Gene annotation
Transcriptome id Sobic.002G411300.1,Sobic.002G411300.2
Synonym Sb02g042410
Functional annotation expressed protein
UniProt A0A1B6QG86 , C5X4X2
Pfam -
Panther DB PTHR37255 PTHR37255:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G18540 : -
RAP-DB (Rice) LOC_Os07g47340.1 : expressed protein
MaizeGDB (Corn) Zm00025a049100
Brachypodium KQK14790 , KQK14789
Barley -
Wheat TraesCS2A02G116800 , TraesCS2D02G118300 , TraesCS2B02G136000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G073600 PHD finger protein, putative, expressed -
2 Sobic.001G478300 modifier of rudimentary protein, expressed K12185: ESCRT-I complex subunit VPS37
3 Sobic.010G058500 vesicle-associated membrane protein, putative, expressed K08515: vesicle-associated membrane protein 7
4 Sobic.004G203100 SNF7 domain containing protein, putative, expressed K12195: CHMP6, charged multivesicular body protein 6
5 Sobic.001G427800 tyrosine protein kinase domain containing protein, putative, expressed -
6 Sobic.010G144400 glycosyltransferase, putative, expressed -
7 Sobic.004G349000 deoxyhypusine hydroxylase, putative, expressed K06072: deoxyhypusine monooxygenase
8 Sobic.009G036900 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
9 Sobic.004G153200 ZOS2-07 - C2H2 zinc finger protein, expressed -
10 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
11 Sobic.008G075900 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
12 Sobic.009G237600 transcription factor, putative, expressed K09060: plant G-box-binding factor
13 Sobic.001G380400 reticulon domain containing protein, putative, expressed -
14 Sobic.009G157900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
15 Sobic.007G180100 bifunctional aminoacyl-tRNA synthetase, putative, expressed K01881: PARS, prolyl-tRNA synthetase
16 Sobic.001G162000 prefoldin subunit, putative, expressed K09550: prefoldin subunit 4
17 Sobic.003G043100 ribosome biogenesis regulatory protein, putative, expressed K14852: regulator of ribosome biosynthesis
18 Sobic.008G180900 YIF1B, putative, expressed -
19 Sobic.006G256500 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
20 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2


Gene co-expression network
sample Sobic002G411300 Sobic002G411300 Sobic008G073600 Sobic008G073600 Sobic002G411300--Sobic008G073600 Sobic001G478300 Sobic001G478300 Sobic002G411300--Sobic001G478300 Sobic010G058500 Sobic010G058500 Sobic002G411300--Sobic010G058500 Sobic004G203100 Sobic004G203100 Sobic002G411300--Sobic004G203100 Sobic001G427800 Sobic001G427800 Sobic002G411300--Sobic001G427800 Sobic010G144400 Sobic010G144400 Sobic002G411300--Sobic010G144400 Sobic004G349000 Sobic004G349000 Sobic002G411300--Sobic004G349000 Sobic009G036900 Sobic009G036900 Sobic002G411300--Sobic009G036900 Sobic004G153200 Sobic004G153200 Sobic002G411300--Sobic004G153200 Sobic009G028800 Sobic009G028800 Sobic008G073600--Sobic009G028800 Sobic009G228800 Sobic009G228800 Sobic008G073600--Sobic009G228800 Sobic004G356900 Sobic004G356900 Sobic008G073600--Sobic004G356900 Sobic001G031200 Sobic001G031200 Sobic008G073600--Sobic001G031200 Sobic003G226500 Sobic003G226500 Sobic008G073600--Sobic003G226500 Sobic001G512600 Sobic001G512600 Sobic008G073600--Sobic001G512600 Sobic009G133400 Sobic009G133400 Sobic008G073600--Sobic009G133400 Sobic004G226800 Sobic004G226800 Sobic008G073600--Sobic004G226800 Sobic006G252300 Sobic006G252300 Sobic008G073600--Sobic006G252300 Sobic004G231400 Sobic004G231400 Sobic001G478300--Sobic004G231400 Sobic010G071200 Sobic010G071200 Sobic001G478300--Sobic010G071200 Sobic006G209500 Sobic006G209500 Sobic001G478300--Sobic006G209500 Sobic001G478300--Sobic001G427800 Sobic001G149700 Sobic001G149700 Sobic001G478300--Sobic001G149700 Sobic010G055500 Sobic010G055500 Sobic001G478300--Sobic010G055500 Sobic004G263900 Sobic004G263900 Sobic001G478300--Sobic004G263900 Sobic003G273100 