Gene annotation
Transcriptome id Sobic.009G177400.1
Synonym
Functional annotation leucine-rich repeat family protein, putative, expressed
UniProt A0A1B6P9I0
Pfam PF08263 PF13855 PF07714
Panther DB PTHR27003 PTHR27003:SF113
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G79620 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os05g40770.1 : leucine-rich repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a033734 , Zm00025a006315 , Zm00025a002306 , Zm00025a038864 , Zm00025a037383 , Zm00025a008603 , Zm00025a044046 , Zm00025a025101 , Zm00025a006146
Brachypodium PNT73106 , PNT73321 , KQJ85665 , KQJ90669 , KQK21860 , KQK07298 , KQJ86265 , KQK05701 , KQJ98144 , KQK15277 , KQK11777
Barley HORVU3Hr1G017020.30 , HORVU1Hr1G069100.17 , HORVU1Hr1G069100.16 , HORVU1Hr1G069100.15 , HORVU1Hr1G069100.14 , HORVU1Hr1G069100.13 , HORVU1Hr1G069100.12 , HORVU1Hr1G069100.11 , HORVU1Hr1G069100.10 , HORVU1Hr1G069100.19 , HORVU1Hr1G069100.18 , HORVU7Hr1G048140.2 , HORVU7Hr1G048140.3 , HORVU7Hr1G048140.4 , HORVU3Hr1G022780.2 , HORVU3Hr1G022780.3 , HORVU3Hr1G022780.6 , HORVU3Hr1G022780.7 , HORVU3Hr1G022780.4 , HORVU3Hr1G022780.5 , HORVU3Hr1G022780.9 , HORVU3Hr1G001400.1 , HORVU4Hr1G051120.37 , HORVU4Hr1G051120.39 , HORVU4Hr1G051120.38 , HORVU3Hr1G017020.3 , HORVU3Hr1G017020.19 , HORVU3Hr1G017020.18 , HORVU3Hr1G017020.17 , HORVU3Hr1G017020.16 , HORVU3Hr1G017020.15 , HORVU3Hr1G017020.14 , HORVU3Hr1G017020.13 , HORVU3Hr1G017020.12 , HORVU3Hr1G017020.11 , HORVU3Hr1G017020.10 , HORVU3Hr1G080330.7 , HORVU3Hr1G080330.6 , HORVU3Hr1G080330.4 , HORVU3Hr1G080330.3 , HORVU3Hr1G080330.2 , HORVU3Hr1G080330.9 , HORVU3Hr1G080330.8 , HORVU4Hr1G051120.28 , HORVU4Hr1G051120.29 , HORVU4Hr1G051120.22 , HORVU4Hr1G051120.23 , HORVU4Hr1G051120.21 , HORVU4Hr1G051120.27 , HORVU4Hr1G051120.24 , HORVU4Hr1G051120.25 , HORVU4Hr1G084510.1 , HORVU4Hr1G084510.2 , HORVU4Hr1G084510.3 , HORVU4Hr1G084510.4 , HORVU3Hr1G017020.31 , HORVU3Hr1G017020.32 , HORVU3Hr1G017020.35 , HORVU6Hr1G032540.10 , HORVU4Hr1G051120.42 , HORVU4Hr1G051120.43 , HORVU3Hr1G080330.24 , HORVU3Hr1G080330.25 , HORVU3Hr1G080330.23 , HORVU5Hr1G071340.5 , HORVU5Hr1G071340.6 , HORVU5Hr1G071340.1 , HORVU5Hr1G071340.2 , HORVU4Hr1G051120.3 , HORVU4Hr1G051120.1 , HORVU4Hr1G051120.7 , HORVU4Hr1G051120.4 , HORVU4Hr1G051120.9 , HORVU3Hr1G017020.33 , HORVU3Hr1G017020.34 , HORVU3Hr1G017020.36 , HORVU3Hr1G016360.2 , HORVU3Hr1G016360.1 , HORVU1Hr1G069100.9 , HORVU1Hr1G069100.8 , HORVU1Hr1G069100.7 , HORVU1Hr1G069100.6 , HORVU1Hr1G069100.5 , HORVU1Hr1G069100.4 , HORVU1Hr1G069100.3 , HORVU1Hr1G069100.2 , HORVU1Hr1G069100.1 , HORVU1Hr1G069100.26 , HORVU1Hr1G069100.27 , HORVU1Hr1G069100.24 , HORVU1Hr1G069100.25 , HORVU1Hr1G069100.22 , HORVU1Hr1G069100.20 , HORVU1Hr1G069100.21 , HORVU6Hr1G058280.4 , HORVU6Hr1G058280.1 , HORVU5Hr1G107330.2 , HORVU5Hr1G107330.1 , HORVU7Hr1G048140.5 , HORVU7Hr1G048140.6 , HORVU1Hr1G095340.6 , HORVU1Hr1G095340.4 , HORVU1Hr1G095340.2 , HORVU1Hr1G095340.3 , HORVU1Hr1G095340.1 , HORVU4Hr1G051120.13 , HORVU4Hr1G051120.12 , HORVU4Hr1G051120.11 , HORVU4Hr1G051120.19 , HORVU6Hr1G032540.4 , HORVU6Hr1G032540.5 , HORVU6Hr1G032540.6 , HORVU6Hr1G032540.7 , HORVU6Hr1G032540.1 , HORVU6Hr1G032540.2 , HORVU6Hr1G032540.3 , HORVU6Hr1G032540.8 , HORVU6Hr1G032540.9 , HORVU6Hr1G081330.3 , HORVU6Hr1G081330.2 , HORVU6Hr1G081330.4 , HORVU2Hr1G020420.1 , HORVU2Hr1G020420.2 , HORVU2Hr1G020420.3 , HORVU2Hr1G020420.4 , HORVU4Hr1G051120.36 , HORVU4Hr1G051120.31 , HORVU4Hr1G051120.30 , HORVU5Hr1G021940.1 , HORVU5Hr1G021940.7 , HORVU5Hr1G021940.6 , HORVU5Hr1G021940.5 , HORVU5Hr1G021940.4 , HORVU3Hr1G001390.1 , HORVU3Hr1G080330.19 , HORVU3Hr1G080330.14 , HORVU3Hr1G080330.12 , HORVU3Hr1G080330.10 , HORVU3Hr1G017020.26 , HORVU3Hr1G017020.27 , HORVU3Hr1G017020.24 , HORVU3Hr1G017020.25 , HORVU3Hr1G017020.22 , HORVU3Hr1G017020.23 , HORVU3Hr1G017020.20 , HORVU3Hr1G017020.21 , HORVU3Hr1G017020.28 , HORVU3Hr1G017020.29 , HORVU3Hr1G017020.7 , HORVU3Hr1G017020.6 , HORVU3Hr1G017020.5 , HORVU3Hr1G017020.4 , HORVU3Hr1G017020.2 , HORVU3Hr1G017020.1 , HORVU3Hr1G017020.9 , HORVU3Hr1G017020.8
Wheat TraesCS6D02G316600 , TraesCS7A02G091300 , TraesCS1D02G303700 , TraesCS7A02G234800 , TraesCS3B02G371700 , TraesCS4D02G175200 , TraesCS4D02G175200 , TraesCS7D02G521200 , TraesCS7D02G521200 , TraesCS3A02G538300 , TraesCS3A02G340100 , TraesCS4A02G131500 , TraesCS7D02G165300 , TraesCS2A02G118300 , TraesCS3A02G092300 , TraesCS5B02G089800 , TraesCS7D02G234800 , TraesCS7D02G234800 , TraesCS3D02G333600 , TraesCS4B02G173100 , TraesCS4B02G173100 , TraesCS3D02G095200 , TraesCS7A02G533800 , TraesCS3D02G535700 , TraesCS3A02G122300 , TraesCS6B02G284500 , TraesCS2B02G138400 , TraesCS3D02G543900 , TraesCS3D02G543900 , TraesCS1A02G304200 , TraesCS7B02G133000 , TraesCS3A02G530200 , TraesCS6A02G240100 , TraesCS7B02G069100 , TraesCS6D02G222400 , TraesCS3B02G603800 , TraesCS5B02G253700 , TraesCS1B02G314700 , TraesCS6B02G367100 , TraesCS2D02G116700 , TraesCS5A02G084200 , TraesCS5D02G096200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G114800 CDPK - calcium-dependent protein kinase 18(PubMedID : 31721651)@CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
2 Sobic.008G144401 - -
3 Sobic.002G258100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
4 Sobic.008G107500 WRKY96, expressed -
5 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
6 Sobic.010G274500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@catalase isozyme B, putative, expressed K03781: katE, CAT, catB, catalase
7 Sobic.002G175500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
8 Sobic.004G163300 protein kinase domain containing protein, expressed K14510: serine/threonine-protein kinase CTR1
9 Sobic.007G098400 tyrosine protein kinase domain containing protein, putative, expressed -
10 Sobic.001G540100 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
