Gene annotation
Transcriptome id Sobic.005G030300.2
Synonym Sb05g002570
Functional annotation protein kinase PKN/PRK1, effector, putative, expressed
UniProt C5Y4G9
Pfam -
Panther DB PTHR33405 PTHR33405:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55170 : -
RAP-DB (Rice) LOC_Os08g33330.1 : protein kinase PKN/PRK1, effector, putative, expressed
MaizeGDB (Corn) Zm00025a033443 , Zm00025a013075 , Zm00025a010987
Brachypodium -
Barley HORVU1Hr1G058340.4 , HORVU1Hr1G058340.1 , HORVU1Hr1G058340.3 , HORVU1Hr1G058340.2
Wheat TraesCS3A02G524600 , TraesCS3B02G593200 , TraesCS3B02G591900 , TraesCS3A02G526000 , TraesCS1D02G234100 , TraesCS1D02G234100 , TraesCS3D02G529800 , TraesCS1B02G246000 , TraesCS1B02G180300 , TraesCS3D02G531200 , TraesCS3D02G531200
Populus -


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cDNA sequences
Sobic.005G030300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G073000 expressed protein -
2 Sobic.008G165100 G-patch domain containing protein, putative, expressed K13103: tuftelin-interacting protein 11
3 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
4 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1
5 Sobic.002G045400 MBTB13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
6 Sobic.006G278200 RNA-binding region RNP-1, putative, expressed -
7 Sobic.008G101800 expressed protein -
8 Sobic.002G362300 prefoldin, putative, expressed -
9 Sobic.009G022100 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
10 Sobic.001G202266 - -
11 Sobic.009G216000 mov34 family protein, putative, expressed K11864: BRCC3, BRCA1/BRCA2-containing complex subunit 3
12 Sobic.002G067800 - -
13 Sobic.010G174800 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
14 Sobic.001G083600 26S proteasome non-ATPase regulatory subunit 10, putative, expressed K06694: 26S proteasome non-ATPase regulatory subunit 10
15 Sobic.003G355000 Transcription initiation factor TFIID subunit A containing protein, expressed K03126: transcription initiation factor TFIID subunit 12
16 Sobic.008G129700 PAPA-1-like conserved region family protein, expressed K11666: INO80B, ZNHIT4, INO80 complex subunit B
17 Sobic.001G390500 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
18 Sobic.010G202600 zinc finger, C3HC4 type domain containing protein, expressed K10661: MARCH6, E3 ubiquitin-protein ligase MARCH6
19 Sobic.002G018600 OsFBX234 - F-box domain containing protein, expressed -
20 Sobic.003G336800 expressed protein -


