Gene annotation
Transcriptome id Sobic.006G008400.1
Synonym Sb06g000860
Functional annotation receptor protein kinase, putative, expressed
UniProt C5YBP2
Pfam PF03629
Panther DB PTHR31988 PTHR31988:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G34215 : Domain of unknown function (DUF303)
RAP-DB (Rice) LOC_Os04g01980.1 : receptor protein kinase, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ81643
Barley -
Wheat TraesCSU02G013000 , TraesCS2B02G046700 , TraesCS5D02G569700
Populus -


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cDNA sequences
Sobic.006G008400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G238900 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
2 Sobic.001G096100 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
3 Sobic.006G002700 OsRhmbd10 - Putative Rhomboid homologue, expressed -
4 Sobic.001G304400 expressed protein -
5 Sobic.006G038200 receptor protein kinase, putative, expressed -
6 Sobic.009G062000 ribosomal protein L51, putative, expressed K03946: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2
7 Sobic.003G206700 heavy metal-associated domain containing protein, expressed -
8 Sobic.001G168600 serpin domain containing protein, putative, expressed K13963: serpin B
9 Sobic.001G289100 cyclase/dehydrase family protein, putative, expressed K14496: abscisic acid receptor PYR/PYL family
10 Sobic.004G310900 emp24/gp25L/p24 family protein, putative, expressed -
11 Sobic.007G034400 RNA recognition motif containing protein, putative, expressed -
12 Sobic.004G282700 synthase, putative, expressed K12451: 3,5-epimerase/4-reductase
13 Sobic.001G058900 ribosomal protein S13p/S18e, putative, expressed K02964: RP-S18e, small subunit ribosomal protein S18e
14 Sobic.007G157900 gibberellin receptor GID1L2, putative, expressed -
15 Sobic.003G157700 expressed protein -
16 Sobic.001G444800 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
17 Sobic.001G116700 ubiquitin-conjugating enzyme, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
18 Sobic.008G135000 60S ribosomal protein L8, putative, expressed K02938: RP-L8e, large subunit ribosomal protein L8e
19 Sobic.001G087900 expressed protein -
20 Sobic.006G052400 LSM domain containing protein, expressed K12625: U6 snRNA-associated Sm-like protein LSm6


