Gene annotation
Transcriptome id Sobic.004G069500.1
Synonym Sb04g005830
Functional annotation expressed protein
UniProt C5XWZ2
Pfam -
Panther DB PTHR36387 PTHR36387:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G37090 : -
RAP-DB (Rice) LOC_Os02g09380.1 : expressed protein
MaizeGDB (Corn) Zm00025a019331 , Zm00025a034719
Brachypodium KQJ93717
Barley -
Wheat TraesCS6B02G204700 , TraesCS6A02G180800
Populus -


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cDNA sequences
Sobic.004G069500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G424800 MKI67 FHA domain-interacting nucleolar phosphoprotein(PubMedID : 24906815)@RNA recognition motif containing protein, putative, expressed K14838: nucleolar protein 15
2 Sobic.004G130200 ribosome biogenesis protein NEP1, putative, expressed K14568: EMG1, rRNA small subunit pseudouridine methyltransferase Nep1
3 Sobic.002G392800 thymidylate kinase, putative, expressed K00943: tmk, dTMP kinase
4 Sobic.004G310900 emp24/gp25L/p24 family protein, putative, expressed -
5 Sobic.004G352200 expressed protein -
6 Sobic.003G160900 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
7 Sobic.003G130600 MazG nucleotide pyrophosphohydrolase domain containing protein, expressed K11755: phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase
8 Sobic.001G117400 DNA-directed RNA polymerase I subunit RPA12, putative, expressed K03000: RPA12, DNA-directed RNA polymerase I subunit RPA12
9 Sobic.009G211700 ZOS5-12 - C2H2 zinc finger protein, expressed -
10 Sobic.001G091900 WD domain, G-beta repeat domain containing protein, expressed K15443: TRM82, tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
11 Sobic.001G331900 expressed protein -
12 Sobic.010G008100 RNA recognition motif containing protein, putative, expressed -
13 Sobic.004G248900 50S ribosomal protein L17, putative, expressed K02879: RP-L17, MRPL17, large subunit ribosomal protein L17
14 Sobic.002G353000 5-formyltetrahydrofolate cyclo-ligase, putative, expressed K01934: 5-formyltetrahydrofolate cyclo-ligase
15 Sobic.001G096100 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
16 Sobic.006G150600 hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
17 Sobic.010G042800 peptidase, T1 family, putative, expressed K02737: 20S proteasome subunit beta 5
18 Sobic.005G027300 ribosomal protein L24, putative, expressed K02895: RP-L24, MRPL24, large subunit ribosomal protein L24
19 Sobic.003G044400 LSM domain containing protein, expressed K11098: SNRPF, small nuclear ribonucleoprotein F
20 Sobic.002G084500 expressed protein -


