Gene annotation
Transcriptome id Sobic.004G163300.3,Sobic.004G163300.5,Sobic.004G163300.2,Sobic.004G163300.1,Sobic.004G163300.4
Synonym AtCTR1, Sb04g021500, CTR1, SIS1
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A194YR70
Pfam PF14381 PF07714
Panther DB PTHR23257 PTHR23257:SF384
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology K14510; serine/threonine-protein kinase CTR1
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G03730 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os02g32610.3,LOC_Os02g32610.2 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a020522
Brachypodium KQJ91573 , KQJ99695 , KQJ99694 , KQJ99697 , KQJ99696 , KQJ99691 , KQJ99690 , KQJ99693 , KQJ99692 , KQJ99698 , PNT68745 , PNT68744 , PNT68743 , PNT68742 , PNT68741 , PNT68740 , PNT68738 , PNT68739 , KQJ99689
Barley HORVU4Hr1G001850.8 , HORVU4Hr1G001850.9 , HORVU4Hr1G001850.7 , HORVU4Hr1G001850.5 , HORVU4Hr1G001850.2 , HORVU4Hr1G001850.1 , HORVU4Hr1G001850.10 , HORVU4Hr1G001850.11
Wheat TraesCS4A02G302000 , TraesCS4D02G010200 , TraesCS4B02G012100
Populus -


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cDNA sequences
Sobic.004G163300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G114800 CDPK - calcium-dependent protein kinase 18(PubMedID : 31721651)@CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
2 Sobic.009G177400 leucine-rich repeat family protein, putative, expressed -
3 Sobic.004G354400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
4 Sobic.001G201500 - K12614: DDX6, RCK, ATP-dependent RNA helicase DDX6/DHH1
5 Sobic.010G242900 disease resistance protein RGA3, putative, expressed -
6 Sobic.003G313400 expressed protein -
7 Sobic.009G229300 glycosyltransferase family 43 protein, putative, expressed -
8 Sobic.002G306700 expressed protein -
9 Sobic.001G049200 AMP-binding enzyme, putative, expressed -
10 Sobic.001G540100 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
11 Sobic.002G333500 serine/threonine-protein kinase receptor precursor, putative, expressed -
12 Sobic.010G188400 copine-1, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
13 Sobic.004G134100 glycosyltransferase, putative, expressed -
14 Sobic.002G408800 protein kinase family protein, putative, expressed K08819: cyclin-dependent kinase 12/13
15 Sobic.010G274500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@catalase isozyme B, putative, expressed K03781: katE, CAT, catB, catalase
16 Sobic.010G017800 LMBR1 integral membrane protein, putative, expressed K14617: LMBR1 domain-containing protein 1
17 Sobic.007G203500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor, putative, expressed -
18 Sobic.001G359400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
19 Sobic.004G161900 AMP-binding enzyme, putative, expressed K01895: ACSS1_2, acetyl-CoA synthetase
20 Sobic.008G156300 kinase, pfkB family, putative, expressed K00868: pdxK, pyridoxine kinase