Gene co-expression network
sample Sobic005G030300 Sobic005G030300 Sobic008G073000 Sobic008G073000 Sobic005G030300--Sobic008G073000 Sobic008G165100 Sobic008G165100 Sobic005G030300--Sobic008G165100 Sobic002G095700 Sobic002G095700 Sobic005G030300--Sobic002G095700 Sobic003G433500 Sobic003G433500 Sobic005G030300--Sobic003G433500 Sobic002G045400 Sobic002G045400 Sobic005G030300--Sobic002G045400 Sobic006G278200 Sobic006G278200 Sobic005G030300--Sobic006G278200 Sobic008G101800 Sobic008G101800 Sobic005G030300--Sobic008G101800 Sobic002G362300 Sobic002G362300 Sobic005G030300--Sobic002G362300 Sobic009G022100 Sobic009G022100 Sobic005G030300--Sobic009G022100 Sobic008G073000--Sobic005G030300 Sobic008G073000--Sobic002G045400 Sobic008G073000--Sobic002G095700 Sobic008G073000--Sobic008G101800 Sobic001G202266 Sobic001G202266 Sobic008G073000--Sobic001G202266 Sobic008G073000--Sobic006G278200 Sobic008G073000--Sobic008G165100 Sobic010G174800 Sobic010G174800 Sobic008G073000--Sobic010G174800 Sobic002G067800 Sobic002G067800 Sobic008G073000--Sobic002G067800 Sobic008G165100--Sobic002G067800 Sobic010G194700 Sobic010G194700 Sobic008G165100--Sobic010G194700 Sobic008G165100--Sobic008G073000 Sobic008G165100--Sobic005G030300 Sobic008G165100--Sobic002G095700 Sobic006G123900 Sobic006G123900 Sobic008G165100--Sobic006G123900 Sobic002G151600 Sobic002G151600 Sobic008G165100--Sobic002G151600 Sobic008G165100--Sobic003G433500 Sobic008G165100--Sobic002G045400 Sobic002G095700--Sobic006G278200 Sobic002G095700--Sobic008G073000 Sobic002G095700--Sobic005G030300 Sobic002G095700--Sobic008G165100 Sobic002G095700--Sobic002G067800 Sobic002G095700--Sobic003G433500 Sobic002G089900 Sobic002G089900 Sobic002G095700--Sobic002G089900 Sobic002G095700--Sobic009G022100 Sobic004G078100 Sobic004G078100 Sobic002G095700--Sobic004G078100 Sobic009G195200 Sobic009G195200 Sobic003G433500--Sobic009G195200 Sobic003G355000 Sobic003G355000 Sobic003G433500--Sobic003G355000 Sobic003G433500--Sobic002G045400 Sobic009G216000 Sobic009G216000 Sobic003G433500--Sobic009G216000 Sobic003G354100 Sobic003G354100 Sobic003G433500--Sobic003G354100 Sobic006G267300 Sobic006G267300 Sobic003G433500--Sobic006G267300 Sobic006G248500 Sobic006G248500 Sobic003G433500--Sobic006G248500 Sobic003G433500--Sobic002G362300 Sobic002G259800 Sobic002G259800 Sobic003G433500--Sobic002G259800 Sobic002G045400--Sobic008G073000 Sobic002G045400--Sobic003G355000 Sobic002G045400--Sobic003G433500 Sobic008G174300 Sobic008G174300 Sobic002G045400--Sobic008G174300 Sobic002G045400--Sobic008G101800 Sobic009G198100 Sobic009G198100 Sobic002G045400--Sobic009G198100 Sobic002G045400--Sobic009G216000 Sobic010G202600 Sobic010G202600 Sobic002G045400--Sobic010G202600 Sobic002G045400--Sobic005G030300 Sobic006G278200--Sobic002G095700 Sobic006G278200--Sobic008G073000 Sobic005G072400 Sobic005G072400 Sobic006G278200--Sobic005G072400 Sobic006G278200--Sobic005G030300 Sobic006G278200--Sobic001G202266 Sobic002G341100 Sobic002G341100 Sobic006G278200--Sobic002G341100 Sobic009G137900 Sobic009G137900 Sobic006G278200--Sobic009G137900 Sobic006G278200--Sobic002G089900 Sobic006G278200--Sobic002G067800 Sobic002G001600 Sobic002G001600 Sobic008G101800--Sobic002G001600 Sobic008G101800--Sobic008G073000 Sobic001G222300 Sobic001G222300 Sobic008G101800--Sobic001G222300 Sobic001G206100 Sobic001G206100 Sobic008G101800--Sobic001G206100 Sobic005G162600 Sobic005G162600 Sobic008G101800--Sobic005G162600 Sobic008G116500 Sobic008G116500 Sobic008G101800--Sobic008G116500 Sobic004G332300 Sobic004G332300 Sobic008G101800--Sobic004G332300 Sobic007G185900 Sobic007G185900 Sobic008G101800--Sobic007G185900 Sobic008G101800--Sobic002G045400 Sobic005G009200 Sobic005G009200 Sobic002G362300--Sobic005G009200 Sobic001G371000 Sobic001G371000 Sobic002G362300--Sobic001G371000 Sobic002G362300--Sobic003G433500 Sobic005G229000 Sobic005G229000 Sobic002G362300--Sobic005G229000 Sobic002G362300--Sobic008G073000 Sobic009G030300 Sobic009G030300 Sobic002G362300--Sobic009G030300 Sobic002G362300--Sobic002G095700 Sobic002G362300--Sobic005G030300 Sobic009G044900 Sobic009G044900 Sobic002G362300--Sobic009G044900 Sobic009G022100--Sobic002G095700 Sobic009G022100--Sobic003G433500 Sobic009G022100--Sobic005G030300 Sobic009G192500 Sobic009G192500 Sobic009G022100--Sobic009G192500 Sobic009G022100--Sobic008G073000 Sobic006G261100 Sobic006G261100 Sobic009G022100--Sobic006G261100 Sobic001G469800 Sobic001G469800 Sobic009G022100--Sobic001G469800 Sobic009G022100--Sobic002G362300 Sobic009G022100--Sobic001G371000
Octagon: transcription factors


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