Gene annotation
Transcriptome id Sobic.009G194801.1,Sobic.009G194801.2
Synonym -
Functional annotation -
UniProt A0A1Z5R3C7 , A0A1Z5R431
Pfam PF07904
Panther DB PTHR13581
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT1G26470 : -
RAP-DB (Rice) LOC_Os05g43680.1 : expressed protein
MaizeGDB (Corn) Zm00025a044206
Brachypodium PNT70934
Barley -
Wheat TraesCS1D02G335100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G258900 expressed protein -
2 Sobic.010G027600 transcription factor TFIIF, putative, expressed K11341: YEATS4, GAS41, YEATS domain-containing protein 4
3 Sobic.007G115900 SAM domain family protein, expressed -
4 Sobic.001G043900 ORC2 - Putative origin recognition complex subunit 2, expressed K02604: origin recognition complex subunit 2
5 Sobic.002G347000 WD domain, G-beta repeat domain containing protein, expressed K14963: WDR5, SWD3, COMPASS component SWD3
6 Sobic.003G417900 cullin-1, putative, expressed -
7 Sobic.002G306400 zinc finger family protein, putative, expressed -
8 Sobic.009G058500 phosphatidylinositolglycan-related, putative, expressed K03858: PIGH, phosphatidylinositol N-acetylglucosaminyltransferase subunit H
9 Sobic.003G178900 RNAse P Rpr2/Rpp21 subunit domain containing protein, expressed -
10 Sobic.004G348100 DNL zinc finger domain containing protein, putative, expressed K17808: ZIM17, DNLZ, mitochondrial protein import protein ZIM17
11 Sobic.004G141700 expressed protein -
12 Sobic.001G522900 expressed protein -
13 Sobic.007G053500 mps one binder kinase activator-like 1A, putative, expressed K06685: MOB1, MOB kinase activator 1
14 Sobic.009G083200 coiled-coil domain-containing protein 25, putative, expressed -
15 Sobic.007G105900 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed -
16 Sobic.003G439800 growth inhibition and differentiation-related protein 88, putative, expressed -
17 Sobic.007G189000 WTG1(Ortholog in rice:Wang et al. (2017))(PubMedID : 31659909)@ubiquitin thioesterase otubain-like, putative, expressed K09602: ubiquitin thioesterase protein OTUB1
18 Sobic.007G075900 SKP1, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
19 Sobic.003G071500 geranylgeranyl transferase type-1 subunit beta, putative, expressed K11713: geranylgeranyl transferase type-1 subunit beta
20 Sobic.010G203300 paxneb-related protein, putative, expressed K11375: elongator complex protein 4


Gene co-expression network
sample Sobic009G194801 Sobic009G194801 Sobic006G258900 Sobic006G258900 Sobic009G194801--Sobic006G258900 Sobic010G027600 Sobic010G027600 Sobic009G194801--Sobic010G027600 Sobic007G115900 Sobic007G115900 Sobic009G194801--Sobic007G115900 Sobic001G043900 Sobic001G043900 Sobic009G194801--Sobic001G043900 Sobic002G347000 Sobic002G347000 Sobic009G194801--Sobic002G347000 Sobic003G417900 Sobic003G417900 Sobic009G194801--Sobic003G417900 Sobic002G306400 Sobic002G306400 Sobic009G194801--Sobic002G306400 Sobic009G058500 Sobic009G058500 Sobic009G194801--Sobic009G058500 Sobic003G178900 Sobic003G178900 Sobic009G194801--Sobic003G178900 Sobic006G258900--Sobic007G115900 Sobic004G007300 Sobic004G007300 Sobic006G258900--Sobic004G007300 Sobic001G522900 Sobic001G522900 Sobic006G258900--Sobic001G522900 Sobic004G350100 Sobic004G350100 Sobic006G258900--Sobic004G350100 Sobic007G205000 Sobic007G205000 Sobic006G258900--Sobic007G205000 Sobic006G258900--Sobic001G043900 Sobic006G258900--Sobic009G194801 Sobic001G390500 Sobic001G390500 Sobic006G258900--Sobic001G390500 Sobic001G056200 Sobic001G056200 Sobic006G258900--Sobic001G056200 Sobic010G018700 Sobic010G018700 Sobic010G027600--Sobic010G018700 Sobic004G066200 Sobic004G066200 Sobic010G027600--Sobic004G066200 Sobic009G222500 Sobic009G222500 Sobic010G027600--Sobic009G222500 Sobic002G352600 Sobic002G352600 Sobic010G027600--Sobic002G352600 Sobic009G179700 Sobic009G179700 Sobic010G027600--Sobic009G179700 Sobic002G110700 Sobic002G110700 Sobic010G027600--Sobic002G110700 Sobic002G192200 Sobic002G192200 