Gene annotation
Transcriptome id Sobic.001G043900.1
Synonym ATORC2, Sb01g004040, ORC2
Functional annotation ORC2 - Putative origin recognition complex subunit 2, expressed
UniProt C5WW25
Pfam PF04084
Panther DB PTHR14052 PTHR14052:SF0
NCBI CDD -
KEGG Orthology K02604; origin recognition complex subunit 2
Gene Ontology GO:0006260; DNA replication GO:0005634nucleus GO:0000808origin recognition complex


Orthologs (automatic annotation)
TAIR AT2G37560 : origin recognition complex second largest subunit 2
RAP-DB (Rice) LOC_Os03g08640.1 : ORC2 - Putative origin recognition complex subunit 2, expressed
MaizeGDB (Corn) Zm00025a020932
Brachypodium KQK23263
Barley -
Wheat TraesCS4A02G003800 , TraesCS4D02G299900 , TraesCS4B02G301600
Populus -


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cDNA sequences
Sobic.001G043900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G115900 SAM domain family protein, expressed -
2 Sobic.009G225200 expressed protein -
3 Sobic.006G258900 expressed protein -
4 Sobic.005G014950 - -
5 Sobic.003G417900 cullin-1, putative, expressed -
6 Sobic.001G428400 - K12826: SF3A2, splicing factor 3A subunit 2
7 Sobic.009G117300 protein kinase APK1B, chloroplast precursor, putative, expressed -
8 Sobic.009G015800 expressed protein -
9 Sobic.002G197100 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
10 Sobic.001G522900 expressed protein -
11 Sobic.004G348100 DNL zinc finger domain containing protein, putative, expressed K17808: ZIM17, DNLZ, mitochondrial protein import protein ZIM17
12 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
13 Sobic.004G007300 expressed protein -
14 Sobic.004G350100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
15 Sobic.009G178600 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
16 Sobic.009G194801 - -
17 Sobic.010G251100 - K03257: translation initiation factor 4A
18 Sobic.009G117400 protein kinase domain containing protein, expressed -
19 Sobic.004G283000 nucleic acid binding protein, putative, expressed -
20 Sobic.004G271900 RMD5 homolog A, putative, expressed -


