Gene annotation
Transcriptome id Sobic.001G125000.2,Sobic.001G125000.3,Sobic.001G125000.1
Synonym Sb01g010990
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)" (PubMedID : 27586543)
phosphatase, putative, expressed
UniProt A0A1B6QIN7 , A0A1B6QIN4 , A0A1B6QIN5
Pfam PF13419
Panther DB PTHR12725 PTHR12725:SF81
NCBI CDD KOG3109; Haloacid dehalogenase-like hydrolase
KEGG Orthology K07025; putative hydrolase of the HAD superfamily
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G32150 : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
RAP-DB (Rice) LOC_Os03g49440.1 : phosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a007741
Brachypodium KQK13654 , KQK13655
Barley HORVU4Hr1G006100.12 , HORVU4Hr1G006100.17 , HORVU4Hr1G006100.16 , HORVU4Hr1G006100.9
Wheat TraesCS4B02G038800 , TraesCS4D02G035700 , TraesCS4A02G275300 , TraesCS4A02G275300
Populus -


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cDNA sequences
Sobic.001G125000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G172700 plant neutral invertase domain containing protein, expressed -
2 Sobic.002G328300 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
3 Sobic.001G330700 NAD dependent epimerase/dehydratase family protein, putative, expressed -
4 Sobic.002G355100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@STE_PAK_Ste20_Slob_Wnk.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
5 Sobic.003G265200 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
6 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta
7 Sobic.001G304700 proline oxidase, mitochondrial precursor, putative, expressed K00318: PRODH, fadM, proline dehydrogenase
8 Sobic.005G229700 GRAS family transcription factor domain containing protein, expressed -
9 Sobic.001G037000 PHD finger protein, putative, expressed -
10 Sobic.008G161000 protein kinase domain containing protein, expressed -
11 Sobic.001G431500 gibberellin receptor GID1L2, putative, expressed -
12 Sobic.010G168800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@inositol oxygenase, putative, expressed K00469: inositol oxygenase
13 Sobic.009G152200 OsFBT7 - F-box and tubby domain containing protein, expressed -
14 Sobic.002G263800 peptidase, T1 family, putative, expressed K02736: 20S proteasome subunit beta 7
15 Sobic.007G126100 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
16 Sobic.006G180100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
17 Sobic.001G225200 expressed protein -
18 Sobic.004G051700 OTU-like cysteine protease family protein, putative, expressed K13719: OTU1, ubiquitin thioesterase OTU1
19 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
20 Sobic.006G165400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glutamate dehydrogenase protein, putative, expressed K00261: GLUD1_2, glutamate dehydrogenase (NAD(P)+)