11 Sobic.010G188400 copine-1, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
12 Sobic.001G049200 AMP-binding enzyme, putative, expressed -
13 Sobic.006G239800 FGGY family of carbohydrate kinases, putative, expressed K00864: glpK, glycerol kinase
14 Sobic.006G176600 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
15 Sobic.005G024900 major facilitator superfamily antiporter, putative, expressed -
16 Sobic.009G102300 hydrolase, acting on glycosyl bonds, putative, expressed K01227: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
17 Sobic.001G148300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
18 Sobic.001G328000 phenazine biosynthesis protein, putative, expressed -
19 Sobic.004G021300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
20 Sobic.006G119200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase


Gene co-expression network
sample Sobic009G177400 Sobic009G177400 Sobic002G114800 Sobic002G114800 Sobic009G177400--Sobic002G114800 Sobic008G144401 Sobic008G144401 Sobic009G177400--Sobic008G144401 Sobic002G258100 Sobic002G258100 Sobic009G177400--Sobic002G258100 Sobic008G107500 Sobic008G107500 Sobic009G177400--Sobic008G107500 Sobic003G354400 Sobic003G354400 Sobic009G177400--Sobic003G354400 Sobic010G274500 Sobic010G274500 Sobic009G177400--Sobic010G274500 Sobic002G175500 Sobic002G175500 Sobic009G177400--Sobic002G175500 Sobic004G163300 Sobic004G163300 Sobic009G177400--Sobic004G163300 Sobic007G098400 Sobic007G098400 Sobic009G177400--Sobic007G098400 Sobic001G049200 Sobic001G049200 Sobic002G114800--Sobic001G049200 Sobic002G114800--Sobic009G177400 Sobic001G328000 Sobic001G328000 Sobic002G114800--Sobic001G328000 Sobic002G114800--Sobic004G163300 Sobic004G173600 Sobic004G173600 Sobic002G114800--Sobic004G173600 Sobic009G102300 Sobic009G102300 Sobic002G114800--Sobic009G102300 Sobic002G306700 Sobic002G306700 Sobic002G114800--Sobic002G306700 Sobic005G134600 Sobic005G134600 Sobic002G114800--Sobic005G134600 Sobic001G540100 Sobic001G540100 Sobic002G114800--Sobic001G540100 Sobic008G144401--Sobic003G354400 Sobic008G144401--Sobic009G177400 Sobic003G329400 Sobic003G329400 Sobic008G144401--Sobic003G329400 Sobic003G061800 Sobic003G061800 Sobic008G144401--Sobic003G061800 Sobic003G005800 Sobic003G005800 Sobic008G144401--Sobic003G005800 Sobic008G147700 Sobic008G147700 Sobic008G144401--Sobic008G147700 Sobic010G130200 Sobic010G130200 Sobic008G144401--Sobic010G130200 Sobic010G188400 Sobic010G188400 Sobic008G144401--Sobic010G188400 Sobic003G241000 Sobic003G241000 Sobic008G144401--Sobic003G241000 Sobic002G258100--Sobic002G175500 Sobic002G258100--Sobic008G107500 Sobic010G144400 Sobic010G144400 Sobic002G258100--Sobic010G144400 Sobic001G010400 Sobic001G010400 Sobic002G258100--Sobic001G010400 Sobic001G023200 Sobic001G023200 Sobic002G258100--Sobic001G023200 Sobic001G253600 Sobic001G253600 Sobic002G258100--Sobic001G253600 Sobic001G056700 Sobic001G056700 Sobic002G258100--Sobic001G056700 Sobic004G172700 