Gene annotation
Transcriptome id Sobic.004G153200.1
Synonym Sb04g020490
Functional annotation ZOS2-07 - C2H2 zinc finger protein, expressed
UniProt C5XSJ7
Pfam PF00627 PF09409
Panther DB PTHR13020 PTHR13020:SF34
NCBI CDD KOG2699; Predicted ubiquitin regulatory protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G04850 : ubiquitin-associated (UBA)/TS-N domain-containing protein
RAP-DB (Rice) LOC_Os02g30180.1 : ZOS2-07 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a031384
Brachypodium KQJ99561 , KQJ99560 , KQJ99562
Barley HORVU6Hr1G016460.9 , HORVU6Hr1G016460.8 , HORVU6Hr1G016460.5 , HORVU6Hr1G016460.4 , HORVU6Hr1G016460.7 , HORVU6Hr1G016460.6 , HORVU6Hr1G016460.1 , HORVU6Hr1G016460.3 , HORVU6Hr1G016460.2 , HORVU6Hr1G016460.10
Wheat TraesCS6B02G119800 , TraesCS6A02G091500 , TraesCS6D02G080400
Populus PNS95414 , PNS95415 , PNS95416 , PNT57708 , PNT57707 , PNT57706


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cDNA sequences
Sobic.004G153200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G143400 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
2 Sobic.009G162200 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
3 Sobic.004G283000 nucleic acid binding protein, putative, expressed -
4 Sobic.004G027100 ADP-ribosylation factor, putative, expressed K07977: Arf/Sar family, other
5 Sobic.010G040800 RNA recognition motif containing protein, putative, expressed -
6 Sobic.001G371000 GTPase of unknown function domain containing protein, putative, expressed K14537: NUG2, nuclear GTP-binding protein
7 Sobic.001G053800 expressed protein -
8 Sobic.010G260500 pre-mRNA-splicing factor syf2, putative, expressed K12868: pre-mRNA-splicing factor SYF2
9 Sobic.004G350100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
10 Sobic.002G411300 expressed protein -
11 Sobic.003G012500 expressed protein -
12 Sobic.007G111100 PSF3 - Putative GINS complex subunit, expressed K10734: GINS complex subunit 3
13 Sobic.003G115100 importin subunit alpha, putative, expressed -
14 Sobic.008G174300 GTPase of unknown function domain containing protein, putative, expressed K14539: large subunit GTPase 1
15 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
16 Sobic.004G026100 tRNA methyltransferase, putative, expressed K03439: trmB, METTL1, tRNA (guanine-N7-)-methyltransferase
17 Sobic.010G264400 CAMK_CAMK_like.30 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
18 Sobic.009G216000 mov34 family protein, putative, expressed K11864: BRCC3, BRCA1/BRCA2-containing complex subunit 3
19 Sobic.003G366500 transport protein particle component, Bet3, domain containing protein, expressed -
20 Sobic.009G257800 sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter


Gene co-expression network
sample Sobic004G153200 Sobic004G153200 Sobic005G143400 Sobic005G143400 Sobic004G153200--Sobic005G143400 Sobic009G162200 Sobic009G162200 Sobic004G153200--Sobic009G162200 Sobic004G283000 Sobic004G283000 Sobic004G153200--Sobic004G283000 Sobic004G027100 Sobic004G027100 Sobic004G153200--Sobic004G027100 Sobic010G040800 Sobic010G040800 Sobic004G153200--Sobic010G040800 Sobic001G371000 Sobic001G371000 Sobic004G153200--Sobic001G371000 Sobic001G053800 Sobic001G053800 Sobic004G153200--Sobic001G053800 Sobic010G260500 Sobic010G260500 Sobic004G153200--Sobic010G260500 Sobic004G350100 Sobic004G350100 Sobic004G153200--Sobic004G350100 Sobic009G056800 Sobic009G056800 Sobic005G143400--Sobic009G056800 Sobic007G118200 Sobic007G118200 Sobic005G143400--Sobic007G118200 Sobic001G466700 Sobic001G466700 Sobic005G143400--Sobic001G466700 Sobic008G174300 Sobic008G174300 Sobic005G143400--Sobic008G174300 Sobic002G388200 Sobic002G388200 Sobic005G143400--Sobic002G388200 Sobic005G143400--Sobic004G350100 Sobic007G119200 Sobic007G119200 Sobic005G143400--Sobic007G119200 Sobic005G143400--Sobic010G040800 Sobic003G081000 Sobic003G081000 Sobic005G143400--Sobic003G081000 Sobic009G162200--Sobic004G153200 Sobic009G162200--Sobic004G027100 Sobic004G048000 Sobic004G048000 Sobic009G162200--Sobic004G048000 Sobic003G012500 Sobic003G012500 Sobic009G162200--Sobic003G012500 Sobic004G061900 Sobic004G061900 Sobic009G162200--Sobic004G061900 Sobic005G033300 Sobic005G033300 Sobic009G162200--Sobic005G033300 Sobic005G207100 Sobic005G207100 Sobic009G162200--Sobic005G207100 Sobic004G026100 Sobic004G026100 Sobic009G162200--Sobic004G026100 Sobic003G115100 Sobic003G115100 Sobic009G162200--Sobic003G115100 Sobic003G248500 Sobic003G248500 Sobic004G283000--Sobic003G248500 Sobic004G283000--Sobic002G388200 Sobic004G007300 Sobic004G007300 Sobic004G283000--Sobic004G007300 Sobic004G283000--Sobic004G350100 Sobic004G283000--Sobic008G174300 Sobic004G283000--Sobic007G118200 Sobic009G257800 Sobic009G257800 Sobic004G283000--Sobic009G257800 Sobic006G173100 Sobic006G173100 Sobic004G283000--Sobic006G173100 Sobic002G157300 Sobic002G157300 Sobic004G283000--Sobic002G157300 Sobic004G027100--Sobic004G061900 Sobic004G088400 Sobic004G088400 Sobic004G027100--Sobic004G088400 Sobic004G027100--Sobic010G260500 Sobic001G235000 Sobic001G235000 Sobic004G027100--Sobic001G235000 Sobic004G027100--Sobic002G157300 Sobic002G177400 Sobic002G177400 Sobic004G027100--Sobic002G177400 Sobic007G008800 Sobic007G008800 Sobic004G027100--Sobic007G008800 Sobic009G040700 Sobic009G040700 Sobic004G027100--Sobic009G040700 Sobic008G117200 Sobic008G117200 Sobic004G027100--Sobic008G117200 Sobic010G040800--Sobic007G119200 Sobic001G517500 Sobic001G517500 Sobic010G040800--Sobic001G517500 Sobic010G040800--Sobic008G174300 Sobic010G040800--Sobic005G143400 Sobic002G197100 Sobic002G197100 Sobic010G040800--Sobic002G197100 Sobic004G257400 Sobic004G257400 Sobic010G040800--Sobic004G257400 Sobic001G408700 Sobic001G408700 Sobic010G040800--Sobic001G408700 Sobic007G185900 Sobic007G185900 Sobic010G040800--Sobic007G185900 Sobic003G205501 Sobic003G205501 Sobic010G040800--Sobic003G205501 Sobic002G362300 Sobic002G362300 Sobic001G371000--Sobic002G362300 Sobic005G009200 Sobic005G009200 Sobic001G371000--Sobic005G009200 Sobic001G371000--Sobic004G026100 Sobic003G239900 Sobic003G239900 Sobic001G371000--Sobic003G239900 Sobic009G216000 Sobic009G216000 Sobic001G371000--Sobic009G216000 Sobic009G151200 Sobic009G151200 Sobic001G371000--Sobic009G151200 Sobic009G022100 Sobic009G022100 Sobic001G371000--Sobic009G022100 Sobic003G442000 Sobic003G442000 Sobic001G371000--Sobic003G442000 Sobic001G371000--Sobic008G117200 Sobic010G028300 Sobic010G028300 Sobic001G053800--Sobic010G028300 Sobic002G180000 Sobic002G180000 Sobic001G053800--Sobic002G180000 Sobic007G132400 Sobic007G132400 Sobic001G053800--Sobic007G132400 Sobic002G126500 Sobic002G126500 Sobic001G053800--Sobic002G126500 Sobic001G119300 Sobic001G119300 Sobic001G053800--Sobic001G119300 Sobic007G111100 Sobic007G111100 Sobic001G053800--Sobic007G111100 Sobic001G053800--Sobic003G012500 Sobic003G241200 Sobic003G241200 Sobic001G053800--Sobic003G241200 Sobic003G401100 Sobic003G401100 Sobic001G053800--Sobic003G401100 Sobic010G260500--Sobic002G157300 Sobic010G260500--Sobic008G174300 Sobic007G078000 Sobic007G078000 Sobic010G260500--Sobic007G078000 Sobic010G260500--Sobic007G185900 Sobic010G033400 Sobic010G033400 Sobic010G260500--Sobic010G033400 Sobic001G451000 Sobic001G451000 Sobic010G260500--Sobic001G451000 Sobic004G263900 Sobic004G263900 Sobic010G260500--Sobic004G263900 Sobic005G149500 Sobic005G149500 Sobic010G260500--Sobic005G149500 Sobic003G187400 Sobic003G187400 Sobic010G260500--Sobic003G187400 Sobic004G350100--Sobic007G118200 Sobic004G350100--Sobic010G033400 Sobic006G252700 Sobic006G252700 Sobic004G350100--Sobic006G252700 Sobic004G350100--Sobic003G081000 Sobic004G350100--Sobic004G007300 Sobic004G350100--Sobic009G056800 Sobic004G350100--Sobic004G283000 Sobic001G143500 Sobic001G143500 Sobic004G350100--Sobic001G143500 Sobic001G028400 Sobic001G028400 Sobic004G350100--Sobic001G028400
Octagon: transcription factors


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