Gene annotation
Transcriptome id Sobic.001G162000.1
Synonym PFD4, Sb01g014170, AIP3
Functional annotation prefoldin subunit, putative, expressed
UniProt C5WS57
Pfam PF01920
Panther DB PTHR21100 PTHR21100:SF9
NCBI CDD KOG1760; Molecular chaperone Prefoldin, subunit 4
KEGG Orthology K09550; prefoldin subunit 4
Gene Ontology GO:0016272; prefoldin complex GO:0006457protein folding


Orthologs (automatic annotation)
TAIR AT1G08780 : ABI3-interacting protein 3
RAP-DB (Rice) LOC_Os03g43020.1 : prefoldin subunit, putative, expressed
MaizeGDB (Corn) Zm00025a017286 , Zm00025a007356
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G162000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G107600 prefoldin subunit, putative, expressed K04798: pfdB, prefoldin beta subunit
2 Sobic.006G256500 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
3 Sobic.002G022400 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
4 Sobic.002G068300 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
5 Sobic.006G220700 signal recognition particle 14 kDa protein, putative, expressed K03104: signal recognition particle subunit SRP14
6 Sobic.001G331900 expressed protein -
7 Sobic.003G115800 miro, putative, expressed K07953: GTP-binding protein SAR1
8 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
9 Sobic.008G161000 protein kinase domain containing protein, expressed -
10 Sobic.010G095600 RING-H2 finger protein, putative, expressed -
11 Sobic.010G047400 "HGW(Ortholog in rice:Li et al., 2012)"(PubMedID : 31659929)@proline-rich cell wall protein-like, putative, expressed -
12 Sobic.001G389400 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
13 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta
14 Sobic.001G335400 protein of unknown function DUF1675 domain containing protein, expressed -
15 Sobic.005G157200 prefoldin subunit, putative, expressed K09549: prefoldin subunit 2
16 Sobic.010G106200 signal recognition particle 9 kDa protein, putative, expressed K03109: signal recognition particle subunit SRP9
17 Sobic.009G036900 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
18 Sobic.010G237000 coiled-coil domain-containing protein 72, putative, expressed -
19 Sobic.003G362400 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
20 Sobic.005G092800 expressed protein -


