Gene annotation
Transcriptome id Sobic.001G439700.2,Sobic.001G439700.3
Synonym Sb01g041340, ADF5, ATADF5
Functional annotation actin-depolymerizing factor, putative, expressed
UniProt A0A1Z5SAI7 , A0A1Z5SAI4
Pfam PF00241
Panther DB PTHR11913 PTHR11913:SF16
NCBI CDD KOG1735; Actin depolymerizing factor
KEGG Orthology K05765; cofilin
Gene Ontology GO:0005622; intracellular GO:0003779actin binding GO:0015629actin cytoskeleton


Orthologs (automatic annotation)
TAIR AT2G16700 : actin depolymerizing factor 5
RAP-DB (Rice) LOC_Os03g13950.1 : actin-depolymerizing factor, putative, expressed
MaizeGDB (Corn) Zm00025a001529 , Zm00025a010273 , Zm00025a040911 , Zm00025a021422 , Zm00025a052910
Brachypodium KQK00663 , PNT77739 , PNT61627 , KQK22600
Barley HORVU4Hr1G063830.7 , HORVU2Hr1G097130.4 , HORVU2Hr1G097130.5 , HORVU2Hr1G097130.1 , HORVU2Hr1G097130.2 , HORVU2Hr1G097130.3 , HORVU4Hr1G063830.8 , HORVU4Hr1G063830.4 , HORVU4Hr1G063830.5 , HORVU4Hr1G063830.6 , HORVU4Hr1G063830.1 , HORVU4Hr1G063830.2 , HORVU4Hr1G063830.3
Wheat TraesCS2D02G408100 , TraesCS4A02G071400 , TraesCS6A02G247000 , TraesCS2A02G410700 , TraesCS6D02G229200 , TraesCS4D02G228100 , TraesCS2B02G429500 , TraesCS4B02G227300 , TraesCS6B02G277600
Populus -


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cDNA sequences
Sobic.001G439700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G083200 eukaryotic translation initiation factor 5A, putative, expressed K03263: translation initiation factor 5A
K02180: cell cycle arrest protein BUB3
2 Sobic.008G161800 proteasome subunit, putative, expressed K03036: PSMD11, 26S proteasome regulatory subunit N6
3 Sobic.001G056700 "O2(rtholog in meize:Hartings et al., 1989)"(PubMedID : 31659831)@bZIP transcription factor domain containing protein, expressed -
4 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
5 Sobic.002G258100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
6 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
7 Sobic.003G124800 26S proteasome non-ATPase regulatory subunit 14, putative, expressed K03030: PSMD14, RPN11, 26S proteasome regulatory subunit N11
8 Sobic.001G143300 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
9 Sobic.003G273100 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
10 Sobic.004G248800 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
11 Sobic.004G203100 SNF7 domain containing protein, putative, expressed K12195: CHMP6, charged multivesicular body protein 6
12 Sobic.002G263800 peptidase, T1 family, putative, expressed K02736: 20S proteasome subunit beta 7
13 Sobic.006G141500 expressed protein -
14 Sobic.006G232200 SNARE domain containing protein, putative, expressed K08501: syntaxin 8
K08503: syntaxin of plants SYP5
15 Sobic.009G068800 expressed protein -
16 Sobic.007G095400 expressed protein -
17 Sobic.003G386100 selenoprotein precursor, putative, expressed -
18 Sobic.002G068300 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
19 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta
20 Sobic.004G298300 ELMO/CED-12 family protein, putative, expressed -


