Gene annotation
Transcriptome id Sobic.005G122900.1
Synonym
Functional annotation -
UniProt A0A1B6PRZ1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G072800 expressed protein -
2 Sobic.010G251100 - K03257: translation initiation factor 4A
3 Sobic.003G043100 ribosome biogenesis regulatory protein, putative, expressed K14852: regulator of ribosome biosynthesis
4 Sobic.001G429400 wibg, putative, expressed K14294: WIBG, partner of Y14 and mago
5 Sobic.010G173000 expressed protein -
6 Sobic.006G258900 expressed protein -
7 Sobic.003G350600 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
8 Sobic.004G332000 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, putative, expressed K00736: alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
9 Sobic.003G051200 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed K18159: NDUFAF1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1
10 Sobic.008G020200 UDP-N-acetylglucosamine transferase subunit ALG14, putative, expressed K07441: beta-1,4-N-acetylglucosaminyltransferase
11 Sobic.001G043900 ORC2 - Putative origin recognition complex subunit 2, expressed K02604: origin recognition complex subunit 2
12 Sobic.004G349000 deoxyhypusine hydroxylase, putative, expressed K06072: deoxyhypusine monooxygenase
13 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
14 Sobic.004G011000 expressed protein K11883: RNA-binding protein NOB1
15 Sobic.003G045400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7
16 Sobic.010G247400 Brix domain containing protein, putative, expressed K14561: U3 small nucleolar ribonucleoprotein protein IMP4
17 Sobic.003G214300 expressed protein -
18 Sobic.001G427800 tyrosine protein kinase domain containing protein, putative, expressed -
19 Sobic.002G189700 nucleobase-ascorbate transporter, putative, expressed -
20 Sobic.001G226000 WD domain, G-beta repeat domain containing protein, expressed K10599: PRPF19, pre-mRNA-processing factor 19


Gene co-expression network
sample Sobic005G122900 Sobic005G122900 Sobic004G072800 Sobic004G072800 Sobic005G122900--Sobic004G072800 Sobic010G251100 Sobic010G251100 Sobic005G122900--Sobic010G251100 Sobic003G043100 Sobic003G043100 Sobic005G122900--Sobic003G043100 Sobic001G429400 Sobic001G429400 Sobic005G122900--Sobic001G429400 Sobic010G173000 Sobic010G173000 Sobic005G122900--Sobic010G173000 Sobic006G258900 Sobic006G258900 Sobic005G122900--Sobic006G258900 Sobic003G350600 Sobic003G350600 Sobic005G122900--Sobic003G350600 Sobic004G332000 Sobic004G332000 Sobic005G122900--Sobic004G332000 Sobic003G051200 Sobic003G051200 Sobic005G122900--Sobic003G051200 Sobic001G067900 Sobic001G067900 Sobic004G072800--Sobic001G067900 Sobic004G072800--Sobic003G350600 Sobic003G007500 Sobic003G007500 Sobic004G072800--Sobic003G007500 Sobic002G313500 Sobic002G313500 Sobic004G072800--Sobic002G313500 Sobic007G118000 Sobic007G118000 Sobic004G072800--Sobic007G118000 Sobic001G522900 Sobic001G522900 Sobic004G072800--Sobic001G522900 Sobic002G281300 Sobic002G281300 Sobic004G072800--Sobic002G281300 Sobic004G072800--Sobic001G429400 Sobic003G045400 Sobic003G045400 Sobic004G072800--Sobic003G045400 Sobic001G226100 Sobic001G226100 Sobic010G251100--Sobic001G226100 Sobic001G402300 Sobic001G402300 Sobic010G251100--Sobic001G402300 Sobic003G226500 Sobic003G226500 Sobic010G251100--Sobic003G226500 Sobic009G232400 Sobic009G232400 Sobic010G251100--Sobic009G232400 Sobic007G205000 Sobic007G205000 Sobic010G251100--Sobic007G205000 Sobic008G004400 Sobic008G004400 Sobic010G251100--Sobic008G004400 Sobic006G278700 Sobic006G278700 Sobic010G251100--Sobic006G278700 Sobic010G012600 Sobic010G012600 Sobic010G251100--Sobic010G012600 Sobic010G193800 