Gene annotation
Transcriptome id Sobic.008G156300.1,Sobic.008G156300.3,Sobic.008G156300.4,Sobic.008G156300.2
Synonym SOS4, Sb08g020510, ATSOS4
Functional annotation kinase, pfkB family, putative, expressed
UniProt A0A1B6PDX0 , A0A1B6PDW4
Pfam PF08543
Panther DB PTHR10534 PTHR10534:SF2
NCBI CDD KOG2599; Pyridoxal/pyridoxine/pyridoxamine kinase
KEGG Orthology K00868; pdxK, pyridoxine kinase
Gene Ontology GO:0009443; pyridoxal 5'-phosphate salvage GO:0008478pyridoxal kinase activity


Orthologs (automatic annotation)
TAIR AT5G37850 : pfkB-like carbohydrate kinase family protein
RAP-DB (Rice) LOC_Os12g40830.2,LOC_Os12g40830.3 : kinase, pfkB family, putative, expressed
MaizeGDB (Corn) Zm00025a025273
Brachypodium KQJ85966 , KQJ85967
Barley HORVU5Hr1G014350.2 , HORVU5Hr1G014350.3 , HORVU5Hr1G014350.1 , HORVU5Hr1G014350.6 , HORVU5Hr1G014350.4 , HORVU5Hr1G014350.5
Wheat TraesCS5A02G058100 , TraesCS5B02G065400 , TraesCS5D02G069700 , TraesCS5D02G069700
Populus -


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cDNA sequences
Sobic.008G156300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G120800 puromycin-sensitive aminopeptidase, putative, expressed K08776: puromycin-sensitive aminopeptidase
2 Sobic.006G203100 expressed protein -
3 Sobic.001G432300 imidazole glycerol phosphate synthase hisHF, chloroplast precursor, putative, expressed K01663: imidazole glycerol-phosphate synthase
4 Sobic.010G274500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@catalase isozyme B, putative, expressed K03781: katE, CAT, catB, catalase
5 Sobic.005G229166 - -
6 Sobic.010G050200 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
7 Sobic.002G114800 CDPK - calcium-dependent protein kinase 18(PubMedID : 31721651)@CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
8 Sobic.002G306700 expressed protein -
9 Sobic.001G540100 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
10 Sobic.001G145500 trafficking protein particle complex subunit 1, putative, expressed -
11 Sobic.003G130600 MazG nucleotide pyrophosphohydrolase domain containing protein, expressed K11755: phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase
12 Sobic.001G402600 expressed protein -
13 Sobic.010G212200 synthase, putative, expressed K02377: TSTA3, GDP-L-fucose synthase
14 Sobic.008G084600 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
15 Sobic.004G057800 URED, putative, expressed K03190: ureD, urease accessory protein
16 Sobic.006G179700 Ser/Thr-rich protein T10 in DGCR region, putative, expressed -
17 Sobic.001G289400 expressed protein -
18 Sobic.001G010700 proteasome subunit, putative, expressed K03035: PSMD12, 26S proteasome regulatory subunit N5
19 Sobic.010G008100 RNA recognition motif containing protein, putative, expressed -
20 Sobic.003G330500 peptidase, T1 family, putative, expressed -