Gene co-expression network
sample Sobic004G163300 Sobic004G163300 Sobic002G114800 Sobic002G114800 Sobic004G163300--Sobic002G114800 Sobic009G177400 Sobic009G177400 Sobic004G163300--Sobic009G177400 Sobic004G354400 Sobic004G354400 Sobic004G163300--Sobic004G354400 Sobic001G201500 Sobic001G201500 Sobic004G163300--Sobic001G201500 Sobic010G242900 Sobic010G242900 Sobic004G163300--Sobic010G242900 Sobic003G313400 Sobic003G313400 Sobic004G163300--Sobic003G313400 Sobic009G229300 Sobic009G229300 Sobic004G163300--Sobic009G229300 Sobic002G306700 Sobic002G306700 Sobic004G163300--Sobic002G306700 Sobic001G049200 Sobic001G049200 Sobic004G163300--Sobic001G049200 Sobic002G114800--Sobic001G049200 Sobic002G114800--Sobic009G177400 Sobic001G328000 Sobic001G328000 Sobic002G114800--Sobic001G328000 Sobic002G114800--Sobic004G163300 Sobic004G173600 Sobic004G173600 Sobic002G114800--Sobic004G173600 Sobic009G102300 Sobic009G102300 Sobic002G114800--Sobic009G102300 Sobic002G114800--Sobic002G306700 Sobic005G134600 Sobic005G134600 Sobic002G114800--Sobic005G134600 Sobic001G540100 Sobic001G540100 Sobic002G114800--Sobic001G540100 Sobic009G177400--Sobic002G114800 Sobic008G144401 Sobic008G144401 Sobic009G177400--Sobic008G144401 Sobic002G258100 Sobic002G258100 Sobic009G177400--Sobic002G258100 Sobic008G107500 Sobic008G107500 Sobic009G177400--Sobic008G107500 Sobic003G354400 Sobic003G354400 Sobic009G177400--Sobic003G354400 Sobic010G274500 Sobic010G274500 Sobic009G177400--Sobic010G274500 Sobic002G175500 Sobic002G175500 Sobic009G177400--Sobic002G175500 Sobic009G177400--Sobic004G163300 Sobic007G098400 Sobic007G098400 Sobic009G177400--Sobic007G098400 Sobic004G354400--Sobic003G313400 Sobic004G295800 Sobic004G295800 Sobic004G354400--Sobic004G295800 Sobic010G250200 Sobic010G250200 Sobic004G354400--Sobic010G250200 Sobic001G359400 Sobic001G359400 Sobic004G354400--Sobic001G359400 Sobic010G078100 Sobic010G078100 Sobic004G354400--Sobic010G078100 Sobic010G188400 Sobic010G188400 Sobic004G354400--Sobic010G188400 Sobic008G191100 Sobic008G191100 Sobic004G354400--Sobic008G191100 Sobic003G179600 Sobic003G179600 Sobic004G354400--Sobic003G179600 Sobic004G354400--Sobic004G163300 Sobic001G201400 Sobic001G201400 Sobic001G201500--Sobic001G201400 Sobic006G056600 Sobic006G056600 Sobic001G201500--Sobic006G056600 Sobic010G002400 Sobic010G002400 Sobic001G201500--Sobic010G002400 Sobic002G313500 Sobic002G313500 Sobic001G201500--Sobic002G313500 Sobic005G155700 Sobic005G155700 Sobic001G201500--Sobic005G155700 Sobic009G075800 Sobic009G075800 Sobic001G201500--Sobic009G075800 Sobic003G012200 Sobic003G012200 Sobic001G201500--Sobic003G012200 Sobic003G287100 Sobic003G287100 Sobic001G201500--Sobic003G287100 Sobic001G033500 Sobic001G033500 Sobic001G201500--Sobic001G033500 Sobic001G215900 Sobic001G215900 Sobic010G242900--Sobic001G215900 Sobic004G134100 Sobic004G134100 Sobic010G242900--Sobic004G134100 Sobic002G168600 Sobic002G168600 Sobic010G242900--Sobic002G168600 Sobic009G013700 Sobic009G013700 Sobic010G242900--Sobic009G013700 Sobic010G138500 Sobic010G138500 Sobic010G242900--Sobic010G138500 Sobic001G366800 Sobic001G366800 Sobic010G242900--Sobic001G366800 Sobic006G130501 Sobic006G130501 Sobic010G242900--Sobic006G130501 Sobic004G247300 Sobic004G247300 Sobic010G242900--Sobic004G247300 Sobic006G098200 Sobic006G098200 Sobic010G242900--Sobic006G098200 Sobic004G358400 Sobic004G358400 Sobic003G313400--Sobic004G358400 Sobic007G203500 Sobic007G203500 Sobic003G313400--Sobic007G203500 Sobic004G002400 Sobic004G002400 Sobic003G313400--Sobic004G002400 Sobic003G331400 Sobic003G331400 Sobic003G313400--Sobic003G331400 Sobic003G313400--Sobic004G354400 Sobic004G002100 Sobic004G002100 Sobic003G313400--Sobic004G002100 Sobic009G229600 Sobic009G229600 Sobic003G313400--Sobic009G229600 Sobic005G026200 Sobic005G026200 Sobic003G313400--Sobic005G026200 Sobic006G245400 Sobic006G245400 Sobic003G313400--Sobic006G245400 Sobic008G003600 Sobic008G003600 Sobic009G229300--Sobic008G003600 Sobic001G512000 Sobic001G512000 Sobic009G229300--Sobic001G512000 Sobic001G230100 Sobic001G230100 Sobic009G229300--Sobic001G230100 Sobic003G052400 Sobic003G052400 Sobic009G229300--Sobic003G052400 Sobic010G105600 Sobic010G105600 Sobic009G229300--Sobic010G105600 Sobic001G237500 Sobic001G237500 Sobic009G229300--Sobic001G237500 Sobic002G131900 Sobic002G131900 Sobic009G229300--Sobic002G131900 Sobic004G337900 Sobic004G337900 Sobic009G229300--Sobic004G337900 Sobic002G362900 Sobic002G362900 Sobic009G229300--Sobic002G362900 Sobic004G079700 Sobic004G079700 Sobic002G306700--Sobic004G079700 Sobic002G306700--Sobic002G114800 Sobic003G432100 Sobic003G432100 Sobic002G306700--Sobic003G432100 Sobic002G408800 Sobic002G408800 Sobic002G306700--Sobic002G408800 Sobic008G156300 Sobic008G156300 Sobic002G306700--Sobic008G156300 Sobic007G120800 Sobic007G120800 Sobic002G306700--Sobic007G120800 Sobic006G243500 Sobic006G243500 Sobic002G306700--Sobic006G243500 Sobic002G306700--Sobic004G163300 Sobic005G075600 Sobic005G075600 Sobic002G306700--Sobic005G075600 Sobic009G179200 Sobic009G179200 Sobic001G049200--Sobic009G179200 Sobic001G049200--Sobic002G114800 Sobic010G161450 Sobic010G161450 Sobic001G049200--Sobic010G161450 Sobic002G242500 Sobic002G242500 Sobic001G049200--Sobic002G242500 Sobic007G221100 Sobic007G221100 Sobic001G049200--Sobic007G221100 Sobic002G294200 Sobic002G294200 Sobic001G049200--Sobic002G294200 Sobic004G132300 Sobic004G132300 Sobic001G049200--Sobic004G132300 Sobic006G176600 Sobic006G176600 Sobic001G049200--Sobic006G176600 Sobic001G049200--Sobic007G098400
Octagon: transcription factors


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