Gene annotation
Transcriptome id Sobic.008G144401.1
Synonym -
Functional annotation -
UniProt A0A1Z5R6P7
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF153
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT1G66540 : Cytochrome P450 superfamily protein
RAP-DB (Rice) LOC_Os12g39300.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a004393 , Zm00025a004397
Brachypodium -
Barley HORVU5Hr1G018780.1 , HORVU5Hr1G018780.3 , HORVU5Hr1G018780.2 , HORVU5Hr1G018790.2 , HORVU5Hr1G018790.3 , HORVU5Hr1G018790.1
Wheat TraesCS5D02G084400 , TraesCS5B02G077900 , TraesCS5A02G071800 , TraesCS6B02G149300 , TraesCS5D02G084300 , TraesCS6A02G120900 , TraesCS6A02G121000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
2 Sobic.009G177400 leucine-rich repeat family protein, putative, expressed -
3 Sobic.003G329400 dihydropyrimidinase, putative, expressed K01464: DPYS, dht, dihydropyrimidinase
4 Sobic.003G061800 glutaryl-CoA dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
5 Sobic.003G005800 salt stress root protein RS1, putative, expressed -
6 Sobic.008G147700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein K14169: CTU2, cytoplasmic tRNA 2-thiolation protein 2
7 Sobic.010G130200 BPI/LBP family protein At3g20270 precursor, putative, expressed K05399: lipopolysaccharide-binding protein
8 Sobic.010G188400 copine-1, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
9 Sobic.003G241000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CTP synthase, putative, expressed K01937: pyrG, CTP synthase
10 Sobic.001G120300 phytanoyl-CoA dioxygenase, putative, expressed K00477: phytanoyl-CoA hydroxylase
11 Sobic.001G132000 fumarylacetoacetase, putative, expressed K01557: acylpyruvate hydrolase
12 Sobic.002G188500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
13 Sobic.009G126900 mitochondrial carrier protein, putative, expressed -
14 Sobic.003G317400 Diacylglycerol kinase DGK (Os)(PubMedID : 27208977)@diacylglycerol kinase, putative, expressed K04718: sphingosine kinase
15 Sobic.009G057300 acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
16 Sobic.006G127100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@malate synthase, glyoxysomal, putative, expressed K01638: aceB, malate synthase
17 Sobic.006G157700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glycosyl hydrolase family 3 protein, putative, expressed -
18 Sobic.006G138400 regulatory subunit, putative, expressed -
19 Sobic.004G345800 Peroxisomal 3-ketoacyl-CoA thiolase 3 PKT3 (At)(PubMedID : 27208977)@3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed K07513: acetyl-CoA acyltransferase 1
20 Sobic.009G167700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase


Gene co-expression network
sample Sobic008G144401 Sobic008G144401 Sobic003G354400 Sobic003G354400 Sobic008G144401--Sobic003G354400 Sobic009G177400 Sobic009G177400 Sobic008G144401--Sobic009G177400 Sobic003G329400 Sobic003G329400 Sobic008G144401--Sobic003G329400 Sobic003G061800 Sobic003G061800 Sobic008G144401--Sobic003G061800 Sobic003G005800 Sobic003G005800 Sobic008G144401--Sobic003G005800 Sobic008G147700 Sobic008G147700 Sobic008G144401--Sobic008G147700 Sobic010G130200 Sobic010G130200 Sobic008G144401--Sobic010G130200 Sobic010G188400 Sobic010G188400 Sobic008G144401--Sobic010G188400 Sobic003G241000 Sobic003G241000 Sobic008G144401--Sobic003G241000 Sobic003G354400--Sobic003G061800 Sobic003G354400--Sobic003G329400 Sobic009G057300 Sobic009G057300 Sobic003G354400--Sobic009G057300 Sobic003G354400--Sobic010G130200 Sobic003G354400--Sobic008G144401 Sobic001G120300 Sobic001G120300 Sobic003G354400--Sobic001G120300 Sobic001G111150 Sobic001G111150 Sobic003G354400--Sobic001G111150 Sobic003G354400--Sobic008G147700 Sobic009G126900 Sobic009G126900 Sobic003G354400--Sobic009G126900 Sobic002G114800 Sobic002G114800 Sobic009G177400--Sobic002G114800 Sobic009G177400--Sobic008G144401 Sobic002G258100 Sobic002G258100 Sobic009G177400--Sobic002G258100 