Gene co-expression network
sample Sobic006G008400 Sobic006G008400 Sobic009G238900 Sobic009G238900 Sobic006G008400--Sobic009G238900 Sobic001G096100 Sobic001G096100 Sobic006G008400--Sobic001G096100 Sobic006G002700 Sobic006G002700 Sobic006G008400--Sobic006G002700 Sobic001G304400 Sobic001G304400 Sobic006G008400--Sobic001G304400 Sobic006G038200 Sobic006G038200 Sobic006G008400--Sobic006G038200 Sobic009G062000 Sobic009G062000 Sobic006G008400--Sobic009G062000 Sobic003G206700 Sobic003G206700 Sobic006G008400--Sobic003G206700 Sobic001G168600 Sobic001G168600 Sobic006G008400--Sobic001G168600 Sobic001G289100 Sobic001G289100 Sobic006G008400--Sobic001G289100 Sobic003G219800 Sobic003G219800 Sobic009G238900--Sobic003G219800 Sobic001G444800 Sobic001G444800 Sobic009G238900--Sobic001G444800 Sobic005G112800 Sobic005G112800 Sobic009G238900--Sobic005G112800 Sobic006G035900 Sobic006G035900 Sobic009G238900--Sobic006G035900 Sobic001G040100 Sobic001G040100 Sobic009G238900--Sobic001G040100 Sobic001G418100 Sobic001G418100 Sobic009G238900--Sobic001G418100 Sobic002G361700 Sobic002G361700 Sobic009G238900--Sobic002G361700 Sobic003G443300 Sobic003G443300 Sobic009G238900--Sobic003G443300 Sobic001G514200 Sobic001G514200 Sobic009G238900--Sobic001G514200 Sobic004G066800 Sobic004G066800 Sobic001G096100--Sobic004G066800 Sobic004G138800 Sobic004G138800 Sobic001G096100--Sobic004G138800 Sobic003G330500 Sobic003G330500 Sobic001G096100--Sobic003G330500 Sobic006G252200 Sobic006G252200 Sobic001G096100--Sobic006G252200 Sobic004G224900 Sobic004G224900 Sobic001G096100--Sobic004G224900 Sobic002G255100 Sobic002G255100 Sobic001G096100--Sobic002G255100 Sobic001G481700 Sobic001G481700 Sobic001G096100--Sobic001G481700 Sobic003G196800 Sobic003G196800 Sobic001G096100--Sobic003G196800 Sobic010G038700 Sobic010G038700 Sobic001G096100--Sobic010G038700 Sobic006G002700--Sobic003G330500 Sobic001G007600 Sobic001G007600 Sobic006G002700--Sobic001G007600 Sobic001G110400 Sobic001G110400 Sobic006G002700--Sobic001G110400 Sobic006G002700--Sobic004G224900 Sobic006G002700--Sobic009G238900 Sobic006G002700--Sobic001G096100 Sobic001G502200 Sobic001G502200 Sobic006G002700--Sobic001G502200 Sobic009G088100 Sobic009G088100 Sobic006G002700--Sobic009G088100 Sobic002G392800 Sobic002G392800 Sobic006G002700--Sobic002G392800 Sobic001G304400--Sobic003G443300 Sobic001G432000 Sobic001G432000 Sobic001G304400--Sobic001G432000 Sobic001G286200 Sobic001G286200 Sobic001G304400--Sobic001G286200 Sobic003G249700 Sobic003G249700 Sobic001G304400--Sobic003G249700 Sobic009G212200 Sobic009G212200 Sobic001G304400--Sobic009G212200 Sobic007G019400 Sobic007G019400 Sobic001G304400--Sobic007G019400 Sobic002G304900 Sobic002G304900 Sobic001G304400--Sobic002G304900 Sobic003G150000 Sobic003G150000 Sobic001G304400--Sobic003G150000 Sobic001G304400--Sobic009G062000 Sobic003G170300 Sobic003G170300 Sobic006G038200--Sobic003G170300 Sobic004G282700 Sobic004G282700 Sobic006G038200--Sobic004G282700 Sobic002G338400 Sobic002G338400 Sobic006G038200--Sobic002G338400 Sobic010G264300 Sobic010G264300 Sobic006G038200--Sobic010G264300 Sobic008G178800 Sobic008G178800 Sobic006G038200--Sobic008G178800 Sobic009G017500 Sobic009G017500 Sobic006G038200--Sobic009G017500 Sobic003G216500 Sobic003G216500 Sobic006G038200--Sobic003G216500 Sobic001G035600 Sobic001G035600 Sobic006G038200--Sobic001G035600 Sobic006G075000 Sobic006G075000 Sobic006G038200--Sobic006G075000 Sobic009G062000--Sobic001G304400 Sobic001G095632 Sobic001G095632 Sobic009G062000--Sobic001G095632 Sobic008G129400 Sobic008G129400 Sobic009G062000--Sobic008G129400 Sobic009G062000--Sobic001G432000 Sobic010G018400 Sobic010G018400 Sobic009G062000--Sobic010G018400 Sobic004G351500 Sobic004G351500 Sobic009G062000--Sobic004G351500 Sobic003G305100 Sobic003G305100 Sobic009G062000--Sobic003G305100 Sobic009G062000--Sobic001G286200 Sobic002G073800 Sobic002G073800 Sobic009G062000--Sobic002G073800 Sobic001G059500 Sobic001G059500 Sobic003G206700--Sobic001G059500 Sobic001G144800 Sobic001G144800 Sobic003G206700--Sobic001G144800 Sobic009G008800 Sobic009G008800 Sobic003G206700--Sobic009G008800 Sobic003G368100 Sobic003G368100 Sobic003G206700--Sobic003G368100 Sobic001G059600 Sobic001G059600 Sobic003G206700--Sobic001G059600 Sobic001G068500 Sobic001G068500 Sobic003G206700--Sobic001G068500 Sobic002G244300 Sobic002G244300 Sobic003G206700--Sobic002G244300 Sobic003G341500 Sobic003G341500 Sobic003G206700--Sobic003G341500 Sobic001G046800 Sobic001G046800 Sobic003G206700--Sobic001G046800 Sobic003G400800 Sobic003G400800 Sobic001G168600--Sobic003G400800 Sobic001G168600--Sobic004G282700 Sobic007G076300 Sobic007G076300 Sobic001G168600--Sobic007G076300 Sobic002G252000 Sobic002G252000 Sobic001G168600--Sobic002G252000 Sobic001G168600--Sobic006G008400 Sobic003G410500 Sobic003G410500 Sobic001G168600--Sobic003G410500 Sobic009G236100 Sobic009G236100 Sobic001G168600--Sobic009G236100 Sobic001G168600--Sobic001G096100 Sobic003G130600 Sobic003G130600 Sobic001G168600--Sobic003G130600 Sobic002G320800 Sobic002G320800 Sobic001G289100--Sobic002G320800 Sobic002G115000 Sobic002G115000 Sobic001G289100--Sobic002G115000 Sobic001G086900 Sobic001G086900 Sobic001G289100--Sobic001G086900 Sobic001G289100--Sobic003G249700 Sobic003G109600 Sobic003G109600 Sobic001G289100--Sobic003G109600 Sobic001G483100 Sobic001G483100 Sobic001G289100--Sobic001G483100 Sobic001G289100--Sobic001G444800 Sobic001G058900 Sobic001G058900 Sobic001G289100--Sobic001G058900 Sobic001G039400 Sobic001G039400 Sobic001G289100--Sobic001G039400
Octagon: transcription factors


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