Gene annotation
Transcriptome id Sobic.001G253600.1,Sobic.001G253600.2
Synonym Sb01g022390
Functional annotation expressed protein
UniProt A0A1B6QKX9 , A0A1B6QKZ9
Pfam PF05627
Panther DB PTHR33882 PTHR33882:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G64850 : -
RAP-DB (Rice) LOC_Os10g26540.1 : expressed protein
MaizeGDB (Corn) Zm00025a000856 , Zm00025a053338 , Zm00025a007003 , Zm00025a017815
Brachypodium KQK23427 , PNT67356
Barley HORVU6Hr1G053790.1 , HORVU2Hr1G071440.4 , HORVU2Hr1G071440.1 , HORVU2Hr1G071440.2 , HORVU2Hr1G071440.3 , HORVU4Hr1G075110.1 , HORVU4Hr1G075110.2 , HORVU4Hr1G075110.3 , HORVU2Hr1G087230.1 , HORVU5Hr1G046790.1 , HORVU3Hr1G059370.1 , HORVU5Hr1G029200.5
Wheat TraesCS4D02G285600 , TraesCS4A02G017200 , TraesCS4B02G286900
Populus -


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cDNA sequences
Sobic.001G253600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G228600 LSM domain containing protein, expressed -
2 Sobic.010G144400 glycosyltransferase, putative, expressed -
3 Sobic.001G056700 "O2(rtholog in meize:Hartings et al., 1989)"(PubMedID : 31659831)@bZIP transcription factor domain containing protein, expressed -
4 Sobic.002G258100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
5 Sobic.001G471900 C2 domain containing protein, putative, expressed -
6 Sobic.001G149700 vesicle transport v-SNARE protein, putative, expressed K08496: GOSR2, golgi SNAP receptor complex member 2
7 Sobic.008G106800 isoflavone reductase, putative, expressed -
8 Sobic.007G126200 mitosis protein dim1, putative, expressed K12859: TXNL4A, U5 snRNP protein, DIM1 family
9 Sobic.003G116700 hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.001G467000 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
11 Sobic.004G172700 plant neutral invertase domain containing protein, expressed -
12 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta
13 Sobic.002G068300 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
14 Sobic.003G000800 RWP-RK domain-containing protein, putative, expressed -
15 Sobic.001G076000 PHLOEM 2-LIKE A10, putative, expressed -
16 Sobic.003G273100 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
17 Sobic.004G164500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
18 Sobic.001G428400 - K12826: SF3A2, splicing factor 3A subunit 2
19 Sobic.007G007900 mago nashi, putative, expressed K12877: protein mago nashi
20 Sobic.003G107400 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase


Gene co-expression network
sample Sobic001G253600 Sobic001G253600 Sobic010G228600 Sobic010G228600 Sobic001G253600--Sobic010G228600 Sobic010G144400 Sobic010G144400 Sobic001G253600--Sobic010G144400 Sobic001G056700 Sobic001G056700 Sobic001G253600--Sobic001G056700 Sobic002G258100 Sobic002G258100 Sobic001G253600--Sobic002G258100 Sobic001G471900 Sobic001G471900 Sobic001G253600--Sobic001G471900 Sobic001G149700 Sobic001G149700 Sobic001G253600--Sobic001G149700 Sobic008G106800 Sobic008G106800 Sobic001G253600--Sobic008G106800 Sobic007G126200 Sobic007G126200 Sobic001G253600--Sobic007G126200 Sobic003G116700 Sobic003G116700 Sobic001G253600--Sobic003G116700 Sobic009G036900 Sobic009G036900 Sobic010G228600--Sobic009G036900 Sobic002G068300 Sobic002G068300 Sobic010G228600--Sobic002G068300 Sobic010G228600--Sobic001G056700 Sobic010G228600--Sobic001G471900 Sobic010G228600--Sobic010G144400 Sobic010G071200 Sobic010G071200 Sobic010G228600--Sobic010G071200 Sobic009G034400 Sobic009G034400 Sobic010G228600--Sobic009G034400 Sobic010G228600--Sobic001G149700 Sobic004G164500 Sobic004G164500 Sobic010G228600--Sobic004G164500 Sobic010G144400--Sobic002G068300 Sobic010G144400--Sobic001G056700 Sobic010G144400--Sobic010G228600 Sobic004G172700 Sobic004G172700 Sobic010G144400--Sobic004G172700 Sobic001G090000 Sobic001G090000 Sobic010G144400--Sobic001G090000 Sobic009G016201 Sobic009G016201 Sobic010G144400--Sobic009G016201 Sobic010G144400--Sobic002G258100 Sobic010G144400--Sobic001G471900 Sobic010G144400--Sobic001G253600 Sobic001G056700--Sobic001G471900 Sobic002G291300 Sobic002G291300 Sobic001G056700--Sobic002G291300 Sobic001G056700--Sobic010G228600 Sobic001G056700--Sobic010G144400 Sobic001G056700--Sobic004G164500 Sobic001G082400 Sobic001G082400 Sobic001G056700--Sobic001G082400 Sobic001G371300 Sobic001G371300 Sobic001G056700--Sobic001G371300 Sobic003G273100 Sobic003G273100 Sobic001G056700--Sobic003G273100 Sobic002G278300 Sobic002G278300 Sobic001G056700--Sobic002G278300 Sobic002G175500 Sobic002G175500 Sobic002G258100--Sobic002G175500 Sobic008G107500 Sobic008G107500 Sobic002G258100--Sobic008G107500 Sobic002G258100--Sobic010G144400 Sobic001G010400 Sobic001G010400 Sobic002G258100--Sobic001G010400 Sobic001G023200 Sobic001G023200 Sobic002G258100--Sobic001G023200 Sobic002G258100--Sobic001G253600 Sobic002G258100--Sobic001G056700 Sobic002G258100--Sobic004G172700 Sobic001G393800 Sobic001G393800 Sobic002G258100--Sobic001G393800 Sobic001G471900--Sobic001G056700 Sobic001G471900--Sobic004G164500 Sobic001G471900--Sobic008G106800 Sobic001G471900--Sobic010G228600 Sobic010G154150 Sobic010G154150 Sobic001G471900--Sobic010G154150 Sobic001G471900--Sobic002G291300 Sobic006G257900 Sobic006G257900 Sobic001G471900--Sobic006G257900 Sobic001G471900--Sobic010G144400 Sobic001G471900--Sobic003G273100 Sobic001G149700--Sobic010G071200 Sobic010G055500 Sobic010G055500 Sobic001G149700--Sobic010G055500 Sobic004G231400 Sobic004G231400 Sobic001G149700--Sobic004G231400 Sobic001G478300 Sobic001G478300 Sobic001G149700--Sobic001G478300 Sobic001G149700--Sobic006G257900 Sobic008G142700 Sobic008G142700 Sobic001G149700--Sobic008G142700 Sobic001G149700--Sobic003G273100 Sobic001G076000 Sobic001G076000 Sobic001G149700--Sobic001G076000 Sobic001G512900 Sobic001G512900 Sobic001G149700--Sobic001G512900 Sobic008G106800--Sobic004G164500 Sobic008G106800--Sobic001G471900 Sobic008G106800--Sobic001G056700 Sobic009G065000 Sobic009G065000 Sobic008G106800--Sobic009G065000 Sobic008G106800--Sobic003G273100 Sobic003G137400 Sobic003G137400 Sobic008G106800--Sobic003G137400 Sobic001G311000 Sobic001G311000 Sobic008G106800--Sobic001G311000 Sobic008G106800--Sobic002G278300 Sobic001G230700 Sobic001G230700 Sobic008G106800--Sobic001G230700 Sobic007G126200--Sobic001G149700 Sobic007G126200--Sobic010G071200 Sobic007G126200--Sobic009G036900 Sobic007G126200--Sobic003G273100 Sobic007G126200--Sobic004G231400 Sobic007G126200--Sobic010G055500 Sobic007G126200--Sobic003G116700 Sobic007G126200--Sobic002G068300 Sobic001G350501 Sobic001G350501 Sobic007G126200--Sobic001G350501 Sobic001G206000 Sobic001G206000 Sobic003G116700--Sobic001G206000 Sobic003G116700--Sobic001G149700 Sobic001G441600 Sobic001G441600 Sobic003G116700--Sobic001G441600 Sobic007G079700 Sobic007G079700 Sobic003G116700--Sobic007G079700 Sobic004G014000 Sobic004G014000 Sobic003G116700--Sobic004G014000 Sobic003G116700--Sobic007G126200 Sobic003G116700--Sobic009G065000 Sobic003G116700--Sobic010G055500 Sobic001G078500 Sobic001G078500 Sobic003G116700--Sobic001G078500
Octagon: transcription factors


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