Gene annotation
Transcriptome id Sobic.003G130600.1
Synonym Sb03g011110, HISN2, AT-IE
Functional annotation MazG nucleotide pyrophosphohydrolase domain containing protein, expressed
UniProt C5XH91
Pfam PF01503 PF01502
Panther DB PTHR21256 PTHR21256:SF3
NCBI CDD -
KEGG Orthology K11755; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase
Gene Ontology GO:0004635; phosphoribosyl-AMP cyclohydrolase activity GO:0000105histidine biosynthetic process


Orthologs (automatic annotation)
TAIR AT1G31860 : histidine biosynthesis bifunctional protein (HISIE)
RAP-DB (Rice) LOC_Os01g16940.1 : MazG nucleotide pyrophosphohydrolase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a035205
Brachypodium -
Barley HORVU3Hr1G039130.4 , HORVU3Hr1G039130.3 , HORVU3Hr1G039130.2
Wheat TraesCS3A02G189000 , TraesCS3B02G218200 , TraesCS3D02G192500
Populus -


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cDNA sequences
Sobic.003G130600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G432300 imidazole glycerol phosphate synthase hisHF, chloroplast precursor, putative, expressed K01663: imidazole glycerol-phosphate synthase
2 Sobic.010G008100 RNA recognition motif containing protein, putative, expressed -
3 Sobic.006G203100 expressed protein -
4 Sobic.003G424800 MKI67 FHA domain-interacting nucleolar phosphoprotein(PubMedID : 24906815)@RNA recognition motif containing protein, putative, expressed K14838: nucleolar protein 15
5 Sobic.001G096100 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
6 Sobic.001G010700 proteasome subunit, putative, expressed K03035: PSMD12, 26S proteasome regulatory subunit N5
7 Sobic.010G073100 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
8 Sobic.003G186700 ubiquitin carboxyl-terminal hydrolase 6, putative, expressed K11843: USP14, ubiquitin carboxyl-terminal hydrolase 14
9 Sobic.002G341800 eukaryotic translation initiation factor 2 subunit gamma, putative, expressed K03242: translation initiation factor 2 subunit 3
10 Sobic.004G069500 expressed protein -
11 Sobic.001G382200 eukaryotic translation initiation factor 2 subunit beta, putative, expressed K03238: translation initiation factor 2 subunit 2
12 Sobic.002G033400 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
13 Sobic.002G353000 5-formyltetrahydrofolate cyclo-ligase, putative, expressed K01934: 5-formyltetrahydrofolate cyclo-ligase
14 Sobic.009G008600 REX1 DNA Repair family protein, expressed K10845: TTDA, GTF2H5, TFIIH basal transcription factor complex TTD-A subunit
15 Sobic.001G168600 serpin domain containing protein, putative, expressed K13963: serpin B
16 Sobic.006G222400 RNA recognition motif containing protein, putative, expressed -
17 Sobic.004G249300 proteasome subunit, putative, expressed K15030: translation initiation factor 3 subunit M
18 Sobic.001G402600 expressed protein -
19 Sobic.002G184900 SCO1 protein homolog, mitochondrial precursor, putative, expressed K07152: protein SCO1
20 Sobic.009G201800 MPPN domain containing protein, expressed K14313: NUP35, nuclear pore complex protein Nup53


