Gene annotation
Transcriptome id Sobic.003G107400.1
Synonym HYD1, Sb03g009020
Functional annotation 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed
UniProt C5XF34
Pfam PF05241
Panther DB PTHR14207 PTHR14207:SF0
NCBI CDD KOG4826; C-8,7 sterol isomerase
KEGG Orthology K01824; cholestenol Delta-isomerase
Gene Ontology GO:0016125; sterol metabolic process GO:0016021integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G20050 : C-8,7 sterol isomerase
RAP-DB (Rice) LOC_Os01g01369.1 : 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed
MaizeGDB (Corn) Zm00025a035390
Brachypodium KQK02761
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G072800 expressed protein -
2 Sobic.001G253600 expressed protein -
3 Sobic.004G152400 ribosomal protein L29, putative, expressed K02918: RP-L35e, large subunit ribosomal protein L35e
4 Sobic.009G032300 CGMC_GSK.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
5 Sobic.004G349000 deoxyhypusine hydroxylase, putative, expressed K06072: deoxyhypusine monooxygenase
6 Sobic.001G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
7 Sobic.010G144400 glycosyltransferase, putative, expressed -
8 Sobic.001G429400 wibg, putative, expressed K14294: WIBG, partner of Y14 and mago
9 Sobic.002G278300 thaumatin, putative, expressed -
10 Sobic.010G228600 LSM domain containing protein, expressed -
11 Sobic.002G382950 - -
12 Sobic.003G043100 ribosome biogenesis regulatory protein, putative, expressed K14852: regulator of ribosome biosynthesis
13 Sobic.003G079750 - -
14 Sobic.008G106800 isoflavone reductase, putative, expressed -
15 Sobic.003G137400 OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
16 Sobic.006G255100 peptidyl-prolyl cis-trans isomerase, putative, expressed K09578: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
17 Sobic.001G478300 modifier of rudimentary protein, expressed K12185: ESCRT-I complex subunit VPS37
18 Sobic.001G427800 tyrosine protein kinase domain containing protein, putative, expressed -
19 Sobic.010G144000 AP-3 complex subunit delta, putative, expressed K12396: AP-3 complex subunit delta
20 Sobic.003G107600 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase


Gene co-expression network
sample Sobic003G107400 Sobic003G107400 Sobic004G072800 Sobic004G072800 Sobic003G107400--Sobic004G072800 Sobic001G253600 Sobic001G253600 Sobic003G107400--Sobic001G253600 Sobic004G152400 Sobic004G152400 Sobic003G107400--Sobic004G152400 Sobic009G032300 Sobic009G032300 Sobic003G107400--Sobic009G032300 Sobic004G349000 Sobic004G349000 Sobic003G107400--Sobic004G349000 Sobic001G341300 Sobic001G341300 Sobic003G107400--Sobic001G341300 Sobic010G144400 Sobic010G144400 Sobic003G107400--Sobic010G144400 Sobic001G429400 Sobic001G429400 Sobic003G107400--Sobic001G429400 Sobic002G278300 Sobic002G278300 Sobic003G107400--Sobic002G278300 Sobic001G067900 Sobic001G067900 Sobic004G072800--Sobic001G067900 Sobic003G350600 Sobic003G350600 Sobic004G072800--Sobic003G350600 Sobic003G007500 Sobic003G007500 Sobic004G072800--Sobic003G007500 Sobic002G313500 Sobic002G313500 Sobic004G072800--Sobic002G313500 Sobic007G118000 Sobic007G118000 Sobic004G072800--Sobic007G118000 Sobic001G522900 Sobic001G522900 Sobic004G072800--Sobic001G522900 Sobic002G281300 Sobic002G281300 Sobic004G072800--Sobic002G281300 Sobic004G072800--Sobic001G429400 Sobic003G045400 Sobic003G045400 Sobic004G072800--Sobic003G045400 Sobic010G228600 Sobic010G228600 Sobic001G253600--Sobic010G228600 Sobic001G253600--Sobic010G144400 Sobic001G056700 Sobic001G056700 Sobic001G253600--Sobic001G056700 Sobic002G258100 Sobic002G258100 Sobic001G253600--Sobic002G258100 Sobic001G471900 Sobic001G471900 Sobic001G253600--Sobic001G471900 Sobic001G149700 Sobic001G149700 Sobic001G253600--Sobic001G149700 Sobic008G106800 Sobic008G106800 Sobic001G253600--Sobic008G106800 Sobic007G126200 Sobic007G126200 Sobic001G253600--Sobic007G126200 Sobic003G116700 