Gene co-expression network
sample Sobic004G069500 Sobic004G069500 Sobic003G424800 Sobic003G424800 Sobic004G069500--Sobic003G424800 Sobic004G130200 Sobic004G130200 Sobic004G069500--Sobic004G130200 Sobic002G392800 Sobic002G392800 Sobic004G069500--Sobic002G392800 Sobic004G310900 Sobic004G310900 Sobic004G069500--Sobic004G310900 Sobic004G352200 Sobic004G352200 Sobic004G069500--Sobic004G352200 Sobic003G160900 Sobic003G160900 Sobic004G069500--Sobic003G160900 Sobic003G130600 Sobic003G130600 Sobic004G069500--Sobic003G130600 Sobic001G117400 Sobic001G117400 Sobic004G069500--Sobic001G117400 Sobic009G211700 Sobic009G211700 Sobic004G069500--Sobic009G211700 Sobic003G424800--Sobic001G117400 Sobic002G116200 Sobic002G116200 Sobic003G424800--Sobic002G116200 Sobic002G413400 Sobic002G413400 Sobic003G424800--Sobic002G413400 Sobic001G147100 Sobic001G147100 Sobic003G424800--Sobic001G147100 Sobic003G362400 Sobic003G362400 Sobic003G424800--Sobic003G362400 Sobic001G529000 Sobic001G529000 Sobic003G424800--Sobic001G529000 Sobic010G008100 Sobic010G008100 Sobic003G424800--Sobic010G008100 Sobic009G008600 Sobic009G008600 Sobic003G424800--Sobic009G008600 Sobic001G331900 Sobic001G331900 Sobic003G424800--Sobic001G331900 Sobic002G406600 Sobic002G406600 Sobic004G130200--Sobic002G406600 Sobic004G130200--Sobic003G424800 Sobic001G404100 Sobic001G404100 Sobic004G130200--Sobic001G404100 Sobic004G130200--Sobic004G069500 Sobic004G248900 Sobic004G248900 Sobic004G130200--Sobic004G248900 Sobic004G130200--Sobic001G117400 Sobic002G341800 Sobic002G341800 Sobic004G130200--Sobic002G341800 Sobic009G190300 Sobic009G190300 Sobic004G130200--Sobic009G190300 Sobic004G130200--Sobic001G147100 Sobic001G242800 Sobic001G242800 Sobic002G392800--Sobic001G242800 Sobic001G112700 Sobic001G112700 Sobic002G392800--Sobic001G112700 Sobic008G004100 Sobic008G004100 Sobic002G392800--Sobic008G004100 Sobic002G392800--Sobic003G160900 Sobic010G080500 Sobic010G080500 Sobic002G392800--Sobic010G080500 Sobic006G002700 Sobic006G002700 Sobic002G392800--Sobic006G002700 Sobic009G238900 Sobic009G238900 Sobic002G392800--Sobic009G238900 Sobic009G117000 Sobic009G117000 Sobic002G392800--Sobic009G117000 Sobic008G132700 Sobic008G132700 Sobic002G392800--Sobic008G132700 Sobic010G042800 Sobic010G042800 Sobic004G310900--Sobic010G042800 Sobic008G094600 Sobic008G094600 Sobic004G310900--Sobic008G094600 Sobic008G098800 Sobic008G098800 Sobic004G310900--Sobic008G098800 Sobic001G304400 Sobic001G304400 Sobic004G310900--Sobic001G304400 Sobic002G406500 Sobic002G406500 Sobic004G310900--Sobic002G406500 Sobic001G030300 Sobic001G030300 Sobic004G310900--Sobic001G030300 Sobic001G517600 Sobic001G517600 Sobic004G310900--Sobic001G517600 Sobic001G018200 Sobic001G018200 Sobic004G310900--Sobic001G018200 Sobic009G191200 Sobic009G191200 Sobic004G310900--Sobic009G191200 Sobic004G352200--Sobic003G160900 Sobic003G044400 Sobic003G044400 Sobic004G352200--Sobic003G044400 Sobic004G352200--Sobic001G117400 Sobic002G371100 Sobic002G371100 Sobic004G352200--Sobic002G371100 Sobic003G063300 Sobic003G063300 Sobic004G352200--Sobic003G063300 Sobic001G018800 Sobic001G018800 Sobic004G352200--Sobic001G018800 Sobic004G352200--Sobic004G069500 Sobic003G127700 Sobic003G127700 Sobic004G352200--Sobic003G127700 Sobic004G352200--Sobic001G331900 Sobic006G216600 Sobic006G216600 Sobic003G160900--Sobic006G216600 Sobic003G287300 Sobic003G287300 Sobic003G160900--Sobic003G287300 Sobic001G481700 Sobic001G481700 Sobic003G160900--Sobic001G481700 Sobic003G160900--Sobic001G117400 Sobic001G057300 Sobic001G057300 Sobic003G160900--Sobic001G057300 Sobic009G144300 Sobic009G144300 Sobic003G160900--Sobic009G144300 Sobic004G002350 Sobic004G002350 Sobic003G160900--Sobic004G002350 Sobic003G160900--Sobic009G211700 Sobic001G091900 Sobic001G091900 Sobic003G160900--Sobic001G091900 Sobic001G432300 Sobic001G432300 Sobic003G130600--Sobic001G432300 Sobic003G130600--Sobic010G008100 Sobic006G203100 Sobic006G203100 Sobic003G130600--Sobic006G203100 Sobic003G130600--Sobic003G424800 Sobic001G096100 Sobic001G096100 Sobic003G130600--Sobic001G096100 Sobic001G010700 Sobic001G010700 Sobic003G130600--Sobic001G010700 Sobic010G073100 Sobic010G073100 Sobic003G130600--Sobic010G073100 Sobic003G186700 Sobic003G186700 Sobic003G130600--Sobic003G186700 Sobic003G130600--Sobic002G341800 Sobic001G117400--Sobic003G160900 Sobic001G117400--Sobic003G424800 Sobic001G117400--Sobic002G371100 Sobic005G191600 Sobic005G191600 Sobic001G117400--Sobic005G191600 Sobic002G255100 Sobic002G255100 Sobic001G117400--Sobic002G255100 Sobic001G117400--Sobic004G002350 Sobic001G117400--Sobic001G018800 Sobic001G117400--Sobic001G404100 Sobic001G117400--Sobic001G481700 Sobic009G211700--Sobic003G160900 Sobic009G211700--Sobic001G091900 Sobic001G371100 Sobic001G371100 Sobic009G211700--Sobic001G371100 Sobic009G040500 Sobic009G040500 Sobic009G211700--Sobic009G040500 Sobic005G027300 Sobic005G027300 Sobic009G211700--Sobic005G027300 Sobic003G198300 Sobic003G198300 Sobic009G211700--Sobic003G198300 Sobic004G326600 Sobic004G326600 Sobic009G211700--Sobic004G326600 Sobic006G098500 Sobic006G098500 Sobic009G211700--Sobic006G098500 Sobic001G230200 Sobic001G230200 Sobic009G211700--Sobic001G230200
Octagon: transcription factors


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