Gene annotation
Transcriptome id Sobic.001G148300.3,Sobic.001G148300.2,Sobic.001G148300.1
Synonym Sb01g012900
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
glucan endo-1,3-beta-glucosidase precursor, putative, expressed
UniProt Q8W0R0
Pfam PF07983 PF00332
Panther DB PTHR32227 PTHR32227:SF77
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT1G64760 : O-Glycosyl hydrolases family 17 protein
RAP-DB (Rice) LOC_Os03g45390.1 : glucan endo-1,3-beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a015793 , Zm00025a016105 , Zm00025a017203 , Zm00025a029899 , Zm00025a016604
Brachypodium KQK12799 , KQK20720 , KQK13900 , KQJ88117 , KQK21370
Barley HORVU5Hr1G069050.9 , HORVU5Hr1G069050.8 , HORVU5Hr1G069050.3 , HORVU5Hr1G069050.2 , HORVU5Hr1G069050.5 , HORVU5Hr1G069050.4 , HORVU5Hr1G069050.7 , HORVU0Hr1G010040.10 , HORVU0Hr1G010040.9 , HORVU0Hr1G010040.8 , HORVU0Hr1G010040.7 , HORVU0Hr1G010040.6 , HORVU0Hr1G010040.5 , HORVU0Hr1G010040.4 , HORVU0Hr1G010040.2 , HORVU0Hr1G010040.1 , HORVU5Hr1G069050.25 , HORVU5Hr1G069050.26 , HORVU5Hr1G069050.27 , HORVU4Hr1G002360.5 , HORVU4Hr1G002360.4 , HORVU4Hr1G002360.1 , HORVU4Hr1G002360.2 , HORVU5Hr1G069050.20 , HORVU3Hr1G110450.1 , HORVU3Hr1G110450.2 , HORVU5Hr1G069050.19 , HORVU5Hr1G069050.18 , HORVU5Hr1G069050.15 , HORVU5Hr1G069050.14 , HORVU5Hr1G069050.17 , HORVU5Hr1G069050.16 , HORVU5Hr1G069050.11 , HORVU5Hr1G069050.10 , HORVU5Hr1G069050.12 , HORVU5Hr1G104230.3 , HORVU5Hr1G104230.2 , HORVU5Hr1G104230.1 , HORVU5Hr1G104230.5 , HORVU5Hr1G104230.4
Wheat TraesCS3D02G506300 , TraesCS5D02G249200 , TraesCS1A02G356800 , TraesCS5A02G242700 , TraesCS5A02G429600 , TraesCS4B02G015500 , TraesCS1B02G373000 , TraesCS4A02G298200 , TraesCS5D02G437700 , TraesCS3A02G499400 , TraesCS3B02G562700 , TraesCS1D02G360900 , TraesCS4D02G013600 , TraesCS5B02G431600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G258100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.001G023200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@electron transfer flavoprotein subunit alpha, mitochondrial precursor, putative, expressed K03522: fixB, electron transfer flavoprotein alpha subunit
3 Sobic.008G107500 WRKY96, expressed -
4 Sobic.003G182800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
5 Sobic.003G379700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Increased expression in phyB-1 mutant(PubMedID : 26893475)@No apical meristem protein, putative, expressed -
6 Sobic.009G177400 leucine-rich repeat family protein, putative, expressed -
7 Sobic.004G203100 SNF7 domain containing protein, putative, expressed K12195: CHMP6, charged multivesicular body protein 6
8 Sobic.008G097401 - -
9 Sobic.001G330700 NAD dependent epimerase/dehydratase family protein, putative, expressed -
10 Sobic.004G301400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein K08331: autophagy-related protein 13
11 Sobic.003G348400 ankyrin repeat-containing protein, putative, expressed -
12 Sobic.001G393800 enoyl-CoA hydratase/isomerase family protein, putative, expressed -
13 Sobic.006G140000 receptor-like protein kinase precursor, putative, expressed -
