Gene annotation
Transcriptome id Sobic.001G168600.1
Synonym Sb01g014740
Functional annotation serpin domain containing protein, putative, expressed
UniProt A0A1B6QJE0
Pfam PF00079
Panther DB PTHR11461 PTHR11461:SF171
NCBI CDD KOG2392; Serpin
KEGG Orthology K13963; serpin B
Gene Ontology GO:0005615; extracellular space


Orthologs (automatic annotation)
TAIR AT1G47710 : Serine protease inhibitor (SERPIN) family protein
RAP-DB (Rice) LOC_Os03g41438.1 : serpin domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a017310
Brachypodium KQK14207 , KQK14206
Barley HORVU4Hr1G013550.1 , HORVU4Hr1G013550.2 , HORVU4Hr1G013550.3 , HORVU4Hr1G013520.1 , HORVU4Hr1G013560.1
Wheat TraesCS7B02G076300 , TraesCS4B02G079100 , TraesCS7D02G172000 , TraesCS4B02G079200 , TraesCS5B02G419900 , TraesCS4D02G078000 , TraesCS4A02G235700 , TraesCS5A02G359700
Populus -


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cDNA sequences
Sobic.001G168600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G400800 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2
2 Sobic.004G282700 synthase, putative, expressed K12451: 3,5-epimerase/4-reductase
3 Sobic.007G076300 26S proteasome non-ATPase regulatory subunit 8, putative, expressed K03031: PSMD8, 26S proteasome regulatory subunit N12
4 Sobic.002G252000 CHIT13 - Chitinase family protein precursor, expressed -
5 Sobic.006G008400 receptor protein kinase, putative, expressed -
6 Sobic.003G410500 transaldolase, putative, expressed K00616: E2.2.1.2, talA, transaldolase
7 Sobic.009G236100 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
8 Sobic.001G096100 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
9 Sobic.003G130600 MazG nucleotide pyrophosphohydrolase domain containing protein, expressed K11755: phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase
10 Sobic.002G353000 5-formyltetrahydrofolate cyclo-ligase, putative, expressed K01934: 5-formyltetrahydrofolate cyclo-ligase
11 Sobic.001G304400 expressed protein -
12 Sobic.004G138800 prefoldin subunit, putative, expressed K09548: prefoldin subunit 1
13 Sobic.001G432300 imidazole glycerol phosphate synthase hisHF, chloroplast precursor, putative, expressed K01663: imidazole glycerol-phosphate synthase
14 Sobic.006G211800 coatomer subunit epsilon, putative, expressed K17268: coatomer subunit epsilon
15 Sobic.003G330500 peptidase, T1 family, putative, expressed -
16 Sobic.004G010700 expressed protein -
17 Sobic.009G017500 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
18 Sobic.009G104100 peptidase, M24 family protein, putative, expressed -
19 Sobic.003G094800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinacetylesterase domain containing protein, expressed -
20 Sobic.010G088300 serine/threonine-protein phosphatase 2A activator 2, putative, expressed K17605: PPP2R4, serine/threonine-protein phosphatase 2A activator


