Gene annotation
Transcriptome id Sobic.004G349000.1,Sobic.004G349000.2
Synonym Sb04g037570
Functional annotation deoxyhypusine hydroxylase, putative, expressed
UniProt A0A1Z5RQV1 , C5XW00
Pfam PF13646
Panther DB PTHR12697
NCBI CDD KOG0567; HEAT repeat-containing protein
KEGG Orthology K06072; deoxyhypusine monooxygenase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G58180 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os12g06620.1 : deoxyhypusine hydroxylase, putative, expressed
MaizeGDB (Corn) Zm00025a022633
Brachypodium KQK01416
Barley HORVU6Hr1G091710.2 , HORVU6Hr1G091710.3 , HORVU6Hr1G091710.1 , HORVU6Hr1G091710.4
Wheat TraesCS6D02G383200 , TraesCS6D02G383200 , TraesCS6A02G399000 , TraesCS6B02G439300 , TraesCS6D02G360400
Populus -


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cDNA sequences
Sobic.004G349000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
2 Sobic.001G478300 modifier of rudimentary protein, expressed K12185: ESCRT-I complex subunit VPS37
3 Sobic.003G043100 ribosome biogenesis regulatory protein, putative, expressed K14852: regulator of ribosome biosynthesis
4 Sobic.001G083600 26S proteasome non-ATPase regulatory subunit 10, putative, expressed K06694: 26S proteasome non-ATPase regulatory subunit 10
5 Sobic.004G072800 expressed protein -
6 Sobic.010G055500 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
7 Sobic.002G045400 MBTB13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
8 Sobic.009G036900 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
9 Sobic.004G231400 OsAPRL3 adenosine 5\'-phosphosulfate reductase-like OsAPRL3, expressed -
10 Sobic.008G142700 expressed protein -
11 Sobic.010G228600 LSM domain containing protein, expressed -
12 Sobic.003G416600 mitochondrial carrier protein, putative, expressed K15108: SLC25A19, DNC, solute carrier family 25 (mitochondrial thiamine pyrophosphate transporter), member 19
13 Sobic.001G390500 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
14 Sobic.001G341100 mps one binder kinase activator-like 1A, putative, expressed K06685: MOB1, MOB kinase activator 1
15 Sobic.003G350600 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
16 Sobic.003G107400 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase
17 Sobic.002G411300 expressed protein -
18 Sobic.005G122900 - -
19 Sobic.008G020200 UDP-N-acetylglucosamine transferase subunit ALG14, putative, expressed K07441: beta-1,4-N-acetylglucosaminyltransferase
20 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -


Gene co-expression network
sample Sobic004G349000 Sobic004G349000 Sobic010G071200 Sobic010G071200 Sobic004G349000--Sobic010G071200 Sobic001G478300 Sobic001G478300 Sobic004G349000--Sobic001G478300 Sobic003G043100 Sobic003G043100 Sobic004G349000--Sobic003G043100 Sobic001G083600 Sobic001G083600 Sobic004G349000--Sobic001G083600 Sobic004G072800 Sobic004G072800 Sobic004G349000--Sobic004G072800 Sobic010G055500 Sobic010G055500 Sobic004G349000--Sobic010G055500 Sobic002G045400 Sobic002G045400 Sobic004G349000--Sobic002G045400 Sobic009G036900 Sobic009G036900 Sobic004G349000--Sobic009G036900 Sobic004G231400 Sobic004G231400 Sobic004G349000--Sobic004G231400 Sobic010G071200--Sobic010G055500 Sobic001G149700 Sobic001G149700 Sobic010G071200--Sobic001G149700 Sobic010G071200--Sobic004G231400 Sobic004G263900 Sobic004G263900 Sobic010G071200--Sobic004G263900 Sobic008G142700 Sobic008G142700 Sobic010G071200--Sobic008G142700 Sobic001G512900 Sobic001G512900 Sobic010G071200--Sobic001G512900 Sobic010G071200--Sobic001G478300 Sobic006G257900 Sobic006G257900 Sobic010G071200--Sobic006G257900 Sobic010G071200--Sobic001G083600 Sobic001G478300--Sobic004G231400 Sobic001G478300--Sobic010G071200 Sobic006G209500 Sobic006G209500 Sobic001G478300--Sobic006G209500 Sobic001G427800 Sobic001G427800 Sobic001G478300--Sobic001G427800 Sobic001G478300--Sobic001G149700 Sobic001G478300--Sobic010G055500 Sobic001G478300--Sobic004G263900 Sobic003G273100 Sobic003G273100 Sobic001G478300--Sobic003G273100 Sobic004G274700 Sobic004G274700 Sobic001G478300--Sobic004G274700 Sobic001G428400 Sobic001G428400 Sobic003G043100--Sobic001G428400 Sobic009G178600 Sobic009G178600 Sobic003G043100--Sobic009G178600 Sobic006G242300 Sobic006G242300 Sobic003G043100--Sobic006G242300 Sobic004G077000 Sobic004G077000 Sobic003G043100--Sobic004G077000 Sobic001G429400 Sobic001G429400 Sobic003G043100--Sobic001G429400 Sobic003G043100--Sobic001G083600 Sobic003G043100--Sobic004G072800 Sobic004G006300 Sobic004G006300 Sobic003G043100--Sobic004G006300 Sobic001G390500 Sobic001G390500 Sobic003G043100--Sobic001G390500 Sobic001G083600--Sobic001G390500 Sobic001G083600--Sobic010G071200 Sobic001G083600--Sobic004G263900 Sobic001G083600--Sobic001G512900 Sobic001G083600--Sobic010G055500 Sobic008G174300 Sobic008G174300 Sobic001G083600--Sobic008G174300 Sobic002G084300 Sobic002G084300 Sobic001G083600--Sobic002G084300 Sobic001G056200 Sobic001G056200 Sobic001G083600--Sobic001G056200 Sobic010G211300 Sobic010G211300 Sobic001G083600--Sobic010G211300 Sobic001G067900 Sobic001G067900 Sobic004G072800--Sobic001G067900 Sobic003G350600 Sobic003G350600 Sobic004G072800--Sobic003G350600 Sobic003G007500 Sobic003G007500 Sobic004G072800--Sobic003G007500 Sobic002G313500 Sobic002G313500 Sobic004G072800--Sobic002G313500 Sobic007G118000 Sobic007G118000 Sobic004G072800--Sobic007G118000 Sobic001G522900 Sobic001G522900 Sobic004G072800--Sobic001G522900 Sobic002G281300 Sobic002G281300 Sobic004G072800--Sobic002G281300 Sobic004G072800--Sobic001G429400 Sobic003G045400 Sobic003G045400 Sobic004G072800--Sobic003G045400 Sobic010G055500--Sobic010G071200 Sobic010G055500--Sobic004G263900 Sobic010G055500--Sobic001G149700 Sobic010G055500--Sobic004G231400 Sobic010G055500--Sobic001G512900 Sobic006G109300 Sobic006G109300 Sobic010G055500--Sobic006G109300 Sobic010G055500--Sobic001G390500 Sobic010G055500--Sobic008G142700 Sobic004G150400 Sobic004G150400 Sobic010G055500--Sobic004G150400 Sobic008G073000 Sobic008G073000 Sobic002G045400--Sobic008G073000 Sobic003G355000 Sobic003G355000 Sobic002G045400--Sobic003G355000 Sobic003G433500 Sobic003G433500 Sobic002G045400--Sobic003G433500 Sobic002G045400--Sobic008G174300 Sobic008G101800 Sobic008G101800 Sobic002G045400--Sobic008G101800 Sobic009G198100 Sobic009G198100 Sobic002G045400--Sobic009G198100 Sobic009G216000 Sobic009G216000 Sobic002G045400--Sobic009G216000 Sobic010G202600 Sobic010G202600 Sobic002G045400--Sobic010G202600 Sobic005G030300 Sobic005G030300 Sobic002G045400--Sobic005G030300 Sobic002G068300 Sobic002G068300 Sobic009G036900--Sobic002G068300 Sobic009G034400 Sobic009G034400 Sobic009G036900--Sobic009G034400 Sobic006G256500 Sobic006G256500 Sobic009G036900--Sobic006G256500 Sobic003G024800 Sobic003G024800 Sobic009G036900--Sobic003G024800 Sobic010G228600 Sobic010G228600 Sobic009G036900--Sobic010G228600 Sobic010G039800 Sobic010G039800 Sobic009G036900--Sobic010G039800 Sobic001G529000 Sobic001G529000 Sobic009G036900--Sobic001G529000 Sobic009G036900--Sobic010G071200 Sobic001G424500 Sobic001G424500 Sobic009G036900--Sobic001G424500 Sobic004G231400--Sobic010G055500 Sobic004G231400--Sobic010G071200 Sobic004G231400--Sobic001G478300 Sobic004G231400--Sobic001G149700 Sobic004G231400--Sobic004G274700 Sobic006G088100 Sobic006G088100 Sobic004G231400--Sobic006G088100 Sobic004G231400--Sobic006G257900 Sobic004G231400--Sobic004G150400 Sobic004G231400--Sobic006G209500
Octagon: transcription factors


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