Sobic003G273100 Sobic001G478300--Sobic003G273100 Sobic004G274700 Sobic004G274700 Sobic001G478300--Sobic004G274700 Sobic001G051200 Sobic001G051200 Sobic010G058500--Sobic001G051200 Sobic007G186300 Sobic007G186300 Sobic010G058500--Sobic007G186300 Sobic003G007500 Sobic003G007500 Sobic010G058500--Sobic003G007500 Sobic001G067900 Sobic001G067900 Sobic010G058500--Sobic001G067900 Sobic006G254700 Sobic006G254700 Sobic010G058500--Sobic006G254700 Sobic003G261400 Sobic003G261400 Sobic010G058500--Sobic003G261400 Sobic003G115800 Sobic003G115800 Sobic010G058500--Sobic003G115800 Sobic009G154800 Sobic009G154800 Sobic010G058500--Sobic009G154800 Sobic004G234900 Sobic004G234900 Sobic010G058500--Sobic004G234900 Sobic010G168600 Sobic010G168600 Sobic004G203100--Sobic010G168600 Sobic004G203100--Sobic003G007500 Sobic002G352700 Sobic002G352700 Sobic004G203100--Sobic002G352700 Sobic004G203100--Sobic001G478300 Sobic008G180900 Sobic008G180900 Sobic004G203100--Sobic008G180900 Sobic010G238700 Sobic010G238700 Sobic004G203100--Sobic010G238700 Sobic009G054700 Sobic009G054700 Sobic004G203100--Sobic009G054700 Sobic010G083700 Sobic010G083700 Sobic004G203100--Sobic010G083700 Sobic010G058900 Sobic010G058900 Sobic004G203100--Sobic010G058900 Sobic001G427800--Sobic001G478300 Sobic001G427800--Sobic001G149700 Sobic001G427800--Sobic010G071200 Sobic001G427800--Sobic003G273100 Sobic001G371300 Sobic001G371300 Sobic001G427800--Sobic001G371300 Sobic002G291300 Sobic002G291300 Sobic001G427800--Sobic002G291300 Sobic003G093900 Sobic003G093900 Sobic001G427800--Sobic003G093900 Sobic008G142700 Sobic008G142700 Sobic001G427800--Sobic008G142700 Sobic003G350600 Sobic003G350600 Sobic001G427800--Sobic003G350600 Sobic002G068300 Sobic002G068300 Sobic010G144400--Sobic002G068300 Sobic001G056700 Sobic001G056700 Sobic010G144400--Sobic001G056700 Sobic010G228600 Sobic010G228600 Sobic010G144400--Sobic010G228600 Sobic004G172700 Sobic004G172700 Sobic010G144400--Sobic004G172700 Sobic001G090000 Sobic001G090000 Sobic010G144400--Sobic001G090000 Sobic009G016201 Sobic009G016201 Sobic010G144400--Sobic009G016201 Sobic002G258100 Sobic002G258100 Sobic010G144400--Sobic002G258100 Sobic001G471900 Sobic001G471900 Sobic010G144400--Sobic001G471900 Sobic001G253600 Sobic001G253600 Sobic010G144400--Sobic001G253600 Sobic004G349000--Sobic010G071200 Sobic004G349000--Sobic001G478300 Sobic003G043100 Sobic003G043100 Sobic004G349000--Sobic003G043100 Sobic001G083600 Sobic001G083600 Sobic004G349000--Sobic001G083600 Sobic004G072800 Sobic004G072800 Sobic004G349000--Sobic004G072800 Sobic004G349000--Sobic010G055500 Sobic002G045400 Sobic002G045400 Sobic004G349000--Sobic002G045400 Sobic004G349000--Sobic009G036900 Sobic004G349000--Sobic004G231400 Sobic009G036900--Sobic002G068300 Sobic009G034400 Sobic009G034400 Sobic009G036900--Sobic009G034400 Sobic006G256500 Sobic006G256500 Sobic009G036900--Sobic006G256500 Sobic003G024800 Sobic003G024800 Sobic009G036900--Sobic003G024800 Sobic009G036900--Sobic010G228600 Sobic010G039800 Sobic010G039800 Sobic009G036900--Sobic010G039800 Sobic001G529000 Sobic001G529000 Sobic009G036900--Sobic001G529000 Sobic009G036900--Sobic010G071200 Sobic001G424500 Sobic001G424500 Sobic009G036900--Sobic001G424500 Sobic005G143400 Sobic005G143400 Sobic004G153200--Sobic005G143400 Sobic009G162200 Sobic009G162200 Sobic004G153200--Sobic009G162200 Sobic004G283000 Sobic004G283000 Sobic004G153200--Sobic004G283000 Sobic004G027100 Sobic004G027100 Sobic004G153200--Sobic004G027100 Sobic010G040800 Sobic010G040800 Sobic004G153200--Sobic010G040800 Sobic001G371000 Sobic001G371000 Sobic004G153200--Sobic001G371000 Sobic001G053800 Sobic001G053800 Sobic004G153200--Sobic001G053800 Sobic010G260500 Sobic010G260500 Sobic004G153200--Sobic010G260500 Sobic004G350100 Sobic004G350100 Sobic004G153200--Sobic004G350100
Octagon: transcription factors


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