Gene annotation
Transcriptome id Sobic.009G126900.1
Synonym PNC1, Sb09g019430
Functional annotation mitochondrial carrier protein, putative, expressed
UniProt C5YXJ7
Pfam PF00153
Panther DB PTHR24089 PTHR24089:SF282
NCBI CDD KOG0769; Predicted mitochondrial carrier protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G05290 : peroxisomal adenine nucleotide carrier 1
RAP-DB (Rice) LOC_Os05g32630.1 : mitochondrial carrier protein, putative, expressed
MaizeGDB (Corn) Zm00025a043590 , Zm00025a037635 , Zm00025a049968
Brachypodium KQK06462
Barley HORVU1Hr1G062940.2 , HORVU1Hr1G062940.3 , HORVU1Hr1G062940.1 , HORVU1Hr1G062940.6 , HORVU1Hr1G062940.7 , HORVU1Hr1G062940.4 , HORVU1Hr1G062940.5
Wheat TraesCS1D02G245700 , TraesCS1A02G246400 , TraesCS1B02G257100
Populus -


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cDNA sequences
Sobic.009G126900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G043400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.002G270500 UBX domain-containing protein, putative, expressed -
3 Sobic.002G009700 AMP-binding domain containing protein, expressed -
4 Sobic.006G271200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease ATG4, putative, expressed K08342: cysteine protease ATG4
5 Sobic.001G003000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
6 Sobic.004G124200 3-hydroxyacyl-CoA dehydrogenase, putative, expressed K10527: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
7 Sobic.003G005600 ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
8 Sobic.003G329400 dihydropyrimidinase, putative, expressed K01464: DPYS, dht, dihydropyrimidinase
9 Sobic.004G101900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@citrate synthase, putative, expressed K01647: CS, citrate synthase
10 Sobic.008G062200 dehydrogenase E1 component domain containing protein, expressed K00166: BCKDHA, 2-oxoisovalerate dehydrogenase E1 component alpha subunit
11 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
12 Sobic.003G388251 - K01166: ribonuclease T2
13 Sobic.003G061800 glutaryl-CoA dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
14 Sobic.003G355600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
15 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
16 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
17 Sobic.001G474700 expressed protein -
18 Sobic.004G162400 ERD1 protein, chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
19 Sobic.002G304000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nitrilase, putative, expressed K01431: UPB1, beta-ureidopropionase
20 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase


Gene co-expression network
sample Sobic009G126900 Sobic009G126900 Sobic010G043400 Sobic010G043400 Sobic009G126900--Sobic010G043400 Sobic002G270500 Sobic002G270500 Sobic009G126900--Sobic002G270500 Sobic002G009700 Sobic002G009700 Sobic009G126900--Sobic002G009700 Sobic006G271200 Sobic006G271200 Sobic009G126900--Sobic006G271200 Sobic001G003000 Sobic001G003000 Sobic009G126900--Sobic001G003000 Sobic004G124200 Sobic004G124200 Sobic009G126900--Sobic004G124200 Sobic003G005600 Sobic003G005600 Sobic009G126900--Sobic003G005600 Sobic003G329400 Sobic003G329400 Sobic009G126900--Sobic003G329400 Sobic004G101900 Sobic004G101900 Sobic009G126900--Sobic004G101900 Sobic010G043400--Sobic009G126900 Sobic010G043400--Sobic004G124200 Sobic010G043400--Sobic002G009700 Sobic010G018100 Sobic010G018100 Sobic010G043400--Sobic010G018100 Sobic003G355600 Sobic003G355600 Sobic010G043400--Sobic003G355600 Sobic010G043400--Sobic006G271200 Sobic010G107000 Sobic010G107000 Sobic010G043400--Sobic010G107000 Sobic006G204900 Sobic006G204900 Sobic010G043400--Sobic006G204900 Sobic006G125400 Sobic006G125400 Sobic010G043400--Sobic006G125400 Sobic007G024700 Sobic007G024700 Sobic002G270500--Sobic007G024700 Sobic001G207400 Sobic001G207400 Sobic002G270500--Sobic001G207400 Sobic004G355000 Sobic004G355000 Sobic002G270500--Sobic004G355000 Sobic005G157000 Sobic005G157000 Sobic002G270500--Sobic005G157000 Sobic002G430000 Sobic002G430000 Sobic002G270500--Sobic002G430000 Sobic002G270500--Sobic009G126900 Sobic009G094300 Sobic009G094300 Sobic002G270500--Sobic009G094300 Sobic004G113400 Sobic004G113400 Sobic002G270500--Sobic004G113400 Sobic004G269200 Sobic004G269200 Sobic002G270500--Sobic004G269200 Sobic002G009700--Sobic003G355600 Sobic002G009700--Sobic009G126900 Sobic002G009700--Sobic010G043400 Sobic008G062200 Sobic008G062200 Sobic002G009700--Sobic008G062200 Sobic003G322700 Sobic003G322700 Sobic002G009700--Sobic003G322700 Sobic002G009700--Sobic003G329400 Sobic002G009700--Sobic006G204900 Sobic009G193700 Sobic009G193700 Sobic002G009700--Sobic009G193700 Sobic002G009700--Sobic007G024700 Sobic006G271200--Sobic001G003000 Sobic006G237900 Sobic006G237900 Sobic006G271200--Sobic006G237900 Sobic006G271200--Sobic009G126900 Sobic010G130200 Sobic010G130200 Sobic006G271200--Sobic010G130200 Sobic001G089800 Sobic001G089800 Sobic006G271200--Sobic001G089800 Sobic006G271200--Sobic010G043400 Sobic004G351300 Sobic004G351300 Sobic006G271200--Sobic004G351300 Sobic001G436900 Sobic001G436900 Sobic006G271200--Sobic001G436900 Sobic010G072800 Sobic010G072800 Sobic006G271200--Sobic010G072800 Sobic001G003000--Sobic006G271200 Sobic001G003000--Sobic001G089800 Sobic001G003000--Sobic009G126900 Sobic004G102400 Sobic004G102400 Sobic001G003000--Sobic004G102400 Sobic001G003000--Sobic006G237900 Sobic001G003000--Sobic003G005600 Sobic001G003000--Sobic010G043400 Sobic001G003000--Sobic009G193700 Sobic001G350700 Sobic001G350700 Sobic001G003000--Sobic001G350700 Sobic003G388251 Sobic003G388251 Sobic004G124200--Sobic003G388251 Sobic004G124200--Sobic004G101900 Sobic001G325200 Sobic001G325200 Sobic004G124200--Sobic001G325200 Sobic001G015500 Sobic001G015500 Sobic004G124200--Sobic001G015500 Sobic009G161000 Sobic009G161000 Sobic004G124200--Sobic009G161000 Sobic004G124200--Sobic010G043400 Sobic006G199000 Sobic006G199000 Sobic004G124200--Sobic006G199000 Sobic007G068100 Sobic007G068100 Sobic004G124200--Sobic007G068100 Sobic005G178100 Sobic005G178100 Sobic004G124200--Sobic005G178100 Sobic003G005600--Sobic009G126900 Sobic002G304000 Sobic002G304000 Sobic003G005600--Sobic002G304000 Sobic003G005600--Sobic001G003000 Sobic003G005600--Sobic003G329400 Sobic003G005600--Sobic006G271200 Sobic003G005600--Sobic004G101900 Sobic003G005600--Sobic008G062200 Sobic003G005600--Sobic010G043400 Sobic010G064700 Sobic010G064700 Sobic003G005600--Sobic010G064700 Sobic001G322700 Sobic001G322700 Sobic003G329400--Sobic001G322700 Sobic003G329400--Sobic008G062200 Sobic003G329400--Sobic001G325200 Sobic003G329400--Sobic010G107000 Sobic003G329400--Sobic002G304000 Sobic003G329400--Sobic007G068100 Sobic009G226300 Sobic009G226300 Sobic003G329400--Sobic009G226300 Sobic003G148800 Sobic003G148800 Sobic003G329400--Sobic003G148800 Sobic003G354400 Sobic003G354400 Sobic003G329400--Sobic003G354400 Sobic004G101900--Sobic002G304000 Sobic002G215700 Sobic002G215700 Sobic004G101900--Sobic002G215700 Sobic004G101900--Sobic001G325200 Sobic004G101900--Sobic009G226300 Sobic009G054500 Sobic009G054500 Sobic004G101900--Sobic009G054500 Sobic004G101900--Sobic008G062200 Sobic004G101900--Sobic003G148800 Sobic004G101900--Sobic004G124200 Sobic004G101900--Sobic001G015500
Octagon: transcription factors


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