Gene co-expression network
sample Sobic001G168600 Sobic001G168600 Sobic003G400800 Sobic003G400800 Sobic001G168600--Sobic003G400800 Sobic004G282700 Sobic004G282700 Sobic001G168600--Sobic004G282700 Sobic007G076300 Sobic007G076300 Sobic001G168600--Sobic007G076300 Sobic002G252000 Sobic002G252000 Sobic001G168600--Sobic002G252000 Sobic006G008400 Sobic006G008400 Sobic001G168600--Sobic006G008400 Sobic003G410500 Sobic003G410500 Sobic001G168600--Sobic003G410500 Sobic009G236100 Sobic009G236100 Sobic001G168600--Sobic009G236100 Sobic001G096100 Sobic001G096100 Sobic001G168600--Sobic001G096100 Sobic003G130600 Sobic003G130600 Sobic001G168600--Sobic003G130600 Sobic003G400800--Sobic001G096100 Sobic009G130400 Sobic009G130400 Sobic003G400800--Sobic009G130400 Sobic008G135000 Sobic008G135000 Sobic003G400800--Sobic008G135000 Sobic009G016500 Sobic009G016500 Sobic003G400800--Sobic009G016500 Sobic003G400800--Sobic001G168600 Sobic002G331300 Sobic002G331300 Sobic003G400800--Sobic002G331300 Sobic009G212300 Sobic009G212300 Sobic003G400800--Sobic009G212300 Sobic002G255100 Sobic002G255100 Sobic003G400800--Sobic002G255100 Sobic007G092100 Sobic007G092100 Sobic003G400800--Sobic007G092100 Sobic003G170300 Sobic003G170300 Sobic004G282700--Sobic003G170300 Sobic010G264300 Sobic010G264300 Sobic004G282700--Sobic010G264300 Sobic002G180300 Sobic002G180300 Sobic004G282700--Sobic002G180300 Sobic004G282700--Sobic001G096100 Sobic002G356400 Sobic002G356400 Sobic004G282700--Sobic002G356400 Sobic001G304400 Sobic001G304400 Sobic004G282700--Sobic001G304400 Sobic006G038200 Sobic006G038200 Sobic004G282700--Sobic006G038200 Sobic005G194900 Sobic005G194900 Sobic004G282700--Sobic005G194900 Sobic008G132400 Sobic008G132400 Sobic004G282700--Sobic008G132400 Sobic004G224900 Sobic004G224900 Sobic007G076300--Sobic004G224900 Sobic004G138800 Sobic004G138800 Sobic007G076300--Sobic004G138800 Sobic002G257400 Sobic002G257400 Sobic007G076300--Sobic002G257400 Sobic003G330500 Sobic003G330500 Sobic007G076300--Sobic003G330500 Sobic001G505500 Sobic001G505500 Sobic007G076300--Sobic001G505500 Sobic003G129800 Sobic003G129800 Sobic007G076300--Sobic003G129800 Sobic004G310300 Sobic004G310300 Sobic007G076300--Sobic004G310300 Sobic005G050500 Sobic005G050500 Sobic007G076300--Sobic005G050500 Sobic010G154700 Sobic010G154700 Sobic007G076300--Sobic010G154700 Sobic002G128800 Sobic002G128800 Sobic002G252000--Sobic002G128800 Sobic002G338400 Sobic002G338400 Sobic002G252000--Sobic002G338400 Sobic001G418100 Sobic001G418100 Sobic002G252000--Sobic001G418100 Sobic002G396400 Sobic002G396400 Sobic002G252000--Sobic002G396400 Sobic006G156000 Sobic006G156000 Sobic002G252000--Sobic006G156000 Sobic001G038300 Sobic001G038300 Sobic002G252000--Sobic001G038300 Sobic001G107100 Sobic001G107100 Sobic002G252000--Sobic001G107100 Sobic003G443300 Sobic003G443300 Sobic002G252000--Sobic003G443300 Sobic003G219800 Sobic003G219800 Sobic002G252000--Sobic003G219800 Sobic009G238900 Sobic009G238900 Sobic006G008400--Sobic009G238900 Sobic006G008400--Sobic001G096100 Sobic006G002700 Sobic006G002700 Sobic006G008400--Sobic006G002700 Sobic006G008400--Sobic001G304400 Sobic006G008400--Sobic006G038200 Sobic009G062000 Sobic009G062000 Sobic006G008400--Sobic009G062000 Sobic003G206700 Sobic003G206700 Sobic006G008400--Sobic003G206700 Sobic006G008400--Sobic001G168600 Sobic001G289100 Sobic001G289100 Sobic006G008400--Sobic001G289100 Sobic001G040100 Sobic001G040100 Sobic003G410500--Sobic001G040100 Sobic001G444800 Sobic001G444800 Sobic003G410500--Sobic001G444800 Sobic003G410500--Sobic004G138800 Sobic003G410500--Sobic003G219800 Sobic002G257300 Sobic002G257300 Sobic003G410500--Sobic002G257300 Sobic003G410500--Sobic001G304400 Sobic003G363800 Sobic003G363800 Sobic003G410500--Sobic003G363800 Sobic009G212400 Sobic009G212400 Sobic003G410500--Sobic009G212400 Sobic003G410500--Sobic009G238900 Sobic007G047300 Sobic007G047300 Sobic009G236100--Sobic007G047300 Sobic004G111100 Sobic004G111100 Sobic009G236100--Sobic004G111100 Sobic001G360700 Sobic001G360700 Sobic009G236100--Sobic001G360700 Sobic010G101900 Sobic010G101900 Sobic009G236100--Sobic010G101900 Sobic003G257400 Sobic003G257400 Sobic009G236100--Sobic003G257400 Sobic009G215000 Sobic009G215000 Sobic009G236100--Sobic009G215000 Sobic003G227700 Sobic003G227700 Sobic009G236100--Sobic003G227700 Sobic003G368000 Sobic003G368000 Sobic009G236100--Sobic003G368000 Sobic001G006201 Sobic001G006201 Sobic009G236100--Sobic001G006201 Sobic004G066800 Sobic004G066800 Sobic001G096100--Sobic004G066800 Sobic001G096100--Sobic004G138800 Sobic001G096100--Sobic003G330500 Sobic006G252200 Sobic006G252200 Sobic001G096100--Sobic006G252200 Sobic001G096100--Sobic004G224900 Sobic001G096100--Sobic002G255100 Sobic001G481700 Sobic001G481700 Sobic001G096100--Sobic001G481700 Sobic003G196800 Sobic003G196800 Sobic001G096100--Sobic003G196800 Sobic010G038700 Sobic010G038700 Sobic001G096100--Sobic010G038700 Sobic001G432300 Sobic001G432300 Sobic003G130600--Sobic001G432300 Sobic010G008100 Sobic010G008100 Sobic003G130600--Sobic010G008100 Sobic006G203100 Sobic006G203100 Sobic003G130600--Sobic006G203100 Sobic003G424800 Sobic003G424800 Sobic003G130600--Sobic003G424800 Sobic003G130600--Sobic001G096100 Sobic001G010700 Sobic001G010700 Sobic003G130600--Sobic001G010700 Sobic010G073100 Sobic010G073100 Sobic003G130600--Sobic010G073100 Sobic003G186700 Sobic003G186700 Sobic003G130600--Sobic003G186700 Sobic002G341800 Sobic002G341800 Sobic003G130600--Sobic002G341800
Octagon: transcription factors


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