Gene co-expression network
sample Sobic001G162000 Sobic001G162000 Sobic004G107600 Sobic004G107600 Sobic001G162000--Sobic004G107600 Sobic006G256500 Sobic006G256500 Sobic001G162000--Sobic006G256500 Sobic002G022400 Sobic002G022400 Sobic001G162000--Sobic002G022400 Sobic002G068300 Sobic002G068300 Sobic001G162000--Sobic002G068300 Sobic006G220700 Sobic006G220700 Sobic001G162000--Sobic006G220700 Sobic001G331900 Sobic001G331900 Sobic001G162000--Sobic001G331900 Sobic003G115800 Sobic003G115800 Sobic001G162000--Sobic003G115800 Sobic003G249800 Sobic003G249800 Sobic001G162000--Sobic003G249800 Sobic008G161000 Sobic008G161000 Sobic001G162000--Sobic008G161000 Sobic004G107600--Sobic001G331900 Sobic003G362400 Sobic003G362400 Sobic004G107600--Sobic003G362400 Sobic001G377800 Sobic001G377800 Sobic004G107600--Sobic001G377800 Sobic010G182600 Sobic010G182600 Sobic004G107600--Sobic010G182600 Sobic005G092800 Sobic005G092800 Sobic004G107600--Sobic005G092800 Sobic005G157200 Sobic005G157200 Sobic004G107600--Sobic005G157200 Sobic002G078400 Sobic002G078400 Sobic004G107600--Sobic002G078400 Sobic003G321700 Sobic003G321700 Sobic004G107600--Sobic003G321700 Sobic001G445800 Sobic001G445800 Sobic004G107600--Sobic001G445800 Sobic009G036900 Sobic009G036900 Sobic006G256500--Sobic009G036900 Sobic006G256500--Sobic002G068300 Sobic004G248800 Sobic004G248800 Sobic006G256500--Sobic004G248800 Sobic007G163700 Sobic007G163700 Sobic006G256500--Sobic007G163700 Sobic001G529000 Sobic001G529000 Sobic006G256500--Sobic001G529000 Sobic010G039800 Sobic010G039800 Sobic006G256500--Sobic010G039800 Sobic009G016201 Sobic009G016201 Sobic006G256500--Sobic009G016201 Sobic006G256500--Sobic001G162000 Sobic010G243200 Sobic010G243200 Sobic006G256500--Sobic010G243200 Sobic002G022400--Sobic003G249800 Sobic002G330000 Sobic002G330000 Sobic002G022400--Sobic002G330000 Sobic002G022400--Sobic008G161000 Sobic002G022400--Sobic005G092800 Sobic002G022400--Sobic003G321700 Sobic004G152700 Sobic004G152700 Sobic002G022400--Sobic004G152700 Sobic010G204600 Sobic010G204600 Sobic002G022400--Sobic010G204600 Sobic001G422900 Sobic001G422900 Sobic002G022400--Sobic001G422900 Sobic002G022400--Sobic005G157200 Sobic002G068300--Sobic009G036900 Sobic010G228600 Sobic010G228600 Sobic002G068300--Sobic010G228600 Sobic002G068300--Sobic009G016201 Sobic002G068300--Sobic006G256500 Sobic010G144400 Sobic010G144400 Sobic002G068300--Sobic010G144400 Sobic002G068300--Sobic003G249800 Sobic002G282400 Sobic002G282400 Sobic002G068300--Sobic002G282400 Sobic001G389400 Sobic001G389400 Sobic002G068300--Sobic001G389400 Sobic002G205300 Sobic002G205300 Sobic002G068300--Sobic002G205300 Sobic010G153100 Sobic010G153100 Sobic006G220700--Sobic010G153100 Sobic006G220700--Sobic001G331900 Sobic006G220700--Sobic003G362400 Sobic008G132800 Sobic008G132800 Sobic006G220700--Sobic008G132800 Sobic006G220700--Sobic004G107600 Sobic006G220700--Sobic005G157200 Sobic006G220700--Sobic002G078400 Sobic006G220700--Sobic001G529000 Sobic002G116200 Sobic002G116200 Sobic006G220700--Sobic002G116200 Sobic001G331900--Sobic004G107600 Sobic001G331900--Sobic005G157200 Sobic008G058300 Sobic008G058300 Sobic001G331900--Sobic008G058300 Sobic001G331900--Sobic002G078400 Sobic001G331900--Sobic008G132800 Sobic004G300900 Sobic004G300900 Sobic001G331900--Sobic004G300900 Sobic001G331900--Sobic001G377800 Sobic001G331900--Sobic003G362400 Sobic001G331900--Sobic001G529000 Sobic007G186300 Sobic007G186300 Sobic003G115800--Sobic007G186300 Sobic003G115800--Sobic004G300900 Sobic003G220600 Sobic003G220600 Sobic003G115800--Sobic003G220600 Sobic003G115800--Sobic002G078400 Sobic010G204300 Sobic010G204300 Sobic003G115800--Sobic010G204300 Sobic001G054200 Sobic001G054200 Sobic003G115800--Sobic001G054200 Sobic002G202300 Sobic002G202300 Sobic003G115800--Sobic002G202300 Sobic004G079100 Sobic004G079100 Sobic003G115800--Sobic004G079100 Sobic004G293700 Sobic004G293700 Sobic003G115800--Sobic004G293700 Sobic003G249800--Sobic008G161000 Sobic001G037000 Sobic001G037000 Sobic003G249800--Sobic001G037000 Sobic009G033700 Sobic009G033700 Sobic003G249800--Sobic009G033700 Sobic002G046100 Sobic002G046100 Sobic003G249800--Sobic002G046100 Sobic003G249800--Sobic002G282400 Sobic003G249800--Sobic002G330000 Sobic009G143400 Sobic009G143400 Sobic003G249800--Sobic009G143400 Sobic002G211900 Sobic002G211900 Sobic003G249800--Sobic002G211900 Sobic003G181500 Sobic003G181500 Sobic003G249800--Sobic003G181500 Sobic008G161000--Sobic003G249800 Sobic008G161000--Sobic009G033700 Sobic009G152200 Sobic009G152200 Sobic008G161000--Sobic009G152200 Sobic008G161000--Sobic001G037000 Sobic009G129000 Sobic009G129000 Sobic008G161000--Sobic009G129000 Sobic008G161000--Sobic009G016201 Sobic008G161000--Sobic010G204300 Sobic008G161000--Sobic010G204600 Sobic010G213400 Sobic010G213400 Sobic008G161000--Sobic010G213400
Octagon: transcription factors


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