Sobic003G116700 Sobic001G253600--Sobic003G116700 Sobic002G258800 Sobic002G258800 Sobic004G152400--Sobic002G258800 Sobic004G152700 Sobic004G152700 Sobic004G152400--Sobic004G152700 Sobic002G259000 Sobic002G259000 Sobic004G152400--Sobic002G259000 Sobic010G182300 Sobic010G182300 Sobic004G152400--Sobic010G182300 Sobic004G103800 Sobic004G103800 Sobic004G152400--Sobic004G103800 Sobic003G107600 Sobic003G107600 Sobic004G152400--Sobic003G107600 Sobic001G505100 Sobic001G505100 Sobic004G152400--Sobic001G505100 Sobic010G029400 Sobic010G029400 Sobic004G152400--Sobic010G029400 Sobic010G259900 Sobic010G259900 Sobic004G152400--Sobic010G259900 Sobic010G264400 Sobic010G264400 Sobic009G032300--Sobic010G264400 Sobic006G130200 Sobic006G130200 Sobic009G032300--Sobic006G130200 Sobic006G092800 Sobic006G092800 Sobic009G032300--Sobic006G092800 Sobic010G174800 Sobic010G174800 Sobic009G032300--Sobic010G174800 Sobic006G128800 Sobic006G128800 Sobic009G032300--Sobic006G128800 Sobic002G197100 Sobic002G197100 Sobic009G032300--Sobic002G197100 Sobic007G115900 Sobic007G115900 Sobic009G032300--Sobic007G115900 Sobic001G221100 Sobic001G221100 Sobic009G032300--Sobic001G221100 Sobic007G191100 Sobic007G191100 Sobic009G032300--Sobic007G191100 Sobic010G071200 Sobic010G071200 Sobic004G349000--Sobic010G071200 Sobic001G478300 Sobic001G478300 Sobic004G349000--Sobic001G478300 Sobic003G043100 Sobic003G043100 Sobic004G349000--Sobic003G043100 Sobic001G083600 Sobic001G083600 Sobic004G349000--Sobic001G083600 Sobic004G349000--Sobic004G072800 Sobic010G055500 Sobic010G055500 Sobic004G349000--Sobic010G055500 Sobic002G045400 Sobic002G045400 Sobic004G349000--Sobic002G045400 Sobic009G036900 Sobic009G036900 Sobic004G349000--Sobic009G036900 Sobic004G231400 Sobic004G231400 Sobic004G349000--Sobic004G231400 Sobic002G376400 Sobic002G376400 Sobic001G341300--Sobic002G376400 Sobic006G159400 Sobic006G159400 Sobic001G341300--Sobic006G159400 Sobic004G216700 Sobic004G216700 Sobic001G341300--Sobic004G216700 Sobic009G159700 Sobic009G159700 Sobic001G341300--Sobic009G159700 Sobic008G185900 Sobic008G185900 Sobic001G341300--Sobic008G185900 Sobic009G166801 Sobic009G166801 Sobic001G341300--Sobic009G166801 Sobic001G341300--Sobic001G253600 Sobic001G516500 Sobic001G516500 Sobic001G341300--Sobic001G516500 Sobic005G172300 Sobic005G172300 Sobic001G341300--Sobic005G172300 Sobic002G068300 Sobic002G068300 Sobic010G144400--Sobic002G068300 Sobic010G144400--Sobic001G056700 Sobic010G144400--Sobic010G228600 Sobic004G172700 Sobic004G172700 Sobic010G144400--Sobic004G172700 Sobic001G090000 Sobic001G090000 Sobic010G144400--Sobic001G090000 Sobic009G016201 Sobic009G016201 Sobic010G144400--Sobic009G016201 Sobic010G144400--Sobic002G258100 Sobic010G144400--Sobic001G471900 Sobic010G144400--Sobic001G253600 Sobic001G429400--Sobic004G072800 Sobic003G024800 Sobic003G024800 Sobic001G429400--Sobic003G024800 Sobic010G211300 Sobic010G211300 Sobic001G429400--Sobic010G211300 Sobic001G429400--Sobic003G045400 Sobic001G429400--Sobic003G043100 Sobic001G427800 Sobic001G427800 Sobic001G429400--Sobic001G427800 Sobic009G140700 Sobic009G140700 Sobic001G429400--Sobic009G140700 Sobic002G272600 Sobic002G272600 Sobic001G429400--Sobic002G272600 Sobic004G263900 Sobic004G263900 Sobic001G429400--Sobic004G263900 Sobic003G436800 Sobic003G436800 Sobic002G278300--Sobic003G436800 Sobic009G055100 Sobic009G055100 Sobic002G278300--Sobic009G055100 Sobic009G040900 Sobic009G040900 Sobic002G278300--Sobic009G040900 Sobic009G159200 Sobic009G159200 Sobic002G278300--Sobic009G159200 Sobic002G278300--Sobic001G056700 Sobic009G166700 Sobic009G166700 Sobic002G278300--Sobic009G166700 Sobic007G177100 Sobic007G177100 Sobic002G278300--Sobic007G177100 Sobic004G069200 Sobic004G069200 Sobic002G278300--Sobic004G069200 Sobic009G075900 Sobic009G075900 Sobic002G278300--Sobic009G075900
Octagon: transcription factors


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