14 Sobic.009G157900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
15 Sobic.008G147700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein K14169: CTU2, cytoplasmic tRNA 2-thiolation protein 2
16 Sobic.007G154701 - -
17 Sobic.001G078500 expressed protein -
18 Sobic.009G237600 transcription factor, putative, expressed K09060: plant G-box-binding factor
19 Sobic.006G114800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ras-related protein, putative, expressed K07877: Ras-related protein Rab-2A
20 Sobic.001G125000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@phosphatase, putative, expressed K07025: putative hydrolase of the HAD superfamily


Gene co-expression network
sample Sobic001G148300 Sobic001G148300 Sobic002G258100 Sobic002G258100 Sobic001G148300--Sobic002G258100 Sobic001G023200 Sobic001G023200 Sobic001G148300--Sobic001G023200 Sobic008G107500 Sobic008G107500 Sobic001G148300--Sobic008G107500 Sobic003G182800 Sobic003G182800 Sobic001G148300--Sobic003G182800 Sobic003G379700 Sobic003G379700 Sobic001G148300--Sobic003G379700 Sobic009G177400 Sobic009G177400 Sobic001G148300--Sobic009G177400 Sobic004G203100 Sobic004G203100 Sobic001G148300--Sobic004G203100 Sobic008G097401 Sobic008G097401 Sobic001G148300--Sobic008G097401 Sobic001G330700 Sobic001G330700 Sobic001G148300--Sobic001G330700 Sobic002G175500 Sobic002G175500 Sobic002G258100--Sobic002G175500 Sobic002G258100--Sobic008G107500 Sobic010G144400 Sobic010G144400 Sobic002G258100--Sobic010G144400 Sobic001G010400 Sobic001G010400 Sobic002G258100--Sobic001G010400 Sobic002G258100--Sobic001G023200 Sobic001G253600 Sobic001G253600 Sobic002G258100--Sobic001G253600 Sobic001G056700 Sobic001G056700 Sobic002G258100--Sobic001G056700 Sobic004G172700 Sobic004G172700 Sobic002G258100--Sobic004G172700 Sobic001G393800 Sobic001G393800 Sobic002G258100--Sobic001G393800 Sobic003G009100 Sobic003G009100 Sobic001G023200--Sobic003G009100 Sobic001G023200--Sobic002G258100 Sobic001G023200--Sobic001G010400 Sobic004G347300 Sobic004G347300 Sobic001G023200--Sobic004G347300 Sobic001G023200--Sobic001G393800 Sobic001G023200--Sobic004G203100 Sobic010G016400 Sobic010G016400 Sobic001G023200--Sobic010G016400 Sobic002G113300 Sobic002G113300 Sobic001G023200--Sobic002G113300 Sobic007G106900 Sobic007G106900 Sobic001G023200--Sobic007G106900 Sobic008G107500--Sobic002G258100 Sobic008G107500--Sobic001G393800 Sobic005G150800 Sobic005G150800 Sobic008G107500--Sobic005G150800 Sobic002G180600 Sobic002G180600 Sobic008G107500--Sobic002G180600 Sobic008G107500--Sobic001G010400 Sobic003G295400 Sobic003G295400 Sobic008G107500--Sobic003G295400 Sobic008G107500--Sobic004G203100 Sobic008G107500--Sobic002G175500 Sobic009G003900 Sobic009G003900 Sobic008G107500--Sobic009G003900 Sobic008G175900 Sobic008G175900 Sobic003G182800--Sobic008G175900 Sobic003G182800--Sobic001G148300 Sobic003G182800--Sobic009G177400 Sobic010G188400 Sobic010G188400 Sobic003G182800--Sobic010G188400 Sobic010G145900 Sobic010G145900 Sobic003G182800--Sobic010G145900 Sobic002G313500 Sobic002G313500 Sobic003G182800--Sobic002G313500 