Gene annotation
Transcriptome id Sobic.002G258100.1
Synonym Sb02g029320
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
expressed protein
UniProt C5X585
Pfam -
Panther DB PTHR34781 PTHR34781:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G27290 : -
RAP-DB (Rice) LOC_Os09g32960.1 : expressed protein
MaizeGDB (Corn) Zm00025a014308
Brachypodium PNT64895 , PNT64896 , KQJ90933 , KQJ90935 , KQJ90934
Barley HORVU5Hr1G076550.1 , HORVU5Hr1G076550.2
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G175500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
2 Sobic.008G107500 WRKY96, expressed -
3 Sobic.010G144400 glycosyltransferase, putative, expressed -
4 Sobic.001G010400 snRK1-interacting protein 1, putative, expressed -
5 Sobic.001G023200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@electron transfer flavoprotein subunit alpha, mitochondrial precursor, putative, expressed K03522: fixB, electron transfer flavoprotein alpha subunit
6 Sobic.001G253600 expressed protein -
7 Sobic.001G056700 "O2(rtholog in meize:Hartings et al., 1989)"(PubMedID : 31659831)@bZIP transcription factor domain containing protein, expressed -
8 Sobic.004G172700 plant neutral invertase domain containing protein, expressed -
9 Sobic.001G393800 enoyl-CoA hydratase/isomerase family protein, putative, expressed -
10 Sobic.008G106900 cornichon protein, putative, expressed -
11 Sobic.002G180600 expressed protein K17968: TRIAP1, TRIAP1/MDM35 family protein
12 Sobic.004G203100 SNF7 domain containing protein, putative, expressed K12195: CHMP6, charged multivesicular body protein 6
13 Sobic.002G261800 snRK1-interacting protein 1, putative, expressed -
14 Sobic.001G439700 actin-depolymerizing factor, putative, expressed K05765: cofilin
15 Sobic.002G068300 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
16 Sobic.009G177400 leucine-rich repeat family protein, putative, expressed -
17 Sobic.001G148300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
18 Sobic.007G002200 glycine-rich RNA-binding protein 7, putative, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
19 Sobic.007G098400 tyrosine protein kinase domain containing protein, putative, expressed -
20 Sobic.006G240800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@myosin-Ie, putative, expressed -


Gene co-expression network
sample Sobic002G258100 Sobic002G258100 Sobic002G175500 Sobic002G175500 Sobic002G258100--Sobic002G175500 Sobic008G107500 Sobic008G107500 Sobic002G258100--Sobic008G107500 Sobic010G144400 Sobic010G144400 Sobic002G258100--Sobic010G144400 Sobic001G010400 Sobic001G010400 Sobic002G258100--Sobic001G010400 Sobic001G023200 Sobic001G023200 Sobic002G258100--Sobic001G023200 Sobic001G253600 Sobic001G253600 Sobic002G258100--Sobic001G253600 Sobic001G056700 Sobic001G056700 Sobic002G258100--Sobic001G056700 Sobic004G172700 Sobic004G172700 Sobic002G258100--Sobic004G172700 Sobic001G393800 Sobic001G393800 Sobic002G258100--Sobic001G393800 Sobic002G175500--Sobic002G258100 Sobic002G175500--Sobic001G393800 Sobic002G175500--Sobic008G107500 Sobic002G175500--Sobic001G023200 Sobic009G177400 Sobic009G177400 Sobic002G175500--Sobic009G177400 Sobic006G157700 Sobic006G157700 Sobic002G175500--Sobic006G157700 Sobic002G175500--Sobic001G010400 Sobic002G175500--Sobic001G253600 Sobic003G009100 Sobic003G009100 Sobic002G175500--Sobic003G009100 Sobic008G107500--Sobic002G258100 Sobic008G107500--Sobic001G393800 Sobic005G150800 Sobic005G150800 Sobic008G107500--Sobic005G150800 Sobic002G180600 Sobic002G180600 