Gene co-expression network
sample Sobic003G130600 Sobic003G130600 Sobic001G432300 Sobic001G432300 Sobic003G130600--Sobic001G432300 Sobic010G008100 Sobic010G008100 Sobic003G130600--Sobic010G008100 Sobic006G203100 Sobic006G203100 Sobic003G130600--Sobic006G203100 Sobic003G424800 Sobic003G424800 Sobic003G130600--Sobic003G424800 Sobic001G096100 Sobic001G096100 Sobic003G130600--Sobic001G096100 Sobic001G010700 Sobic001G010700 Sobic003G130600--Sobic001G010700 Sobic010G073100 Sobic010G073100 Sobic003G130600--Sobic010G073100 Sobic003G186700 Sobic003G186700 Sobic003G130600--Sobic003G186700 Sobic002G341800 Sobic002G341800 Sobic003G130600--Sobic002G341800 Sobic008G083400 Sobic008G083400 Sobic001G432300--Sobic008G083400 Sobic001G432300--Sobic003G130600 Sobic004G249300 Sobic004G249300 Sobic001G432300--Sobic004G249300 Sobic001G242800 Sobic001G242800 Sobic001G432300--Sobic001G242800 Sobic008G156300 Sobic008G156300 Sobic001G432300--Sobic008G156300 Sobic004G326600 Sobic004G326600 Sobic001G432300--Sobic004G326600 Sobic002G392800 Sobic002G392800 Sobic001G432300--Sobic002G392800 Sobic001G228200 Sobic001G228200 Sobic001G432300--Sobic001G228200 Sobic008G191500 Sobic008G191500 Sobic001G432300--Sobic008G191500 Sobic001G403700 Sobic001G403700 Sobic010G008100--Sobic001G403700 Sobic009G008600 Sobic009G008600 Sobic010G008100--Sobic009G008600 Sobic008G132800 Sobic008G132800 Sobic010G008100--Sobic008G132800 Sobic009G104000 Sobic009G104000 Sobic010G008100--Sobic009G104000 Sobic010G008100--Sobic003G424800 Sobic010G213400 Sobic010G213400 Sobic010G008100--Sobic010G213400 Sobic002G078400 Sobic002G078400 Sobic010G008100--Sobic002G078400 Sobic001G331900 Sobic001G331900 Sobic010G008100--Sobic001G331900 Sobic005G157200 Sobic005G157200 Sobic010G008100--Sobic005G157200 Sobic002G256200 Sobic002G256200 Sobic006G203100--Sobic002G256200 Sobic006G203100--Sobic010G073100 Sobic006G203100--Sobic002G341800 Sobic008G145100 Sobic008G145100 Sobic006G203100--Sobic008G145100 Sobic001G338400 Sobic001G338400 Sobic006G203100--Sobic001G338400 Sobic001G145500 Sobic001G145500 Sobic006G203100--Sobic001G145500 Sobic002G029300 Sobic002G029300 Sobic006G203100--Sobic002G029300 Sobic001G249700 Sobic001G249700 Sobic006G203100--Sobic001G249700 Sobic006G183000 Sobic006G183000 Sobic006G203100--Sobic006G183000 Sobic001G117400 Sobic001G117400 Sobic003G424800--Sobic001G117400 Sobic002G116200 Sobic002G116200 Sobic003G424800--Sobic002G116200 Sobic002G413400 Sobic002G413400 Sobic003G424800--Sobic002G413400 Sobic001G147100 Sobic001G147100 Sobic003G424800--Sobic001G147100 Sobic003G362400 Sobic003G362400 Sobic003G424800--Sobic003G362400 Sobic001G529000 Sobic001G529000 Sobic003G424800--Sobic001G529000 Sobic003G424800--Sobic010G008100 Sobic003G424800--Sobic009G008600 Sobic003G424800--Sobic001G331900 Sobic004G066800 Sobic004G066800 Sobic001G096100--Sobic004G066800 Sobic004G138800 Sobic004G138800 Sobic001G096100--Sobic004G138800 Sobic003G330500 Sobic003G330500 Sobic001G096100--Sobic003G330500 Sobic006G252200 Sobic006G252200 Sobic001G096100--Sobic006G252200 Sobic004G224900 Sobic004G224900 Sobic001G096100--Sobic004G224900 Sobic002G255100 Sobic002G255100 Sobic001G096100--Sobic002G255100 Sobic001G481700 Sobic001G481700 Sobic001G096100--Sobic001G481700 Sobic003G196800 Sobic003G196800 Sobic001G096100--Sobic003G196800 Sobic010G038700 Sobic010G038700 Sobic001G096100--Sobic010G038700 Sobic007G176200 Sobic007G176200 Sobic001G010700--Sobic007G176200 Sobic001G010700--Sobic006G252200 Sobic001G458700 Sobic001G458700 Sobic001G010700--Sobic001G458700 Sobic001G010700--Sobic003G330500 Sobic004G335000 Sobic004G335000 Sobic001G010700--Sobic004G335000 Sobic002G428200 Sobic002G428200 Sobic001G010700--Sobic002G428200 Sobic001G010700--Sobic004G224900 Sobic003G043400 Sobic003G043400 Sobic001G010700--Sobic003G043400 Sobic002G423800 Sobic002G423800 Sobic001G010700--Sobic002G423800 Sobic002G113800 Sobic002G113800 Sobic010G073100--Sobic002G113800 Sobic010G073100--Sobic008G145100 Sobic007G184500 Sobic007G184500 Sobic010G073100--Sobic007G184500 Sobic001G033500 Sobic001G033500 Sobic010G073100--Sobic001G033500 Sobic010G073100--Sobic006G203100 Sobic004G010900 Sobic004G010900 Sobic010G073100--Sobic004G010900 Sobic002G281300 Sobic002G281300 Sobic010G073100--Sobic002G281300 Sobic006G044600 Sobic006G044600 Sobic010G073100--Sobic006G044600 Sobic010G073100--Sobic001G010700 Sobic004G082900 Sobic004G082900 Sobic003G186700--Sobic004G082900 Sobic002G419100 Sobic002G419100 Sobic003G186700--Sobic002G419100 Sobic003G186700--Sobic006G044600 Sobic003G280300 Sobic003G280300 Sobic003G186700--Sobic003G280300 Sobic004G176400 Sobic004G176400 Sobic003G186700--Sobic004G176400 Sobic003G422900 Sobic003G422900 Sobic003G186700--Sobic003G422900 Sobic009G139800 Sobic009G139800 Sobic003G186700--Sobic009G139800 Sobic003G186700--Sobic001G010700 Sobic003G186700--Sobic002G341800 Sobic002G341800--Sobic001G458700 Sobic001G404100 Sobic001G404100 Sobic002G341800--Sobic001G404100 Sobic002G341800--Sobic001G481700 Sobic002G341800--Sobic007G176200 Sobic002G341800--Sobic006G044600 Sobic002G394600 Sobic002G394600 Sobic002G341800--Sobic002G394600 Sobic005G105500 Sobic005G105500 Sobic002G341800--Sobic005G105500 Sobic008G137600 Sobic008G137600 Sobic002G341800--Sobic008G137600 Sobic004G081800 Sobic004G081800 Sobic002G341800--Sobic004G081800
Octagon: transcription factors


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