Sobic003G305200 Sobic003G305200 Sobic003G182800--Sobic003G305200 Sobic006G232000 Sobic006G232000 Sobic003G182800--Sobic006G232000 Sobic001G489700 Sobic001G489700 Sobic003G182800--Sobic001G489700 Sobic001G076000 Sobic001G076000 Sobic003G379700--Sobic001G076000 Sobic003G396000 Sobic003G396000 Sobic003G379700--Sobic003G396000 Sobic008G094700 Sobic008G094700 Sobic003G379700--Sobic008G094700 Sobic005G105000 Sobic005G105000 Sobic003G379700--Sobic005G105000 Sobic006G218700 Sobic006G218700 Sobic003G379700--Sobic006G218700 Sobic001G478300 Sobic001G478300 Sobic003G379700--Sobic001G478300 Sobic004G320000 Sobic004G320000 Sobic003G379700--Sobic004G320000 Sobic003G044200 Sobic003G044200 Sobic003G379700--Sobic003G044200 Sobic009G011700 Sobic009G011700 Sobic003G379700--Sobic009G011700 Sobic002G114800 Sobic002G114800 Sobic009G177400--Sobic002G114800 Sobic008G144401 Sobic008G144401 Sobic009G177400--Sobic008G144401 Sobic009G177400--Sobic002G258100 Sobic009G177400--Sobic008G107500 Sobic003G354400 Sobic003G354400 Sobic009G177400--Sobic003G354400 Sobic010G274500 Sobic010G274500 Sobic009G177400--Sobic010G274500 Sobic009G177400--Sobic002G175500 Sobic004G163300 Sobic004G163300 Sobic009G177400--Sobic004G163300 Sobic007G098400 Sobic007G098400 Sobic009G177400--Sobic007G098400 Sobic010G168600 Sobic010G168600 Sobic004G203100--Sobic010G168600 Sobic003G007500 Sobic003G007500 Sobic004G203100--Sobic003G007500 Sobic002G352700 Sobic002G352700 Sobic004G203100--Sobic002G352700 Sobic004G203100--Sobic001G478300 Sobic008G180900 Sobic008G180900 Sobic004G203100--Sobic008G180900 Sobic010G238700 Sobic010G238700 Sobic004G203100--Sobic010G238700 Sobic009G054700 Sobic009G054700 Sobic004G203100--Sobic009G054700 Sobic010G083700 Sobic010G083700 Sobic004G203100--Sobic010G083700 Sobic010G058900 Sobic010G058900 Sobic004G203100--Sobic010G058900 Sobic002G296300 Sobic002G296300 Sobic008G097401--Sobic002G296300 Sobic009G198500 Sobic009G198500 Sobic008G097401--Sobic009G198500 Sobic001G078500 Sobic001G078500 Sobic008G097401--Sobic001G078500 Sobic010G121300 Sobic010G121300 Sobic008G097401--Sobic010G121300 Sobic004G339200 Sobic004G339200 Sobic008G097401--Sobic004G339200 Sobic001G403700 Sobic001G403700 Sobic008G097401--Sobic001G403700 Sobic004G300900 Sobic004G300900 Sobic008G097401--Sobic004G300900 Sobic002G078400 Sobic002G078400 Sobic008G097401--Sobic002G078400 Sobic003G124800 Sobic003G124800 Sobic008G097401--Sobic003G124800 Sobic009G152200 Sobic009G152200 Sobic001G330700--Sobic009G152200 Sobic001G147200 Sobic001G147200 Sobic001G330700--Sobic001G147200 Sobic003G019200 Sobic003G019200 Sobic001G330700--Sobic003G019200 Sobic001G399100 Sobic001G399100 Sobic001G330700--Sobic001G399100 Sobic004G058000 Sobic004G058000 Sobic001G330700--Sobic004G058000 Sobic009G111600 Sobic009G111600 Sobic001G330700--Sobic009G111600 Sobic005G117400 Sobic005G117400 Sobic001G330700--Sobic005G117400 Sobic008G161000 Sobic008G161000 Sobic001G330700--Sobic008G161000 Sobic003G061900 Sobic003G061900 Sobic001G330700--Sobic003G061900
Octagon: transcription factors


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