Gene co-expression network
sample Sobic001G125000 Sobic001G125000 Sobic004G172700 Sobic004G172700 Sobic001G125000--Sobic004G172700 Sobic002G328300 Sobic002G328300 Sobic001G125000--Sobic002G328300 Sobic001G330700 Sobic001G330700 Sobic001G125000--Sobic001G330700 Sobic002G355100 Sobic002G355100 Sobic001G125000--Sobic002G355100 Sobic003G265200 Sobic003G265200 Sobic001G125000--Sobic003G265200 Sobic009G016201 Sobic009G016201 Sobic001G125000--Sobic009G016201 Sobic001G304700 Sobic001G304700 Sobic001G125000--Sobic001G304700 Sobic005G229700 Sobic005G229700 Sobic001G125000--Sobic005G229700 Sobic001G037000 Sobic001G037000 Sobic001G125000--Sobic001G037000 Sobic004G172700--Sobic009G016201 Sobic010G144400 Sobic010G144400 Sobic004G172700--Sobic010G144400 Sobic002G282400 Sobic002G282400 Sobic004G172700--Sobic002G282400 Sobic002G261800 Sobic002G261800 Sobic004G172700--Sobic002G261800 Sobic003G249800 Sobic003G249800 Sobic004G172700--Sobic003G249800 Sobic007G126100 Sobic007G126100 Sobic004G172700--Sobic007G126100 Sobic007G095400 Sobic007G095400 Sobic004G172700--Sobic007G095400 Sobic004G172700--Sobic002G328300 Sobic001G064800 Sobic001G064800 Sobic004G172700--Sobic001G064800 Sobic003G285500 Sobic003G285500 Sobic002G328300--Sobic003G285500 Sobic009G143400 Sobic009G143400 Sobic002G328300--Sobic009G143400 Sobic002G328300--Sobic003G265200 Sobic006G106800 Sobic006G106800 Sobic002G328300--Sobic006G106800 Sobic009G254900 Sobic009G254900 Sobic002G328300--Sobic009G254900 Sobic002G328300--Sobic005G229700 Sobic002G367400 Sobic002G367400 Sobic002G328300--Sobic002G367400 Sobic008G034500 Sobic008G034500 Sobic002G328300--Sobic008G034500 Sobic009G221400 Sobic009G221400 Sobic002G328300--Sobic009G221400 Sobic009G152200 Sobic009G152200 Sobic001G330700--Sobic009G152200 Sobic001G147200 Sobic001G147200 Sobic001G330700--Sobic001G147200 Sobic003G019200 Sobic003G019200 Sobic001G330700--Sobic003G019200 Sobic001G399100 Sobic001G399100 Sobic001G330700--Sobic001G399100 Sobic004G058000 Sobic004G058000 Sobic001G330700--Sobic004G058000 Sobic009G111600 Sobic009G111600 Sobic001G330700--Sobic009G111600 Sobic005G117400 Sobic005G117400 Sobic001G330700--Sobic005G117400 Sobic008G161000 Sobic008G161000 Sobic001G330700--Sobic008G161000 Sobic003G061900 Sobic003G061900 Sobic001G330700--Sobic003G061900 Sobic009G168900 Sobic009G168900 Sobic002G355100--Sobic009G168900 Sobic002G355100--Sobic001G304700 Sobic001G508466 Sobic001G508466 Sobic002G355100--Sobic001G508466 Sobic002G336600 Sobic002G336600 Sobic002G355100--Sobic002G336600 Sobic002G055600 Sobic002G055600 Sobic002G355100--Sobic002G055600 Sobic005G196800 Sobic005G196800 Sobic002G355100--Sobic005G196800 Sobic004G237800 Sobic004G237800 Sobic002G355100--Sobic004G237800 Sobic010G086200 Sobic010G086200 Sobic002G355100--Sobic010G086200 Sobic004G061200 Sobic004G061200 Sobic002G355100--Sobic004G061200 Sobic006G157500 Sobic006G157500 Sobic003G265200--Sobic006G157500 Sobic003G260300 Sobic003G260300 Sobic003G265200--Sobic003G260300 Sobic002G328400 Sobic002G328400 Sobic003G265200--Sobic002G328400 Sobic001G431500 Sobic001G431500 Sobic003G265200--Sobic001G431500 Sobic003G265200--Sobic002G336600 Sobic001G259900 Sobic001G259900 Sobic003G265200--Sobic001G259900 Sobic009G184000 Sobic009G184000 Sobic003G265200--Sobic009G184000 Sobic003G228900 Sobic003G228900 Sobic003G265200--Sobic003G228900 Sobic003G043600 Sobic003G043600 Sobic003G265200--Sobic003G043600 Sobic002G263800 Sobic002G263800 Sobic009G016201--Sobic002G263800 Sobic009G016201--Sobic007G095400 Sobic008G132800 Sobic008G132800 Sobic009G016201--Sobic008G132800 Sobic009G016201--Sobic004G172700 Sobic009G016201--Sobic003G249800 Sobic009G016201--Sobic001G037000 Sobic009G016201--Sobic008G161000 Sobic010G237000 Sobic010G237000 Sobic009G016201--Sobic010G237000 Sobic010G029400 Sobic010G029400 Sobic009G016201--Sobic010G029400 Sobic001G304700--Sobic005G196800 Sobic001G304700--Sobic002G355100 Sobic001G304700--Sobic002G336600 Sobic001G304700--Sobic004G237800 Sobic001G304700--Sobic003G043600 Sobic003G303100 Sobic003G303100 Sobic001G304700--Sobic003G303100 Sobic001G247300 Sobic001G247300 Sobic001G304700--Sobic001G247300 Sobic002G338500 Sobic002G338500 Sobic001G304700--Sobic002G338500 Sobic003G043500 Sobic003G043500 Sobic001G304700--Sobic003G043500 Sobic005G229700--Sobic003G265200 Sobic001G422900 Sobic001G422900 Sobic005G229700--Sobic001G422900 Sobic002G245800 Sobic002G245800 Sobic005G229700--Sobic002G245800 Sobic005G229700--Sobic001G037000 Sobic005G229700--Sobic001G399100 Sobic003G181500 Sobic003G181500 Sobic005G229700--Sobic003G181500 Sobic005G229700--Sobic002G055600 Sobic009G070400 Sobic009G070400 Sobic005G229700--Sobic009G070400 Sobic002G333400 Sobic002G333400 Sobic005G229700--Sobic002G333400 Sobic001G037000--Sobic003G249800 Sobic003G063200 Sobic003G063200 Sobic001G037000--Sobic003G063200 Sobic001G037000--Sobic001G422900 Sobic010G204600 Sobic010G204600 Sobic001G037000--Sobic010G204600 Sobic001G067601 Sobic001G067601 Sobic001G037000--Sobic001G067601 Sobic001G037000--Sobic009G016201 Sobic001G037000--Sobic003G265200 Sobic002G205300 Sobic002G205300 Sobic001G037000--Sobic002G205300 Sobic001G037000--Sobic003G181500
Octagon: transcription factors


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