Gene annotation
Transcriptome id Sobic.010G168800.1,Sobic.010G168800.2
Synonym Sb10g022160, MIOX1
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
inositol oxygenase, putative, expressed
UniProt A0A194YJP6 , A0A194YJN7
Pfam PF05153
Panther DB PTHR12588 PTHR12588:SF1
NCBI CDD KOG1573; Aldehyde reductase
KEGG Orthology K00469; inositol oxygenase
Gene Ontology GO:0005737; cytoplasm GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT1G14520 : myo-inositol oxygenase 1
RAP-DB (Rice) LOC_Os06g36560.1 : inositol oxygenase, putative, expressed
MaizeGDB (Corn) Zm00025a051026
Brachypodium KQK17977 , KQK17979 , KQK17978
Barley HORVU7Hr1G088260.14 , HORVU7Hr1G088260.11 , HORVU7Hr1G088260.10 , HORVU7Hr1G088260.13 , HORVU7Hr1G088260.12 , HORVU7Hr1G088260.8 , HORVU7Hr1G088260.1 , HORVU7Hr1G088260.3 , HORVU7Hr1G088260.2 , HORVU7Hr1G088260.5 , HORVU7Hr1G088260.4 , HORVU7Hr1G088260.7 , HORVU7Hr1G088260.6
Wheat TraesCS7A02G357800 , TraesCS7A02G357800 , TraesCS7B02G269900 , TraesCS7B02G269900 , TraesCS7D02G364900
Populus -


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cDNA sequences
Sobic.010G168800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G154500 GEM, putative, expressed -
2 Sobic.004G225900 GEM, putative, expressed -
3 Sobic.010G030401 - -
4 Sobic.001G533500 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17777: mitochondrial import inner membrane translocase subunit TIM9
5 Sobic.001G282100 peptide transporter PTR2, putative, expressed -
6 Sobic.004G051700 OTU-like cysteine protease family protein, putative, expressed K13719: OTU1, ubiquitin thioesterase OTU1
7 Sobic.006G154400 GEM, putative, expressed -
8 Sobic.002G328300 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
9 Sobic.001G297000 glycoprotein, putative, expressed -
10 Sobic.006G165400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glutamate dehydrogenase protein, putative, expressed K00261: GLUD1_2, glutamate dehydrogenase (NAD(P)+)
11 Sobic.009G155050 - K14431: transcription factor TGA
12 Sobic.006G158400 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
13 Sobic.001G331200 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
14 Sobic.001G054900 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
15 Sobic.009G180000 OsCam1-3 - Calmodulin, expressed K02183: calmodulin
16 Sobic.002G367400 esterase, putative, expressed -
17 Sobic.003G408100 ribosomal protein L13, putative, expressed K02873: RP-L13e, large subunit ribosomal protein L13e
18 Sobic.009G009600 expressed protein -
19 Sobic.001G462700 expressed protein -
20 Sobic.003G152600 40S ribosomal protein S27a, putative, expressed K02977: RP-S27Ae, RPS27A, ubiquitin-small subunit ribosomal protein S27Ae