Gene co-expression network
sample Sobic001G439700 Sobic001G439700 Sobic001G083200 Sobic001G083200 Sobic001G439700--Sobic001G083200 Sobic008G161800 Sobic008G161800 Sobic001G439700--Sobic008G161800 Sobic001G056700 Sobic001G056700 Sobic001G439700--Sobic001G056700 Sobic004G300900 Sobic004G300900 Sobic001G439700--Sobic004G300900 Sobic002G258100 Sobic002G258100 Sobic001G439700--Sobic002G258100 Sobic001G529000 Sobic001G529000 Sobic001G439700--Sobic001G529000 Sobic003G124800 Sobic003G124800 Sobic001G439700--Sobic003G124800 Sobic001G143300 Sobic001G143300 Sobic001G439700--Sobic001G143300 Sobic003G273100 Sobic003G273100 Sobic001G439700--Sobic003G273100 Sobic001G083200--Sobic001G529000 Sobic002G373800 Sobic002G373800 Sobic001G083200--Sobic002G373800 Sobic009G036900 Sobic009G036900 Sobic001G083200--Sobic009G036900 Sobic010G042800 Sobic010G042800 Sobic001G083200--Sobic010G042800 Sobic007G163700 Sobic007G163700 Sobic001G083200--Sobic007G163700 Sobic001G040300 Sobic001G040300 Sobic001G083200--Sobic001G040300 Sobic010G039800 Sobic010G039800 Sobic001G083200--Sobic010G039800 Sobic008G132800 Sobic008G132800 Sobic001G083200--Sobic008G132800 Sobic002G263800 Sobic002G263800 Sobic001G083200--Sobic002G263800 Sobic008G161800--Sobic002G263800 Sobic006G141500 Sobic006G141500 Sobic008G161800--Sobic006G141500 Sobic001G415500 Sobic001G415500 Sobic008G161800--Sobic001G415500 Sobic003G253000 Sobic003G253000 Sobic008G161800--Sobic003G253000 Sobic006G108400 Sobic006G108400 Sobic008G161800--Sobic006G108400 Sobic007G095400 Sobic007G095400 Sobic008G161800--Sobic007G095400 Sobic010G154700 Sobic010G154700 Sobic008G161800--Sobic010G154700 Sobic001G132100 Sobic001G132100 Sobic008G161800--Sobic001G132100 Sobic004G248800 Sobic004G248800 Sobic008G161800--Sobic004G248800 Sobic001G471900 Sobic001G471900 Sobic001G056700--Sobic001G471900 Sobic002G291300 Sobic002G291300 Sobic001G056700--Sobic002G291300 Sobic010G228600 Sobic010G228600 Sobic001G056700--Sobic010G228600 Sobic010G144400 Sobic010G144400 Sobic001G056700--Sobic010G144400 Sobic004G164500 Sobic004G164500 Sobic001G056700--Sobic004G164500 Sobic001G082400 Sobic001G082400 Sobic001G056700--Sobic001G082400 Sobic001G371300 Sobic001G371300 Sobic001G056700--Sobic001G371300 Sobic001G056700--Sobic003G273100 Sobic002G278300 Sobic002G278300 Sobic001G056700--Sobic002G278300 Sobic002G078400 Sobic002G078400 Sobic004G300900--Sobic002G078400 Sobic004G300900--Sobic006G141500 Sobic009G198500 Sobic009G198500 Sobic004G300900--Sobic009G198500 Sobic001G331900 Sobic001G331900 Sobic004G300900--Sobic001G331900 Sobic001G005900 Sobic001G005900 Sobic004G300900--Sobic001G005900 Sobic004G225500 Sobic004G225500 Sobic004G300900--Sobic004G225500 Sobic008G058300 Sobic008G058300 Sobic004G300900--Sobic008G058300 Sobic003G115800 Sobic003G115800 Sobic004G300900--Sobic003G115800 Sobic001G445800 Sobic001G445800 Sobic004G300900--Sobic001G445800 Sobic002G175500 Sobic002G175500 Sobic002G258100--Sobic002G175500 Sobic008G107500 Sobic008G107500 Sobic002G258100--Sobic008G107500 Sobic002G258100--Sobic010G144400 Sobic001G010400 Sobic001G010400 Sobic002G258100--Sobic001G010400 Sobic001G023200 Sobic001G023200 Sobic002G258100--Sobic001G023200 Sobic001G253600 Sobic001G253600 Sobic002G258100--Sobic001G253600 Sobic002G258100--Sobic001G056700 Sobic004G172700 Sobic004G172700 Sobic002G258100--Sobic004G172700 Sobic001G393800 Sobic001G393800 Sobic002G258100--Sobic001G393800 Sobic003G362400 Sobic003G362400 Sobic001G529000--Sobic003G362400 Sobic001G529000--Sobic004G248800 Sobic001G529000--Sobic003G124800 Sobic001G529000--Sobic001G331900 Sobic005G157200 Sobic005G157200 Sobic001G529000--Sobic005G157200 Sobic001G529000--Sobic007G163700 Sobic001G529000--Sobic010G039800 Sobic007G203700 Sobic007G203700 Sobic001G529000--Sobic007G203700 Sobic001G529000--Sobic004G300900 Sobic003G124800--Sobic009G198500 Sobic001G439600 Sobic001G439600 Sobic003G124800--Sobic001G439600 Sobic006G232200 Sobic006G232200 Sobic003G124800--Sobic006G232200 Sobic001G502200 Sobic001G502200 Sobic003G124800--Sobic001G502200 Sobic007G045600 Sobic007G045600 Sobic003G124800--Sobic007G045600 Sobic003G124800--Sobic001G529000 Sobic007G168600 Sobic007G168600 Sobic003G124800--Sobic007G168600 Sobic006G150600 Sobic006G150600 Sobic003G124800--Sobic006G150600 Sobic004G066800 Sobic004G066800 Sobic003G124800--Sobic004G066800 Sobic001G143300--Sobic006G232200 Sobic007G096700 Sobic007G096700 Sobic001G143300--Sobic007G096700 Sobic001G143300--Sobic003G124800 Sobic004G224800 Sobic004G224800 Sobic001G143300--Sobic004G224800 Sobic001G143300--Sobic009G198500 Sobic010G083700 Sobic010G083700 Sobic001G143300--Sobic010G083700 Sobic001G143300--Sobic007G045600 Sobic003G007500 Sobic003G007500 Sobic001G143300--Sobic003G007500 Sobic004G130900 Sobic004G130900 Sobic001G143300--Sobic004G130900 Sobic003G273100--Sobic001G371300 Sobic001G149700 Sobic001G149700 Sobic003G273100--Sobic001G149700 Sobic001G478300 Sobic001G478300 Sobic003G273100--Sobic001G478300 Sobic004G274700 Sobic004G274700 Sobic003G273100--Sobic004G274700 Sobic003G273100--Sobic002G291300 Sobic001G427800 Sobic001G427800 Sobic003G273100--Sobic001G427800 Sobic004G231400 Sobic004G231400 Sobic003G273100--Sobic004G231400 Sobic007G126200 Sobic007G126200 Sobic003G273100--Sobic007G126200 Sobic004G079100 Sobic004G079100 Sobic003G273100--Sobic004G079100
Octagon: transcription factors


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