Gene annotation
Transcriptome id Sobic.009G162200.1
Synonym Sb09g022450
Functional annotation peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
UniProt C5YZ86
Pfam PF00254
Panther DB PTHR10516 PTHR10516:SF326
NCBI CDD KOG0544; FKBP-type peptidyl-prolyl cis-trans isomerase
KEGG Orthology K01802; peptidylprolyl isomerase
Gene Ontology GO:0006457; protein folding


Orthologs (automatic annotation)
TAIR AT3G55520 : FKBP-like peptidyl-prolyl cis-trans isomerase family protein
RAP-DB (Rice) LOC_Os05g38370.1 : peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
MaizeGDB (Corn) Zm00025a043895
Brachypodium -
Barley -
Wheat TraesCS1D02G282500
Populus -


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cDNA sequences
Sobic.009G162200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G153200 ZOS2-07 - C2H2 zinc finger protein, expressed -
2 Sobic.004G027100 ADP-ribosylation factor, putative, expressed K07977: Arf/Sar family, other
3 Sobic.004G048000 DUF292 domain containing protein, expressed -
4 Sobic.003G012500 expressed protein -
5 Sobic.004G061900 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed K19347: SUN domain-containing protein 1/2
6 Sobic.005G033300 microfibrillar-associated protein 1, putative, expressed K13110: microfibrillar-associated protein 1
7 Sobic.005G207100 dnaJ domain containing protein, expressed -
8 Sobic.004G026100 tRNA methyltransferase, putative, expressed K03439: trmB, METTL1, tRNA (guanine-N7-)-methyltransferase
9 Sobic.003G115100 importin subunit alpha, putative, expressed -
10 Sobic.003G086700 expressed protein -
11 Sobic.001G053800 expressed protein -
12 Sobic.009G030300 RNA polymerase II-associated protein 3, putative, expressed -
13 Sobic.007G195400 FHA domain containing protein, putative, expressed -
14 Sobic.008G129700 PAPA-1-like conserved region family protein, expressed K11666: INO80B, ZNHIT4, INO80 complex subunit B
15 Sobic.004G088400 GTPase-activating protein, putative, expressed -
16 Sobic.009G184700 zinc finger C3HC4 type family protein, putative, expressed K10695: E3 ubiquitin-protein ligase RNF1/2
17 Sobic.008G078100 EDM2, putative, expressed -
18 Sobic.005G143400 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
19 Sobic.001G352600 expressed protein -
20 Sobic.010G189000 protein with a conserved N-terminal region, putative, expressed -