Gene co-expression network
sample Sobic008G156300 Sobic008G156300 Sobic007G120800 Sobic007G120800 Sobic008G156300--Sobic007G120800 Sobic006G203100 Sobic006G203100 Sobic008G156300--Sobic006G203100 Sobic001G432300 Sobic001G432300 Sobic008G156300--Sobic001G432300 Sobic010G274500 Sobic010G274500 Sobic008G156300--Sobic010G274500 Sobic005G229166 Sobic005G229166 Sobic008G156300--Sobic005G229166 Sobic010G050200 Sobic010G050200 Sobic008G156300--Sobic010G050200 Sobic002G114800 Sobic002G114800 Sobic008G156300--Sobic002G114800 Sobic002G306700 Sobic002G306700 Sobic008G156300--Sobic002G306700 Sobic001G540100 Sobic001G540100 Sobic008G156300--Sobic001G540100 Sobic002G408800 Sobic002G408800 Sobic007G120800--Sobic002G408800 Sobic002G029300 Sobic002G029300 Sobic007G120800--Sobic002G029300 Sobic002G194800 Sobic002G194800 Sobic007G120800--Sobic002G194800 Sobic006G056200 Sobic006G056200 Sobic007G120800--Sobic006G056200 Sobic007G120800--Sobic008G156300 Sobic007G173700 Sobic007G173700 Sobic007G120800--Sobic007G173700 Sobic001G161700 Sobic001G161700 Sobic007G120800--Sobic001G161700 Sobic006G259401 Sobic006G259401 Sobic007G120800--Sobic006G259401 Sobic007G065500 Sobic007G065500 Sobic007G120800--Sobic007G065500 Sobic002G256200 Sobic002G256200 Sobic006G203100--Sobic002G256200 Sobic010G073100 Sobic010G073100 Sobic006G203100--Sobic010G073100 Sobic002G341800 Sobic002G341800 Sobic006G203100--Sobic002G341800 Sobic008G145100 Sobic008G145100 Sobic006G203100--Sobic008G145100 Sobic001G338400 Sobic001G338400 Sobic006G203100--Sobic001G338400 Sobic001G145500 Sobic001G145500 Sobic006G203100--Sobic001G145500 Sobic006G203100--Sobic002G029300 Sobic001G249700 Sobic001G249700 Sobic006G203100--Sobic001G249700 Sobic006G183000 Sobic006G183000 Sobic006G203100--Sobic006G183000 Sobic008G083400 Sobic008G083400 Sobic001G432300--Sobic008G083400 Sobic003G130600 Sobic003G130600 Sobic001G432300--Sobic003G130600 Sobic004G249300 Sobic004G249300 Sobic001G432300--Sobic004G249300 Sobic001G242800 Sobic001G242800 Sobic001G432300--Sobic001G242800 Sobic001G432300--Sobic008G156300 Sobic004G326600 Sobic004G326600 Sobic001G432300--Sobic004G326600 Sobic002G392800 Sobic002G392800 Sobic001G432300--Sobic002G392800 Sobic001G228200 Sobic001G228200 Sobic001G432300--Sobic001G228200 Sobic008G191500 Sobic008G191500 Sobic001G432300--Sobic008G191500 Sobic010G188400 Sobic010G188400 Sobic010G274500--Sobic010G188400 Sobic002G376300 Sobic002G376300 Sobic010G274500--Sobic002G376300 Sobic009G177400 Sobic009G177400 Sobic010G274500--Sobic009G177400 Sobic010G274500--Sobic008G156300 Sobic002G392700 Sobic002G392700 Sobic010G274500--Sobic002G392700 Sobic010G274500--Sobic005G229166 Sobic001G120300 Sobic001G120300 Sobic010G274500--Sobic001G120300 Sobic002G189400 Sobic002G189400 Sobic010G274500--Sobic002G189400 Sobic003G145900 Sobic003G145900 Sobic010G274500--Sobic003G145900 Sobic001G057200 Sobic001G057200 Sobic005G229166--Sobic001G057200 Sobic005G229166--Sobic010G274500 Sobic005G091600 Sobic005G091600 Sobic005G229166--Sobic005G091600 Sobic005G229166--Sobic008G156300 Sobic002G092300 Sobic002G092300 Sobic005G229166--Sobic002G092300 Sobic004G057800 Sobic004G057800 Sobic005G229166--Sobic004G057800 Sobic010G080200 Sobic010G080200 Sobic005G229166--Sobic010G080200 Sobic010G067700 Sobic010G067700 Sobic005G229166--Sobic010G067700 Sobic008G147700 Sobic008G147700 Sobic005G229166--Sobic008G147700 Sobic006G179700 Sobic006G179700 Sobic010G050200--Sobic006G179700 Sobic010G050200--Sobic008G156300 Sobic006G177300 Sobic006G177300 Sobic010G050200--Sobic006G177300 Sobic010G050200--Sobic006G203100 Sobic002G143000 Sobic002G143000 Sobic010G050200--Sobic002G143000 Sobic005G105500 Sobic005G105500 Sobic010G050200--Sobic005G105500 Sobic004G081800 Sobic004G081800 Sobic010G050200--Sobic004G081800 Sobic006G126200 Sobic006G126200 Sobic010G050200--Sobic006G126200 Sobic010G050200--Sobic001G242800 Sobic001G049200 Sobic001G049200 Sobic002G114800--Sobic001G049200 Sobic002G114800--Sobic009G177400 Sobic001G328000 Sobic001G328000 Sobic002G114800--Sobic001G328000 Sobic004G163300 Sobic004G163300 Sobic002G114800--Sobic004G163300 Sobic004G173600 Sobic004G173600 Sobic002G114800--Sobic004G173600 Sobic009G102300 Sobic009G102300 Sobic002G114800--Sobic009G102300 Sobic002G114800--Sobic002G306700 Sobic005G134600 Sobic005G134600 Sobic002G114800--Sobic005G134600 Sobic002G114800--Sobic001G540100 Sobic004G079700 Sobic004G079700 Sobic002G306700--Sobic004G079700 Sobic002G306700--Sobic002G114800 Sobic003G432100 Sobic003G432100 Sobic002G306700--Sobic003G432100 Sobic002G306700--Sobic002G408800 Sobic002G306700--Sobic008G156300 Sobic002G306700--Sobic007G120800 Sobic006G243500 Sobic006G243500 Sobic002G306700--Sobic006G243500 Sobic002G306700--Sobic004G163300 Sobic005G075600 Sobic005G075600 Sobic002G306700--Sobic005G075600 Sobic001G540100--Sobic002G114800 Sobic001G540100--Sobic004G173600 Sobic007G092600 Sobic007G092600 Sobic001G540100--Sobic007G092600 Sobic001G540100--Sobic001G057200 Sobic001G540100--Sobic009G177400 Sobic001G540100--Sobic010G274500 Sobic001G540100--Sobic008G156300 Sobic002G187300 Sobic002G187300 Sobic001G540100--Sobic002G187300 Sobic010G084000 Sobic010G084000 Sobic001G540100--Sobic010G084000
Octagon: transcription factors


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