Sobic010G193800 Sobic010G251100--Sobic010G193800 Sobic001G428400 Sobic001G428400 Sobic003G043100--Sobic001G428400 Sobic009G178600 Sobic009G178600 Sobic003G043100--Sobic009G178600 Sobic006G242300 Sobic006G242300 Sobic003G043100--Sobic006G242300 Sobic004G077000 Sobic004G077000 Sobic003G043100--Sobic004G077000 Sobic003G043100--Sobic001G429400 Sobic001G083600 Sobic001G083600 Sobic003G043100--Sobic001G083600 Sobic003G043100--Sobic004G072800 Sobic004G006300 Sobic004G006300 Sobic003G043100--Sobic004G006300 Sobic001G390500 Sobic001G390500 Sobic003G043100--Sobic001G390500 Sobic001G429400--Sobic004G072800 Sobic003G024800 Sobic003G024800 Sobic001G429400--Sobic003G024800 Sobic010G211300 Sobic010G211300 Sobic001G429400--Sobic010G211300 Sobic001G429400--Sobic003G045400 Sobic001G429400--Sobic003G043100 Sobic001G427800 Sobic001G427800 Sobic001G429400--Sobic001G427800 Sobic009G140700 Sobic009G140700 Sobic001G429400--Sobic009G140700 Sobic002G272600 Sobic002G272600 Sobic001G429400--Sobic002G272600 Sobic004G263900 Sobic004G263900 Sobic001G429400--Sobic004G263900 Sobic010G173000--Sobic005G122900 Sobic003G311200 Sobic003G311200 Sobic010G173000--Sobic003G311200 Sobic005G014950 Sobic005G014950 Sobic010G173000--Sobic005G014950 Sobic001G043900 Sobic001G043900 Sobic010G173000--Sobic001G043900 Sobic010G144000 Sobic010G144000 Sobic010G173000--Sobic010G144000 Sobic005G047800 Sobic005G047800 Sobic010G173000--Sobic005G047800 Sobic010G064500 Sobic010G064500 Sobic010G173000--Sobic010G064500 Sobic008G126200 Sobic008G126200 Sobic010G173000--Sobic008G126200 Sobic002G270300 Sobic002G270300 Sobic010G173000--Sobic002G270300 Sobic007G115900 Sobic007G115900 Sobic006G258900--Sobic007G115900 Sobic004G007300 Sobic004G007300 Sobic006G258900--Sobic004G007300 Sobic006G258900--Sobic001G522900 Sobic004G350100 Sobic004G350100 Sobic006G258900--Sobic004G350100 Sobic006G258900--Sobic007G205000 Sobic006G258900--Sobic001G043900 Sobic009G194801 Sobic009G194801 Sobic006G258900--Sobic009G194801 Sobic006G258900--Sobic001G390500 Sobic001G056200 Sobic001G056200 Sobic006G258900--Sobic001G056200 Sobic003G350600--Sobic004G072800 Sobic001G512600 Sobic001G512600 Sobic003G350600--Sobic001G512600 Sobic003G350600--Sobic003G007500 Sobic008G142700 Sobic008G142700 Sobic003G350600--Sobic008G142700 Sobic003G350600--Sobic003G226500 Sobic003G350600--Sobic001G427800 Sobic003G350600--Sobic009G232400 Sobic001G061700 Sobic001G061700 Sobic003G350600--Sobic001G061700 Sobic003G350600--Sobic001G067900 Sobic002G119800 Sobic002G119800 Sobic004G332000--Sobic002G119800 Sobic006G213601 Sobic006G213601 Sobic004G332000--Sobic006G213601 Sobic001G262900 Sobic001G262900 Sobic004G332000--Sobic001G262900 Sobic001G072200 Sobic001G072200 Sobic004G332000--Sobic001G072200 Sobic003G374500 Sobic003G374500 Sobic004G332000--Sobic003G374500 Sobic006G255100 Sobic006G255100 Sobic004G332000--Sobic006G255100 Sobic004G152601 Sobic004G152601 Sobic004G332000--Sobic004G152601 Sobic007G136700 Sobic007G136700 Sobic004G332000--Sobic007G136700 Sobic002G067100 Sobic002G067100 Sobic004G332000--Sobic002G067100 Sobic003G248500 Sobic003G248500 Sobic003G051200--Sobic003G248500 Sobic004G283000 Sobic004G283000 Sobic003G051200--Sobic004G283000 Sobic003G051200--Sobic001G390500 Sobic002G378200 Sobic002G378200 Sobic003G051200--Sobic002G378200 Sobic007G111100 Sobic007G111100 Sobic003G051200--Sobic007G111100 Sobic002G365100 Sobic002G365100 Sobic003G051200--Sobic002G365100 Sobic002G388200 Sobic002G388200 Sobic003G051200--Sobic002G388200 Sobic003G051200--Sobic001G083600 Sobic001G371200 Sobic001G371200 Sobic003G051200--Sobic001G371200
Octagon: transcription factors


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