Sobic010G027600--Sobic002G192200 Sobic009G228700 Sobic009G228700 Sobic010G027600--Sobic009G228700 Sobic006G049700 Sobic006G049700 Sobic010G027600--Sobic006G049700 Sobic004G316800 Sobic004G316800 Sobic007G115900--Sobic004G316800 Sobic007G115900--Sobic001G522900 Sobic006G092800 Sobic006G092800 Sobic007G115900--Sobic006G092800 Sobic007G115900--Sobic001G043900 Sobic009G032300 Sobic009G032300 Sobic007G115900--Sobic009G032300 Sobic007G115900--Sobic006G258900 Sobic002G378200 Sobic002G378200 Sobic007G115900--Sobic002G378200 Sobic007G115900--Sobic004G007300 Sobic003G211700 Sobic003G211700 Sobic007G115900--Sobic003G211700 Sobic001G043900--Sobic007G115900 Sobic009G225200 Sobic009G225200 Sobic001G043900--Sobic009G225200 Sobic001G043900--Sobic006G258900 Sobic005G014950 Sobic005G014950 Sobic001G043900--Sobic005G014950 Sobic001G043900--Sobic003G417900 Sobic001G428400 Sobic001G428400 Sobic001G043900--Sobic001G428400 Sobic009G117300 Sobic009G117300 Sobic001G043900--Sobic009G117300 Sobic009G015800 Sobic009G015800 Sobic001G043900--Sobic009G015800 Sobic002G197100 Sobic002G197100 Sobic001G043900--Sobic002G197100 Sobic003G143200 Sobic003G143200 Sobic002G347000--Sobic003G143200 Sobic005G160400 Sobic005G160400 Sobic002G347000--Sobic005G160400 Sobic001G309400 Sobic001G309400 Sobic002G347000--Sobic001G309400 Sobic006G180000 Sobic006G180000 Sobic002G347000--Sobic006G180000 Sobic007G115200 Sobic007G115200 Sobic002G347000--Sobic007G115200 Sobic006G199200 Sobic006G199200 Sobic002G347000--Sobic006G199200 Sobic007G167900 Sobic007G167900 Sobic002G347000--Sobic007G167900 Sobic001G281600 Sobic001G281600 Sobic002G347000--Sobic001G281600 Sobic008G076800 Sobic008G076800 Sobic002G347000--Sobic008G076800 Sobic003G417900--Sobic002G197100 Sobic003G417900--Sobic001G390500 Sobic001G408700 Sobic001G408700 Sobic003G417900--Sobic001G408700 Sobic003G354100 Sobic003G354100 Sobic003G417900--Sobic003G354100 Sobic004G013600 Sobic004G013600 Sobic003G417900--Sobic004G013600 Sobic001G425000 Sobic001G425000 Sobic003G417900--Sobic001G425000 Sobic003G417900--Sobic006G092800 Sobic003G189900 Sobic003G189900 Sobic003G417900--Sobic003G189900 Sobic008G073000 Sobic008G073000 Sobic003G417900--Sobic008G073000 Sobic002G268400 Sobic002G268400 Sobic002G306400--Sobic002G268400 Sobic003G250500 Sobic003G250500 Sobic002G306400--Sobic003G250500 Sobic003G273400 Sobic003G273400 Sobic002G306400--Sobic003G273400 Sobic001G226100 Sobic001G226100 Sobic002G306400--Sobic001G226100 Sobic001G309100 Sobic001G309100 Sobic002G306400--Sobic001G309100 Sobic001G402300 Sobic001G402300 Sobic002G306400--Sobic001G402300 Sobic001G136900 Sobic001G136900 Sobic002G306400--Sobic001G136900 Sobic010G146600 Sobic010G146600 Sobic002G306400--Sobic010G146600 Sobic004G074300 Sobic004G074300 Sobic002G306400--Sobic004G074300 Sobic001G360200 Sobic001G360200 Sobic009G058500--Sobic001G360200 Sobic007G184500 Sobic007G184500 Sobic009G058500--Sobic007G184500 Sobic009G058500--Sobic010G018700 Sobic002G077900 Sobic002G077900 Sobic009G058500--Sobic002G077900 Sobic003G439800 Sobic003G439800 Sobic009G058500--Sobic003G439800 Sobic003G074400 Sobic003G074400 Sobic009G058500--Sobic003G074400 Sobic006G278700 Sobic006G278700 Sobic009G058500--Sobic006G278700 Sobic006G044600 Sobic006G044600 Sobic009G058500--Sobic006G044600 Sobic004G346100 Sobic004G346100 Sobic009G058500--Sobic004G346100 Sobic004G356900 Sobic004G356900 Sobic003G178900--Sobic004G356900 Sobic001G082100 Sobic001G082100 Sobic003G178900--Sobic001G082100 Sobic009G138700 Sobic009G138700 Sobic003G178900--Sobic009G138700 Sobic003G178900--Sobic006G044600 Sobic010G209000 Sobic010G209000 Sobic003G178900--Sobic010G209000 Sobic002G394600 Sobic002G394600 Sobic003G178900--Sobic002G394600 Sobic004G232800 Sobic004G232800 Sobic003G178900--Sobic004G232800 Sobic003G178900--Sobic001G360200 Sobic009G192000 Sobic009G192000 Sobic003G178900--Sobic009G192000
Octagon: transcription factors


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