Sobic008G107500--Sobic002G180600 Sobic008G107500--Sobic001G010400 Sobic003G295400 Sobic003G295400 Sobic008G107500--Sobic003G295400 Sobic004G203100 Sobic004G203100 Sobic008G107500--Sobic004G203100 Sobic008G107500--Sobic002G175500 Sobic009G003900 Sobic009G003900 Sobic008G107500--Sobic009G003900 Sobic002G068300 Sobic002G068300 Sobic010G144400--Sobic002G068300 Sobic010G144400--Sobic001G056700 Sobic010G228600 Sobic010G228600 Sobic010G144400--Sobic010G228600 Sobic010G144400--Sobic004G172700 Sobic001G090000 Sobic001G090000 Sobic010G144400--Sobic001G090000 Sobic009G016201 Sobic009G016201 Sobic010G144400--Sobic009G016201 Sobic010G144400--Sobic002G258100 Sobic001G471900 Sobic001G471900 Sobic010G144400--Sobic001G471900 Sobic010G144400--Sobic001G253600 Sobic002G249000 Sobic002G249000 Sobic001G010400--Sobic002G249000 Sobic007G148800 Sobic007G148800 Sobic001G010400--Sobic007G148800 Sobic004G185900 Sobic004G185900 Sobic001G010400--Sobic004G185900 Sobic002G113800 Sobic002G113800 Sobic001G010400--Sobic002G113800 Sobic001G010400--Sobic001G393800 Sobic001G010400--Sobic002G258100 Sobic001G010400--Sobic002G180600 Sobic001G010400--Sobic008G107500 Sobic010G016400 Sobic010G016400 Sobic001G010400--Sobic010G016400 Sobic001G023200--Sobic003G009100 Sobic001G023200--Sobic002G258100 Sobic001G023200--Sobic001G010400 Sobic004G347300 Sobic004G347300 Sobic001G023200--Sobic004G347300 Sobic001G023200--Sobic001G393800 Sobic001G023200--Sobic004G203100 Sobic001G023200--Sobic010G016400 Sobic002G113300 Sobic002G113300 Sobic001G023200--Sobic002G113300 Sobic007G106900 Sobic007G106900 Sobic001G023200--Sobic007G106900 Sobic001G253600--Sobic010G228600 Sobic001G253600--Sobic010G144400 Sobic001G253600--Sobic001G056700 Sobic001G253600--Sobic002G258100 Sobic001G253600--Sobic001G471900 Sobic001G149700 Sobic001G149700 Sobic001G253600--Sobic001G149700 Sobic008G106800 Sobic008G106800 Sobic001G253600--Sobic008G106800 Sobic007G126200 Sobic007G126200 Sobic001G253600--Sobic007G126200 Sobic003G116700 Sobic003G116700 Sobic001G253600--Sobic003G116700 Sobic001G056700--Sobic001G471900 Sobic002G291300 Sobic002G291300 Sobic001G056700--Sobic002G291300 Sobic001G056700--Sobic010G228600 Sobic001G056700--Sobic010G144400 Sobic004G164500 Sobic004G164500 Sobic001G056700--Sobic004G164500 Sobic001G082400 Sobic001G082400 Sobic001G056700--Sobic001G082400 Sobic001G371300 Sobic001G371300 Sobic001G056700--Sobic001G371300 Sobic003G273100 Sobic003G273100 Sobic001G056700--Sobic003G273100 Sobic002G278300 Sobic002G278300 Sobic001G056700--Sobic002G278300 Sobic004G172700--Sobic009G016201 Sobic004G172700--Sobic010G144400 Sobic002G282400 Sobic002G282400 Sobic004G172700--Sobic002G282400 Sobic002G261800 Sobic002G261800 Sobic004G172700--Sobic002G261800 Sobic003G249800 Sobic003G249800 Sobic004G172700--Sobic003G249800 Sobic007G126100 Sobic007G126100 Sobic004G172700--Sobic007G126100 Sobic007G095400 Sobic007G095400 Sobic004G172700--Sobic007G095400 Sobic002G328300 Sobic002G328300 Sobic004G172700--Sobic002G328300 Sobic001G064800 Sobic001G064800 Sobic004G172700--Sobic001G064800 Sobic001G393800--Sobic008G107500 Sobic001G393800--Sobic005G150800 Sobic001G393800--Sobic001G010400 Sobic003G333400 Sobic003G333400 Sobic001G393800--Sobic003G333400 Sobic004G167400 Sobic004G167400 Sobic001G393800--Sobic004G167400 Sobic001G057800 Sobic001G057800 Sobic001G393800--Sobic001G057800 Sobic001G393800--Sobic002G175500 Sobic009G099500 Sobic009G099500 Sobic001G393800--Sobic009G099500 Sobic001G393800--Sobic001G023200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.