Sobic008G107500 Sobic008G107500 Sobic009G177400--Sobic008G107500 Sobic009G177400--Sobic003G354400 Sobic010G274500 Sobic010G274500 Sobic009G177400--Sobic010G274500 Sobic002G175500 Sobic002G175500 Sobic009G177400--Sobic002G175500 Sobic004G163300 Sobic004G163300 Sobic009G177400--Sobic004G163300 Sobic007G098400 Sobic007G098400 Sobic009G177400--Sobic007G098400 Sobic001G322700 Sobic001G322700 Sobic003G329400--Sobic001G322700 Sobic008G062200 Sobic008G062200 Sobic003G329400--Sobic008G062200 Sobic001G325200 Sobic001G325200 Sobic003G329400--Sobic001G325200 Sobic010G107000 Sobic010G107000 Sobic003G329400--Sobic010G107000 Sobic002G304000 Sobic002G304000 Sobic003G329400--Sobic002G304000 Sobic007G068100 Sobic007G068100 Sobic003G329400--Sobic007G068100 Sobic009G226300 Sobic009G226300 Sobic003G329400--Sobic009G226300 Sobic003G148800 Sobic003G148800 Sobic003G329400--Sobic003G148800 Sobic003G329400--Sobic003G354400 Sobic003G061800--Sobic009G057300 Sobic004G345800 Sobic004G345800 Sobic003G061800--Sobic004G345800 Sobic003G061800--Sobic003G354400 Sobic001G474500 Sobic001G474500 Sobic003G061800--Sobic001G474500 Sobic003G061800--Sobic009G126900 Sobic003G388251 Sobic003G388251 Sobic003G061800--Sobic003G388251 Sobic003G061800--Sobic007G068100 Sobic003G061800--Sobic003G329400 Sobic004G101900 Sobic004G101900 Sobic003G061800--Sobic004G101900 Sobic002G188500 Sobic002G188500 Sobic003G005800--Sobic002G188500 Sobic001G443900 Sobic001G443900 Sobic003G005800--Sobic001G443900 Sobic009G235900 Sobic009G235900 Sobic003G005800--Sobic009G235900 Sobic008G160700 Sobic008G160700 Sobic003G005800--Sobic008G160700 Sobic004G037900 Sobic004G037900 Sobic003G005800--Sobic004G037900 Sobic006G138400 Sobic006G138400 Sobic003G005800--Sobic006G138400 Sobic001G194900 Sobic001G194900 Sobic003G005800--Sobic001G194900 Sobic009G121100 Sobic009G121100 Sobic003G005800--Sobic009G121100 Sobic006G214500 Sobic006G214500 Sobic003G005800--Sobic006G214500 Sobic008G147700--Sobic003G354400 Sobic003G436300 Sobic003G436300 Sobic008G147700--Sobic003G436300 Sobic008G147700--Sobic010G188400 Sobic008G147700--Sobic001G120300 Sobic005G203800 Sobic005G203800 Sobic008G147700--Sobic005G203800 Sobic006G083600 Sobic006G083600 Sobic008G147700--Sobic006G083600 Sobic005G091600 Sobic005G091600 Sobic008G147700--Sobic005G091600 Sobic008G147700--Sobic010G130200 Sobic006G176600 Sobic006G176600 Sobic008G147700--Sobic006G176600 Sobic010G130200--Sobic006G083600 Sobic010G130200--Sobic001G111150 Sobic003G305200 Sobic003G305200 Sobic010G130200--Sobic003G305200 Sobic006G271200 Sobic006G271200 Sobic010G130200--Sobic006G271200 Sobic002G270500 Sobic002G270500 Sobic010G130200--Sobic002G270500 Sobic010G264200 Sobic010G264200 Sobic010G130200--Sobic010G264200 Sobic010G130200--Sobic003G354400 Sobic007G024700 Sobic007G024700 Sobic010G130200--Sobic007G024700 Sobic010G130200--Sobic005G203800 Sobic010G188400--Sobic010G274500 Sobic007G202600 Sobic007G202600 Sobic010G188400--Sobic007G202600 Sobic010G188400--Sobic008G147700 Sobic010G188400--Sobic001G120300 Sobic001G427100 Sobic001G427100 Sobic010G188400--Sobic001G427100 Sobic003G145900 Sobic003G145900 Sobic010G188400--Sobic003G145900 Sobic010G188400--Sobic003G305200 Sobic009G148300 Sobic009G148300 Sobic010G188400--Sobic009G148300 Sobic002G303000 Sobic002G303000 Sobic010G188400--Sobic002G303000 Sobic008G021800 Sobic008G021800 Sobic003G241000--Sobic008G021800 Sobic002G113300 Sobic002G113300 Sobic003G241000--Sobic002G113300 Sobic001G447500 Sobic001G447500 Sobic003G241000--Sobic001G447500 Sobic006G127100 Sobic006G127100 Sobic003G241000--Sobic006G127100 Sobic004G297400 Sobic004G297400 Sobic003G241000--Sobic004G297400 Sobic001G156100 Sobic001G156100 Sobic003G241000--Sobic001G156100 Sobic003G061400 Sobic003G061400 Sobic003G241000--Sobic003G061400 Sobic001G408200 Sobic001G408200 Sobic003G241000--Sobic001G408200 Sobic003G241000--Sobic003G061800
Octagon: transcription factors


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