Gene annotation
Transcriptome id Sobic.006G240800.1
Synonym Sb06g030680
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
myosin-Ie, putative, expressed
UniProt A0A1Z5RFD1
Pfam PF06017
Panther DB PTHR34969 PTHR34969:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016459; myosin complex GO:0003774motor activity


Orthologs (automatic annotation)
TAIR AT5G53310 : myosin heavy chain-related
RAP-DB (Rice) LOC_Os01g43360.1 : myosin-Ie, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK08786 , KQK08787
Barley HORVU3Hr1G055630.1 , HORVU3Hr1G055630.2 , HORVU3Hr1G055630.3
Wheat TraesCS3A02G224500 , TraesCS3D02G229100 , TraesCS3B02G254000
Populus -


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cDNA sequences
Sobic.006G240800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G140000 receptor-like protein kinase precursor, putative, expressed -
2 Sobic.002G258100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
3 Sobic.004G054300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
4 Sobic.002G263800 peptidase, T1 family, putative, expressed K02736: 20S proteasome subunit beta 7
5 Sobic.001G227500 expressed protein -
6 Sobic.009G088100 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.001G010400 snRK1-interacting protein 1, putative, expressed -
8 Sobic.004G335000 26S protease regulatory subunit 6A, putative, expressed K03065: PSMC3, 26S proteasome regulatory subunit T5
9 Sobic.002G202400 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
10 Sobic.008G107500 WRKY96, expressed -
11 Sobic.002G090200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytidine deaminase, putative, expressed -
12 Sobic.003G280900 NADP-malic enzyme(PubMedID : 26904072)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
13 Sobic.007G078100 UPF0041 domain containing protein, putative, expressed -
14 Sobic.002G296300 expressed protein -
15 Sobic.007G148800 cupin superfamily protein, putative, expressed K09705: uncharacterized protein
16 Sobic.007G142500 EF hand family protein, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
17 Sobic.006G165400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glutamate dehydrogenase protein, putative, expressed K00261: GLUD1_2, glutamate dehydrogenase (NAD(P)+)
18 Sobic.007G095400 expressed protein -
19 Sobic.008G161800 proteasome subunit, putative, expressed K03036: PSMD11, 26S proteasome regulatory subunit N6
20 Sobic.008G130400 prefoldin, putative, expressed -