Gene co-expression network
sample Sobic009G162200 Sobic009G162200 Sobic004G153200 Sobic004G153200 Sobic009G162200--Sobic004G153200 Sobic004G027100 Sobic004G027100 Sobic009G162200--Sobic004G027100 Sobic004G048000 Sobic004G048000 Sobic009G162200--Sobic004G048000 Sobic003G012500 Sobic003G012500 Sobic009G162200--Sobic003G012500 Sobic004G061900 Sobic004G061900 Sobic009G162200--Sobic004G061900 Sobic005G033300 Sobic005G033300 Sobic009G162200--Sobic005G033300 Sobic005G207100 Sobic005G207100 Sobic009G162200--Sobic005G207100 Sobic004G026100 Sobic004G026100 Sobic009G162200--Sobic004G026100 Sobic003G115100 Sobic003G115100 Sobic009G162200--Sobic003G115100 Sobic005G143400 Sobic005G143400 Sobic004G153200--Sobic005G143400 Sobic004G153200--Sobic009G162200 Sobic004G283000 Sobic004G283000 Sobic004G153200--Sobic004G283000 Sobic004G153200--Sobic004G027100 Sobic010G040800 Sobic010G040800 Sobic004G153200--Sobic010G040800 Sobic001G371000 Sobic001G371000 Sobic004G153200--Sobic001G371000 Sobic001G053800 Sobic001G053800 Sobic004G153200--Sobic001G053800 Sobic010G260500 Sobic010G260500 Sobic004G153200--Sobic010G260500 Sobic004G350100 Sobic004G350100 Sobic004G153200--Sobic004G350100 Sobic004G027100--Sobic004G061900 Sobic004G088400 Sobic004G088400 Sobic004G027100--Sobic004G088400 Sobic004G027100--Sobic010G260500 Sobic001G235000 Sobic001G235000 Sobic004G027100--Sobic001G235000 Sobic002G157300 Sobic002G157300 Sobic004G027100--Sobic002G157300 Sobic002G177400 Sobic002G177400 Sobic004G027100--Sobic002G177400 Sobic007G008800 Sobic007G008800 Sobic004G027100--Sobic007G008800 Sobic009G040700 Sobic009G040700 Sobic004G027100--Sobic009G040700 Sobic008G117200 Sobic008G117200 Sobic004G027100--Sobic008G117200 Sobic004G048000--Sobic002G177400 Sobic004G048000--Sobic004G088400 Sobic009G030300 Sobic009G030300 Sobic004G048000--Sobic009G030300 Sobic006G028200 Sobic006G028200 Sobic004G048000--Sobic006G028200 Sobic004G048000--Sobic004G027100 Sobic004G048000--Sobic008G117200 Sobic003G336800 Sobic003G336800 Sobic004G048000--Sobic003G336800 Sobic004G012000 Sobic004G012000 Sobic004G048000--Sobic004G012000 Sobic004G048000--Sobic004G061900 Sobic010G026400 Sobic010G026400 Sobic003G012500--Sobic010G026400 Sobic003G012500--Sobic002G157300 Sobic003G187400 Sobic003G187400 Sobic003G012500--Sobic003G187400 Sobic003G012500--Sobic010G260500 Sobic003G261300 Sobic003G261300 Sobic003G012500--Sobic003G261300 Sobic005G149500 Sobic005G149500 Sobic003G012500--Sobic005G149500 Sobic001G446900 Sobic001G446900 Sobic003G012500--Sobic001G446900 Sobic003G220200 Sobic003G220200 Sobic003G012500--Sobic003G220200 Sobic006G173100 Sobic006G173100 Sobic003G012500--Sobic006G173100 Sobic007G191100 Sobic007G191100 Sobic004G061900--Sobic007G191100 Sobic008G129700 Sobic008G129700 Sobic004G061900--Sobic008G129700 Sobic006G129700 Sobic006G129700 Sobic004G061900--Sobic006G129700 Sobic004G061900--Sobic008G117200 Sobic004G061900--Sobic009G030300 Sobic004G345700 Sobic004G345700 Sobic004G061900--Sobic004G345700 Sobic004G061900--Sobic002G177400 Sobic001G094000 Sobic001G094000 Sobic004G061900--Sobic001G094000 Sobic004G061900--Sobic004G027100 Sobic005G033300--Sobic001G053800 Sobic005G196900 Sobic005G196900 Sobic005G033300--Sobic005G196900 Sobic007G222800 Sobic007G222800 Sobic005G033300--Sobic007G222800 Sobic007G216900 Sobic007G216900 Sobic005G033300--Sobic007G216900 Sobic002G180000 Sobic002G180000 Sobic005G033300--Sobic002G180000 Sobic002G224700 Sobic002G224700 Sobic005G033300--Sobic002G224700 Sobic005G033300--Sobic004G153200 Sobic004G264300 Sobic004G264300 Sobic005G033300--Sobic004G264300 Sobic005G033300--Sobic009G162200 Sobic003G185200 Sobic003G185200 Sobic005G207100--Sobic003G185200 Sobic005G207100--Sobic004G027100 Sobic005G207100--Sobic010G026400 Sobic002G076400 Sobic002G076400 Sobic005G207100--Sobic002G076400 Sobic005G207100--Sobic003G012500 Sobic005G207100--Sobic007G191100 Sobic005G207100--Sobic007G008800 Sobic001G296500 Sobic001G296500 Sobic005G207100--Sobic001G296500 Sobic005G207100--Sobic003G336800 Sobic004G026100--Sobic001G371000 Sobic005G154700 Sobic005G154700 Sobic004G026100--Sobic005G154700 Sobic003G248500 Sobic003G248500 Sobic004G026100--Sobic003G248500 Sobic004G026100--Sobic009G030300 Sobic005G009200 Sobic005G009200 Sobic004G026100--Sobic005G009200 Sobic002G421700 Sobic002G421700 Sobic004G026100--Sobic002G421700 Sobic009G040800 Sobic009G040800 Sobic004G026100--Sobic009G040800 Sobic004G026100--Sobic008G117200 Sobic004G197900 Sobic004G197900 Sobic004G026100--Sobic004G197900 Sobic001G226000 Sobic001G226000 Sobic003G115100--Sobic001G226000 Sobic009G151200 Sobic009G151200 Sobic003G115100--Sobic009G151200 Sobic001G010600 Sobic001G010600 Sobic003G115100--Sobic001G010600 Sobic003G115100--Sobic009G030300 Sobic007G195400 Sobic007G195400 Sobic003G115100--Sobic007G195400 Sobic004G013600 Sobic004G013600 Sobic003G115100--Sobic004G013600 Sobic005G216300 Sobic005G216300 Sobic003G115100--Sobic005G216300 Sobic002G058300 Sobic002G058300 Sobic003G115100--Sobic002G058300 Sobic004G011000 Sobic004G011000 Sobic003G115100--Sobic004G011000
Octagon: transcription factors


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