400--Sobic010G206000 Sobic002G155400--Sobic001G512800 Sobic002G155400--Sobic004G341200 Sobic004G106900 Sobic004G106900 Sobic002G155400--Sobic004G106900 Sobic001G412700--Sobic004G255000 Sobic001G412700--Sobic003G259200 Sobic001G412700--Sobic005G152100 Sobic003G269700 Sobic003G269700 Sobic001G412700--Sobic003G269700 Sobic001G412700--Sobic004G246200 Sobic001G212000 Sobic001G212000 Sobic001G412700--Sobic001G212000 Sobic001G412700--Sobic009G029600 Sobic001G412700--Sobic002G322900 Sobic001G412700--Sobic005G018500 Sobic004G255000--Sobic009G029600 Sobic004G255000--Sobic005G018500 Sobic001G249300 Sobic001G249300 Sobic004G255000--Sobic001G249300 Sobic004G255000--Sobic009G054500 Sobic001G280200 Sobic001G280200 Sobic004G255000--Sobic001G280200 Sobic004G255000--Sobic003G259200 Sobic004G255000--Sobic004G260000 Sobic003G219600 Sobic003G219600 Sobic004G255000--Sobic003G219600 Sobic004G255000--Sobic005G152100 Sobic005G018500--Sobic009G054500 Sobic005G018500--Sobic004G260000 Sobic005G018500--Sobic004G255000 Sobic005G018500--Sobic003G259200 Sobic005G018500--Sobic009G226300 Sobic005G018500--Sobic001G249300 Sobic003G148800 Sobic003G148800 Sobic005G018500--Sobic003G148800 Sobic005G018500--Sobic003G219600 Sobic007G187300 Sobic007G187300 Sobic005G018500--Sobic007G187300
Octagon: transcription factors


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