Gene co-expression network
sample Sobic006G240800 Sobic006G240800 Sobic006G140000 Sobic006G140000 Sobic006G240800--Sobic006G140000 Sobic002G258100 Sobic002G258100 Sobic006G240800--Sobic002G258100 Sobic004G054300 Sobic004G054300 Sobic006G240800--Sobic004G054300 Sobic002G263800 Sobic002G263800 Sobic006G240800--Sobic002G263800 Sobic001G227500 Sobic001G227500 Sobic006G240800--Sobic001G227500 Sobic009G088100 Sobic009G088100 Sobic006G240800--Sobic009G088100 Sobic001G010400 Sobic001G010400 Sobic006G240800--Sobic001G010400 Sobic004G335000 Sobic004G335000 Sobic006G240800--Sobic004G335000 Sobic002G202400 Sobic002G202400 Sobic006G240800--Sobic002G202400 Sobic001G488500 Sobic001G488500 Sobic006G140000--Sobic001G488500 Sobic003G348400 Sobic003G348400 Sobic006G140000--Sobic003G348400 Sobic004G185900 Sobic004G185900 Sobic006G140000--Sobic004G185900 Sobic003G338400 Sobic003G338400 Sobic006G140000--Sobic003G338400 Sobic001G151800 Sobic001G151800 Sobic006G140000--Sobic001G151800 Sobic005G215900 Sobic005G215900 Sobic006G140000--Sobic005G215900 Sobic003G085300 Sobic003G085300 Sobic006G140000--Sobic003G085300 Sobic010G016400 Sobic010G016400 Sobic006G140000--Sobic010G016400 Sobic004G102400 Sobic004G102400 Sobic006G140000--Sobic004G102400 Sobic002G175500 Sobic002G175500 Sobic002G258100--Sobic002G175500 Sobic008G107500 Sobic008G107500 Sobic002G258100--Sobic008G107500 Sobic010G144400 Sobic010G144400 Sobic002G258100--Sobic010G144400 Sobic002G258100--Sobic001G010400 Sobic001G023200 Sobic001G023200 Sobic002G258100--Sobic001G023200 Sobic001G253600 Sobic001G253600 Sobic002G258100--Sobic001G253600 Sobic001G056700 Sobic001G056700 Sobic002G258100--Sobic001G056700 Sobic004G172700 Sobic004G172700 Sobic002G258100--Sobic004G172700 Sobic001G393800 Sobic001G393800 Sobic002G258100--Sobic001G393800 Sobic006G217700 Sobic006G217700 Sobic004G054300--Sobic006G217700 Sobic006G264300 Sobic006G264300 Sobic004G054300--Sobic006G264300 Sobic003G023500 Sobic003G023500 Sobic004G054300--Sobic003G023500 Sobic001G089500 Sobic001G089500 Sobic004G054300--Sobic001G089500 Sobic004G054300--Sobic004G185900 Sobic002G296300 Sobic002G296300 Sobic004G054300--Sobic002G296300 Sobic002G083266 Sobic002G083266 Sobic004G054300--Sobic002G083266 Sobic002G113800 Sobic002G113800 Sobic004G054300--Sobic002G113800 Sobic002G309400 Sobic002G309400 Sobic004G054300--Sobic002G309400 Sobic008G161800 Sobic008G161800 Sobic002G263800--Sobic008G161800 Sobic007G095400 Sobic007G095400 Sobic002G263800--Sobic007G095400 Sobic001G483100 Sobic001G483100 Sobic002G263800--Sobic001G483100 Sobic009G180000 Sobic009G180000 Sobic002G263800--Sobic009G180000 Sobic010G173100 Sobic010G173100 Sobic002G263800--Sobic010G173100 Sobic010G039800 Sobic010G039800 Sobic002G263800--Sobic010G039800 Sobic009G016201 Sobic009G016201 Sobic002G263800--Sobic009G016201 Sobic010G204500 Sobic010G204500 Sobic002G263800--Sobic010G204500 Sobic004G310300 Sobic004G310300 Sobic002G263800--Sobic004G310300 Sobic001G026900 Sobic001G026900 Sobic001G227500--Sobic001G026900 Sobic004G050000 Sobic004G050000 Sobic001G227500--Sobic004G050000 Sobic004G248800 Sobic004G248800 Sobic001G227500--Sobic004G248800 Sobic008G179500 Sobic008G179500 Sobic001G227500--Sobic008G179500 Sobic003G253000 Sobic003G253000 Sobic001G227500--Sobic003G253000 Sobic002G267500 Sobic002G267500 Sobic001G227500--Sobic002G267500 Sobic002G264400 Sobic002G264400 Sobic001G227500--Sobic002G264400 Sobic001G236300 Sobic001G236300 Sobic001G227500--Sobic001G236300 Sobic001G227500--Sobic002G083266 Sobic007G142500 Sobic007G142500 Sobic009G088100--Sobic007G142500 Sobic007G045600 Sobic007G045600 Sobic009G088100--Sobic007G045600 Sobic003G330500 Sobic003G330500 Sobic009G088100--Sobic003G330500 Sobic004G224900 Sobic004G224900 Sobic009G088100--Sobic004G224900 Sobic009G088100--Sobic001G236300 Sobic003G261400 Sobic003G261400 Sobic009G088100--Sobic003G261400 Sobic001G458700 Sobic001G458700 Sobic009G088100--Sobic001G458700 Sobic003G124800 Sobic003G124800 Sobic009G088100--Sobic003G124800 Sobic007G176200 Sobic007G176200 Sobic009G088100--Sobic007G176200 Sobic002G249000 Sobic002G249000 Sobic001G010400--Sobic002G249000 Sobic007G148800 Sobic007G148800 Sobic001G010400--Sobic007G148800 Sobic001G010400--Sobic004G185900 Sobic001G010400--Sobic002G113800 Sobic001G010400--Sobic001G393800 Sobic001G010400--Sobic002G258100 Sobic002G180600 Sobic002G180600 Sobic001G010400--Sobic002G180600 Sobic001G010400--Sobic008G107500 Sobic001G010400--Sobic010G016400 Sobic002G428200 Sobic002G428200 Sobic004G335000--Sobic002G428200 Sobic004G335000--Sobic007G176200 Sobic001G010700 Sobic001G010700 Sobic004G335000--Sobic001G010700 Sobic002G257400 Sobic002G257400 Sobic004G335000--Sobic002G257400 Sobic006G252200 Sobic006G252200 Sobic004G335000--Sobic006G252200 Sobic004G335000--Sobic001G236300 Sobic001G461900 Sobic001G461900 Sobic004G335000--Sobic001G461900 Sobic001G058100 Sobic001G058100 Sobic004G335000--Sobic001G058100 Sobic004G335000--Sobic007G045600 Sobic009G054700 Sobic009G054700 Sobic002G202400--Sobic009G054700 Sobic009G238800 Sobic009G238800 Sobic002G202400--Sobic009G238800 Sobic010G080200 Sobic010G080200 Sobic002G202400--Sobic010G080200 Sobic001G048700 Sobic001G048700 Sobic002G202400--Sobic001G048700 Sobic002G281300 Sobic002G281300 Sobic002G202400--Sobic002G281300 Sobic003G007500 Sobic003G007500 Sobic002G202400--Sobic003G007500 Sobic002G132300 Sobic002G132300 Sobic002G202400--Sobic002G132300 Sobic002G376300 Sobic002G376300 Sobic002G202400--Sobic002G376300 Sobic003G005200 Sobic003G005200 Sobic002G202400--Sobic003G005200
Octagon: transcription factors


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