Gene annotation
Transcriptome id Sobic.009G216000.1
Synonym Sb09g027130
Functional annotation mov34 family protein, putative, expressed
UniProt C5YUW2
Pfam PF01398
Panther DB PTHR10410 PTHR10410:SF2
NCBI CDD KOG1555; 26S proteasome regulatory complex, subunit RPN11
KEGG Orthology K11864; BRCC3, BRCA1/BRCA2-containing complex subunit 3
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G80210 : Mov34/MPN/PAD-1 family protein
RAP-DB (Rice) LOC_Os05g46490.2 : mov34 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a025908 , Zm00025a044422 , Zm00025a036484
Brachypodium KQK05111
Barley HORVU1Hr1G079200.1 , HORVU1Hr1G079200.3 , HORVU1Hr1G079200.2 , HORVU1Hr1G079200.5 , HORVU1Hr1G079200.4 , HORVU1Hr1G079200.7 , HORVU1Hr1G079200.6 , HORVU1Hr1G079200.9 , HORVU1Hr1G079200.8
Wheat TraesCS1D02G370000 , TraesCS1B02G382000 , TraesCS1A02G364600
Populus -


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cDNA sequences
Sobic.009G216000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1
2 Sobic.003G355000 Transcription initiation factor TFIID subunit A containing protein, expressed K03126: transcription initiation factor TFIID subunit 12
3 Sobic.002G045400 MBTB13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
4 Sobic.005G030300 protein kinase PKN/PRK1, effector, putative, expressed -
5 Sobic.001G371000 GTPase of unknown function domain containing protein, putative, expressed K14537: NUG2, nuclear GTP-binding protein
6 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5
7 Sobic.009G198100 expressed protein -
8 Sobic.002G362300 prefoldin, putative, expressed -
9 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
10 Sobic.008G174300 GTPase of unknown function domain containing protein, putative, expressed K14539: large subunit GTPase 1
11 Sobic.007G117100 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
12 Sobic.003G354100 expressed protein -
13 Sobic.006G248500 expressed protein -
14 Sobic.002G090800 expressed protein -
15 Sobic.001G083600 26S proteasome non-ATPase regulatory subunit 10, putative, expressed K06694: 26S proteasome non-ATPase regulatory subunit 10
16 Sobic.001G056200 expressed protein -
17 Sobic.001G469800 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB
18 Sobic.010G211300 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G
19 Sobic.003G146900 lipase class 3 family protein, putative, expressed -
20 Sobic.003G081000 transcription factor, putative, expressed K14431: transcription factor TGA