Gene co-expression network
sample Sobic010G168800 Sobic010G168800 Sobic006G154500 Sobic006G154500 Sobic010G168800--Sobic006G154500 Sobic004G225900 Sobic004G225900 Sobic010G168800--Sobic004G225900 Sobic010G030401 Sobic010G030401 Sobic010G168800--Sobic010G030401 Sobic001G533500 Sobic001G533500 Sobic010G168800--Sobic001G533500 Sobic001G282100 Sobic001G282100 Sobic010G168800--Sobic001G282100 Sobic004G051700 Sobic004G051700 Sobic010G168800--Sobic004G051700 Sobic006G154400 Sobic006G154400 Sobic010G168800--Sobic006G154400 Sobic002G328300 Sobic002G328300 Sobic010G168800--Sobic002G328300 Sobic001G297000 Sobic001G297000 Sobic010G168800--Sobic001G297000 Sobic006G154500--Sobic006G154400 Sobic009G145500 Sobic009G145500 Sobic006G154500--Sobic009G145500 Sobic003G303100 Sobic003G303100 Sobic006G154500--Sobic003G303100 Sobic004G161751 Sobic004G161751 Sobic006G154500--Sobic004G161751 Sobic003G043600 Sobic003G043600 Sobic006G154500--Sobic003G043600 Sobic001G401100 Sobic001G401100 Sobic006G154500--Sobic001G401100 Sobic010G175800 Sobic010G175800 Sobic006G154500--Sobic010G175800 Sobic002G338500 Sobic002G338500 Sobic006G154500--Sobic002G338500 Sobic004G203700 Sobic004G203700 Sobic006G154500--Sobic004G203700 Sobic001G247600 Sobic001G247600 Sobic004G225900--Sobic001G247600 Sobic002G017800 Sobic002G017800 Sobic004G225900--Sobic002G017800 Sobic001G318500 Sobic001G318500 Sobic004G225900--Sobic001G318500 Sobic009G077800 Sobic009G077800 Sobic004G225900--Sobic009G077800 Sobic002G302500 Sobic002G302500 Sobic004G225900--Sobic002G302500 Sobic010G270500 Sobic010G270500 Sobic004G225900--Sobic010G270500 Sobic009G111000 Sobic009G111000 Sobic004G225900--Sobic009G111000 Sobic002G004900 Sobic002G004900 Sobic004G225900--Sobic002G004900 Sobic001G325400 Sobic001G325400 Sobic004G225900--Sobic001G325400 Sobic007G177100 Sobic007G177100 Sobic010G030401--Sobic007G177100 Sobic009G159200 Sobic009G159200 Sobic010G030401--Sobic009G159200 Sobic003G360000 Sobic003G360000 Sobic010G030401--Sobic003G360000 Sobic002G254200 Sobic002G254200 Sobic010G030401--Sobic002G254200 Sobic006G269200 Sobic006G269200 Sobic010G030401--Sobic006G269200 Sobic009G075900 Sobic009G075900 Sobic010G030401--Sobic009G075900 Sobic009G230100 Sobic009G230100 Sobic010G030401--Sobic009G230100 Sobic010G030401--Sobic006G154500 Sobic009G221400 Sobic009G221400 Sobic010G030401--Sobic009G221400 Sobic007G019000 Sobic007G019000 Sobic001G533500--Sobic007G019000 Sobic007G018300 Sobic007G018300 Sobic001G533500--Sobic007G018300 Sobic010G230700 Sobic010G230700 Sobic001G533500--Sobic010G230700 Sobic001G054900 Sobic001G054900 Sobic001G533500--Sobic001G054900 Sobic009G050300 Sobic009G050300 Sobic001G533500--Sobic009G050300 Sobic007G178600 Sobic007G178600 Sobic001G533500--Sobic007G178600 Sobic006G116700 Sobic006G116700 Sobic001G533500--Sobic006G116700 Sobic004G104100 Sobic004G104100 Sobic001G533500--Sobic004G104100 Sobic004G008400 Sobic004G008400 Sobic001G533500--Sobic004G008400 Sobic002G263800 Sobic002G263800 Sobic001G282100--Sobic002G263800 Sobic001G483100 Sobic001G483100 Sobic001G282100--Sobic001G483100 Sobic004G262200 Sobic004G262200 Sobic001G282100--Sobic004G262200 Sobic009G016201 Sobic009G016201 Sobic001G282100--Sobic009G016201 Sobic003G344600 Sobic003G344600 Sobic001G282100--Sobic003G344600 Sobic001G282100--Sobic004G051700 Sobic001G494000 Sobic001G494000 Sobic001G282100--Sobic001G494000 Sobic010G039800 Sobic010G039800 Sobic001G282100--Sobic010G039800 Sobic001G282100--Sobic001G533500 Sobic010G012500 Sobic010G012500 Sobic004G051700--Sobic010G012500 Sobic002G190900 Sobic002G190900 Sobic004G051700--Sobic002G190900 Sobic001G048832 Sobic001G048832 Sobic004G051700--Sobic001G048832 Sobic007G051000 Sobic007G051000 Sobic004G051700--Sobic007G051000 Sobic004G211833 Sobic004G211833 Sobic004G051700--Sobic004G211833 Sobic002G398901 Sobic002G398901 Sobic004G051700--Sobic002G398901 Sobic002G257300 Sobic002G257300 Sobic004G051700--Sobic002G257300 Sobic002G175100 Sobic002G175100 Sobic004G051700--Sobic002G175100 Sobic010G204500 Sobic010G204500 Sobic004G051700--Sobic010G204500 Sobic006G154400--Sobic006G154500 Sobic006G154400--Sobic010G175800 Sobic006G154400--Sobic004G161751 Sobic010G062300 Sobic010G062300 Sobic006G154400--Sobic010G062300 Sobic002G369400 Sobic002G369400 Sobic006G154400--Sobic002G369400 Sobic003G079200 Sobic003G079200 Sobic006G154400--Sobic003G079200 Sobic009G145600 Sobic009G145600 Sobic006G154400--Sobic009G145600 Sobic009G145700 Sobic009G145700 Sobic006G154400--Sobic009G145700 Sobic006G008000 Sobic006G008000 Sobic006G154400--Sobic006G008000 Sobic003G285500 Sobic003G285500 Sobic002G328300--Sobic003G285500 Sobic009G143400 Sobic009G143400 Sobic002G328300--Sobic009G143400 Sobic003G265200 Sobic003G265200 Sobic002G328300--Sobic003G265200 Sobic006G106800 Sobic006G106800 Sobic002G328300--Sobic006G106800 Sobic009G254900 Sobic009G254900 Sobic002G328300--Sobic009G254900 Sobic005G229700 Sobic005G229700 Sobic002G328300--Sobic005G229700 Sobic002G367400 Sobic002G367400 Sobic002G328300--Sobic002G367400 Sobic008G034500 Sobic008G034500 Sobic002G328300--Sobic008G034500 Sobic002G328300--Sobic009G221400 Sobic001G297000--Sobic001G325400 Sobic006G039100 Sobic006G039100 Sobic001G297000--Sobic006G039100 Sobic001G297000--Sobic009G077800 Sobic001G297000--Sobic002G004900 Sobic003G117600 Sobic003G117600 Sobic001G297000--Sobic003G117600 Sobic009G009600 Sobic009G009600 Sobic001G297000--Sobic009G009600 Sobic007G141500 Sobic007G141500 Sobic001G297000--Sobic007G141500 Sobic010G052700 Sobic010G052700 Sobic001G297000--Sobic010G052700 Sobic001G297000--Sobic004G225900
Octagon: transcription factors


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