Sobic004G172700 Sobic002G258100--Sobic004G172700 Sobic001G393800 Sobic001G393800 Sobic002G258100--Sobic001G393800 Sobic008G107500--Sobic002G258100 Sobic008G107500--Sobic001G393800 Sobic005G150800 Sobic005G150800 Sobic008G107500--Sobic005G150800 Sobic002G180600 Sobic002G180600 Sobic008G107500--Sobic002G180600 Sobic008G107500--Sobic001G010400 Sobic003G295400 Sobic003G295400 Sobic008G107500--Sobic003G295400 Sobic004G203100 Sobic004G203100 Sobic008G107500--Sobic004G203100 Sobic008G107500--Sobic002G175500 Sobic009G003900 Sobic009G003900 Sobic008G107500--Sobic009G003900 Sobic003G354400--Sobic003G061800 Sobic003G354400--Sobic003G329400 Sobic009G057300 Sobic009G057300 Sobic003G354400--Sobic009G057300 Sobic003G354400--Sobic010G130200 Sobic003G354400--Sobic008G144401 Sobic001G120300 Sobic001G120300 Sobic003G354400--Sobic001G120300 Sobic001G111150 Sobic001G111150 Sobic003G354400--Sobic001G111150 Sobic003G354400--Sobic008G147700 Sobic009G126900 Sobic009G126900 Sobic003G354400--Sobic009G126900 Sobic010G274500--Sobic010G188400 Sobic002G376300 Sobic002G376300 Sobic010G274500--Sobic002G376300 Sobic010G274500--Sobic009G177400 Sobic008G156300 Sobic008G156300 Sobic010G274500--Sobic008G156300 Sobic002G392700 Sobic002G392700 Sobic010G274500--Sobic002G392700 Sobic005G229166 Sobic005G229166 Sobic010G274500--Sobic005G229166 Sobic010G274500--Sobic001G120300 Sobic002G189400 Sobic002G189400 Sobic010G274500--Sobic002G189400 Sobic003G145900 Sobic003G145900 Sobic010G274500--Sobic003G145900 Sobic002G175500--Sobic002G258100 Sobic002G175500--Sobic001G393800 Sobic002G175500--Sobic008G107500 Sobic002G175500--Sobic001G023200 Sobic002G175500--Sobic009G177400 Sobic006G157700 Sobic006G157700 Sobic002G175500--Sobic006G157700 Sobic002G175500--Sobic001G010400 Sobic002G175500--Sobic001G253600 Sobic003G009100 Sobic003G009100 Sobic002G175500--Sobic003G009100 Sobic004G163300--Sobic002G114800 Sobic004G163300--Sobic009G177400 Sobic004G354400 Sobic004G354400 Sobic004G163300--Sobic004G354400 Sobic001G201500 Sobic001G201500 Sobic004G163300--Sobic001G201500 Sobic010G242900 Sobic010G242900 Sobic004G163300--Sobic010G242900 Sobic003G313400 Sobic003G313400 Sobic004G163300--Sobic003G313400 Sobic009G229300 Sobic009G229300 Sobic004G163300--Sobic009G229300 Sobic004G163300--Sobic002G306700 Sobic004G163300--Sobic001G049200 Sobic002G242500 Sobic002G242500 Sobic007G098400--Sobic002G242500 Sobic005G211400 Sobic005G211400 Sobic007G098400--Sobic005G211400 Sobic009G241700 Sobic009G241700 Sobic007G098400--Sobic009G241700 Sobic007G098400--Sobic001G010400 Sobic007G098400--Sobic001G049200 Sobic001G380400 Sobic001G380400 Sobic007G098400--Sobic001G380400 Sobic001G090000 Sobic001G090000 Sobic007G098400--Sobic001G090000 Sobic003G273700 Sobic003G273700 Sobic007G098400--Sobic003G273700 Sobic002G294200 Sobic002G294200 Sobic007G098400--Sobic002G294200
Octagon: transcription factors


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