Gene co-expression network
sample Sobic001G043900 Sobic001G043900 Sobic007G115900 Sobic007G115900 Sobic001G043900--Sobic007G115900 Sobic009G225200 Sobic009G225200 Sobic001G043900--Sobic009G225200 Sobic006G258900 Sobic006G258900 Sobic001G043900--Sobic006G258900 Sobic005G014950 Sobic005G014950 Sobic001G043900--Sobic005G014950 Sobic003G417900 Sobic003G417900 Sobic001G043900--Sobic003G417900 Sobic001G428400 Sobic001G428400 Sobic001G043900--Sobic001G428400 Sobic009G117300 Sobic009G117300 Sobic001G043900--Sobic009G117300 Sobic009G015800 Sobic009G015800 Sobic001G043900--Sobic009G015800 Sobic002G197100 Sobic002G197100 Sobic001G043900--Sobic002G197100 Sobic004G316800 Sobic004G316800 Sobic007G115900--Sobic004G316800 Sobic001G522900 Sobic001G522900 Sobic007G115900--Sobic001G522900 Sobic006G092800 Sobic006G092800 Sobic007G115900--Sobic006G092800 Sobic007G115900--Sobic001G043900 Sobic009G032300 Sobic009G032300 Sobic007G115900--Sobic009G032300 Sobic007G115900--Sobic006G258900 Sobic002G378200 Sobic002G378200 Sobic007G115900--Sobic002G378200 Sobic004G007300 Sobic004G007300 Sobic007G115900--Sobic004G007300 Sobic003G211700 Sobic003G211700 Sobic007G115900--Sobic003G211700 Sobic009G225200--Sobic009G117300 Sobic009G117400 Sobic009G117400 Sobic009G225200--Sobic009G117400 Sobic005G015100 Sobic005G015100 Sobic009G225200--Sobic005G015100 Sobic009G225200--Sobic001G043900 Sobic003G258900 Sobic003G258900 Sobic009G225200--Sobic003G258900 Sobic004G271900 Sobic004G271900 Sobic009G225200--Sobic004G271900 Sobic004G348100 Sobic004G348100 Sobic009G225200--Sobic004G348100 Sobic003G442000 Sobic003G442000 Sobic009G225200--Sobic003G442000 Sobic009G225200--Sobic009G015800 Sobic006G258900--Sobic007G115900 Sobic006G258900--Sobic004G007300 Sobic006G258900--Sobic001G522900 Sobic004G350100 Sobic004G350100 Sobic006G258900--Sobic004G350100 Sobic007G205000 Sobic007G205000 Sobic006G258900--Sobic007G205000 Sobic006G258900--Sobic001G043900 Sobic009G194801 Sobic009G194801 Sobic006G258900--Sobic009G194801 Sobic001G390500 Sobic001G390500 Sobic006G258900--Sobic001G390500 Sobic001G056200 Sobic001G056200 Sobic006G258900--Sobic001G056200 Sobic005G014950--Sobic001G043900 Sobic001G221100 Sobic001G221100 Sobic005G014950--Sobic001G221100 Sobic005G014950--Sobic001G428400 Sobic010G042900 Sobic010G042900 Sobic005G014950--Sobic010G042900 Sobic003G079750 Sobic003G079750 Sobic005G014950--Sobic003G079750 Sobic008G126200 Sobic008G126200 Sobic005G014950--Sobic008G126200 Sobic001G039700 Sobic001G039700 Sobic005G014950--Sobic001G039700 Sobic004G034400 Sobic004G034400 Sobic005G014950--Sobic004G034400 Sobic005G014950--Sobic007G115900 Sobic003G417900--Sobic002G197100 Sobic003G417900--Sobic001G390500 Sobic001G408700 Sobic001G408700 Sobic003G417900--Sobic001G408700 Sobic003G354100 Sobic003G354100 Sobic003G417900--Sobic003G354100 Sobic004G013600 Sobic004G013600 Sobic003G417900--Sobic004G013600 Sobic001G425000 Sobic001G425000 Sobic003G417900--Sobic001G425000 Sobic003G417900--Sobic006G092800 Sobic003G189900 Sobic003G189900 Sobic003G417900--Sobic003G189900 Sobic008G073000 Sobic008G073000 Sobic003G417900--Sobic008G073000 Sobic004G077000 Sobic004G077000 Sobic001G428400--Sobic004G077000 Sobic001G428400--Sobic009G117300 Sobic004G211400 Sobic004G211400 Sobic001G428400--Sobic004G211400 Sobic001G428400--Sobic001G039700 Sobic004G006300 Sobic004G006300 Sobic001G428400--Sobic004G006300 Sobic008G034600 Sobic008G034600 Sobic001G428400--Sobic008G034600 Sobic003G043100 Sobic003G043100 Sobic001G428400--Sobic003G043100 Sobic001G428400--Sobic009G117400 Sobic008G136000 Sobic008G136000 Sobic001G428400--Sobic008G136000 Sobic009G117300--Sobic009G117400 Sobic009G117300--Sobic004G271900 Sobic009G117300--Sobic009G225200 Sobic010G263800 Sobic010G263800 Sobic009G117300--Sobic010G263800 Sobic004G057400 Sobic004G057400 Sobic009G117300--Sobic004G057400 Sobic009G117300--Sobic008G034600 Sobic006G209500 Sobic006G209500 Sobic009G117300--Sobic006G209500 Sobic004G256600 Sobic004G256600 Sobic009G117300--Sobic004G256600 Sobic007G205800 Sobic007G205800 Sobic009G117300--Sobic007G205800 Sobic009G015800--Sobic005G015100 Sobic009G015800--Sobic009G225200 Sobic002G259800 Sobic002G259800 Sobic009G015800--Sobic002G259800 Sobic002G158700 Sobic002G158700 Sobic009G015800--Sobic002G158700 Sobic002G421700 Sobic002G421700 Sobic009G015800--Sobic002G421700 Sobic001G087100 Sobic001G087100 Sobic009G015800--Sobic001G087100 Sobic004G232000 Sobic004G232000 Sobic009G015800--Sobic004G232000 Sobic005G015900 Sobic005G015900 Sobic009G015800--Sobic005G015900 Sobic001G315100 Sobic001G315100 Sobic009G015800--Sobic001G315100 Sobic002G197100--Sobic004G007300 Sobic006G173100 Sobic006G173100 Sobic002G197100--Sobic006G173100 Sobic004G345700 Sobic004G345700 Sobic002G197100--Sobic004G345700 Sobic001G176200 Sobic001G176200 Sobic002G197100--Sobic001G176200 Sobic001G090400 Sobic001G090400 Sobic002G197100--Sobic001G090400 Sobic002G197100--Sobic001G425000 Sobic003G248500 Sobic003G248500 Sobic002G197100--Sobic003G248500 Sobic001G514000 Sobic001G514000 Sobic002G197100--Sobic001G514000 Sobic002G370900 Sobic002G370900 Sobic002G197100--Sobic002G370900
Octagon: transcription factors


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