Gene co-expression network
sample Sobic009G216000 Sobic009G216000 Sobic003G433500 Sobic003G433500 Sobic009G216000--Sobic003G433500 Sobic003G355000 Sobic003G355000 Sobic009G216000--Sobic003G355000 Sobic002G045400 Sobic002G045400 Sobic009G216000--Sobic002G045400 Sobic005G030300 Sobic005G030300 Sobic009G216000--Sobic005G030300 Sobic001G371000 Sobic001G371000 Sobic009G216000--Sobic001G371000 Sobic004G013600 Sobic004G013600 Sobic009G216000--Sobic004G013600 Sobic009G198100 Sobic009G198100 Sobic009G216000--Sobic009G198100 Sobic002G362300 Sobic002G362300 Sobic009G216000--Sobic002G362300 Sobic006G261100 Sobic006G261100 Sobic009G216000--Sobic006G261100 Sobic009G195200 Sobic009G195200 Sobic003G433500--Sobic009G195200 Sobic003G433500--Sobic003G355000 Sobic003G433500--Sobic002G045400 Sobic003G433500--Sobic009G216000 Sobic003G354100 Sobic003G354100 Sobic003G433500--Sobic003G354100 Sobic006G267300 Sobic006G267300 Sobic003G433500--Sobic006G267300 Sobic006G248500 Sobic006G248500 Sobic003G433500--Sobic006G248500 Sobic003G433500--Sobic002G362300 Sobic002G259800 Sobic002G259800 Sobic003G433500--Sobic002G259800 Sobic003G355000--Sobic009G198100 Sobic002G034600 Sobic002G034600 Sobic003G355000--Sobic002G034600 Sobic003G355000--Sobic002G045400 Sobic003G355000--Sobic003G433500 Sobic008G174300 Sobic008G174300 Sobic003G355000--Sobic008G174300 Sobic001G517500 Sobic001G517500 Sobic003G355000--Sobic001G517500 Sobic007G118200 Sobic007G118200 Sobic003G355000--Sobic007G118200 Sobic010G033400 Sobic010G033400 Sobic003G355000--Sobic010G033400 Sobic001G497900 Sobic001G497900 Sobic003G355000--Sobic001G497900 Sobic008G073000 Sobic008G073000 Sobic002G045400--Sobic008G073000 Sobic002G045400--Sobic003G355000 Sobic002G045400--Sobic003G433500 Sobic002G045400--Sobic008G174300 Sobic008G101800 Sobic008G101800 Sobic002G045400--Sobic008G101800 Sobic002G045400--Sobic009G198100 Sobic002G045400--Sobic009G216000 Sobic010G202600 Sobic010G202600 Sobic002G045400--Sobic010G202600 Sobic002G045400--Sobic005G030300 Sobic005G030300--Sobic008G073000 Sobic008G165100 Sobic008G165100 Sobic005G030300--Sobic008G165100 Sobic002G095700 Sobic002G095700 Sobic005G030300--Sobic002G095700 Sobic005G030300--Sobic003G433500 Sobic005G030300--Sobic002G045400 Sobic006G278200 Sobic006G278200 Sobic005G030300--Sobic006G278200 Sobic005G030300--Sobic008G101800 Sobic005G030300--Sobic002G362300 Sobic009G022100 Sobic009G022100 Sobic005G030300--Sobic009G022100 Sobic001G371000--Sobic002G362300 Sobic005G009200 Sobic005G009200 Sobic001G371000--Sobic005G009200 Sobic004G026100 Sobic004G026100 Sobic001G371000--Sobic004G026100 Sobic003G239900 Sobic003G239900 Sobic001G371000--Sobic003G239900 Sobic001G371000--Sobic009G216000 Sobic009G151200 Sobic009G151200 Sobic001G371000--Sobic009G151200 Sobic001G371000--Sobic009G022100 Sobic003G442000 Sobic003G442000 Sobic001G371000--Sobic003G442000 Sobic008G117200 Sobic008G117200 Sobic001G371000--Sobic008G117200 Sobic001G056200 Sobic001G056200 Sobic004G013600--Sobic001G056200 Sobic001G028400 Sobic001G028400 Sobic004G013600--Sobic001G028400 Sobic004G013600--Sobic003G354100 Sobic010G211300 Sobic010G211300 Sobic004G013600--Sobic010G211300 Sobic004G013600--Sobic006G248500 Sobic007G205000 Sobic007G205000 Sobic004G013600--Sobic007G205000 Sobic009G030300 Sobic009G030300 Sobic004G013600--Sobic009G030300 Sobic003G437500 Sobic003G437500 Sobic004G013600--Sobic003G437500 Sobic004G013600--Sobic007G118200 Sobic009G198100--Sobic007G118200 Sobic009G198100--Sobic002G034600 Sobic009G198100--Sobic010G033400 Sobic009G198100--Sobic003G355000 Sobic003G081000 Sobic003G081000 Sobic009G198100--Sobic003G081000 Sobic009G198100--Sobic008G174300 Sobic001G131800 Sobic001G131800 Sobic009G198100--Sobic001G131800 Sobic003G359300 Sobic003G359300 Sobic009G198100--Sobic003G359300 Sobic009G198100--Sobic007G205000 Sobic002G362300--Sobic005G009200 Sobic002G362300--Sobic001G371000 Sobic002G362300--Sobic003G433500 Sobic005G229000 Sobic005G229000 Sobic002G362300--Sobic005G229000 Sobic002G362300--Sobic008G073000 Sobic002G362300--Sobic009G030300 Sobic002G362300--Sobic002G095700 Sobic002G362300--Sobic005G030300 Sobic009G044900 Sobic009G044900 Sobic002G362300--Sobic009G044900 Sobic001G038100 Sobic001G038100 Sobic006G261100--Sobic001G038100 Sobic010G095700 Sobic010G095700 Sobic006G261100--Sobic010G095700 Sobic002G276900 Sobic002G276900 Sobic006G261100--Sobic002G276900 Sobic007G117100 Sobic007G117100 Sobic006G261100--Sobic007G117100 Sobic006G261100--Sobic009G022100 Sobic006G120800 Sobic006G120800 Sobic006G261100--Sobic006G120800 Sobic001G390500 Sobic001G390500 Sobic006G261100--Sobic001G390500 Sobic006G261100--Sobic009G216000 Sobic006G261100--Sobic003G354100
Octagon: transcription factors


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