Gene annotation
Transcriptome id Sobic.006G179700.1
Synonym Sb06g025430
Functional annotation Ser/Thr-rich protein T10 in DGCR region, putative, expressed
UniProt A0A1B6PMK0
Pfam PF05742
Panther DB PTHR17985 PTHR17985:SF14
NCBI CDD KOG2342; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G38260 : Protein of unknown function (DUF833)
RAP-DB (Rice) LOC_Os04g47680.1 : Ser/Thr-rich protein T10 in DGCR region, putative, expressed
MaizeGDB (Corn) Zm00025a056801
Brachypodium KQJ84065
Barley HORVU2Hr1G095910.10 , HORVU2Hr1G095910.8 , HORVU2Hr1G095910.9 , HORVU2Hr1G095910.1 , HORVU2Hr1G095910.2 , HORVU2Hr1G095910.3 , HORVU2Hr1G095910.4 , HORVU2Hr1G095910.5 , HORVU2Hr1G095910.6
Wheat TraesCS2A02G404200 , TraesCS2B02G422200 , TraesCS2D02G401200 , TraesCS2D02G401200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G050200 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
2 Sobic.002G342500 glycosyltransferase sugar-binding region containing DXD motif, putative, expressed -
3 Sobic.006G177300 ATFUC1, putative, expressed K01206: alpha-L-fucosidase
4 Sobic.006G038200 receptor protein kinase, putative, expressed -
5 Sobic.010G212200 synthase, putative, expressed K02377: TSTA3, GDP-L-fucose synthase
6 Sobic.001G112700 class I glutamine amidotransferase, putative, expressed K01658: anthranilate synthase component II
7 Sobic.003G198500 XIK, putative, expressed K10357: myosin V
8 Sobic.008G088830 - -
9 Sobic.008G156300 kinase, pfkB family, putative, expressed K00868: pdxK, pyridoxine kinase
10 Sobic.004G248900 50S ribosomal protein L17, putative, expressed K02879: RP-L17, MRPL17, large subunit ribosomal protein L17
11 Sobic.005G105500 expressed protein -
12 Sobic.008G003600 PMR5, putative, expressed -
13 Sobic.007G188600 tRNA synthetase class II core domain containing protein, expressed K01880: GARS, glycyl-tRNA synthetase
14 Sobic.006G281500 prenylcysteine oxidase 1 precursor, putative, expressed K05906: PCYOX1, prenylcysteine oxidase / farnesylcysteine lyase
15 Sobic.001G366800 alpha-N-acetylglucosaminidase, putative, expressed K01205: alpha-N-acetylglucosaminidase
16 Sobic.001G222400 tetratricopeptide repeat domain containing protein, expressed -
17 Sobic.006G203100 expressed protein -
18 Sobic.001G145500 trafficking protein particle complex subunit 1, putative, expressed -
19 Sobic.003G182400 DNA-damage-repair/toleration protein DRT102, putative, expressed -
20 Sobic.001G322000 pollen ankyrin, putative, expressed K19044: E3 ubiquitin-protein ligase XBAT32/33


Gene co-expression network
sample Sobic006G179700 Sobic006G179700 Sobic010G050200 Sobic010G050200 Sobic006G179700--Sobic010G050200 Sobic002G342500 Sobic002G342500 Sobic006G179700--Sobic002G342500 Sobic006G177300 Sobic006G177300 Sobic006G179700--Sobic006G177300 Sobic006G038200 Sobic006G038200 Sobic006G179700--Sobic006G038200 Sobic010G212200 Sobic010G212200 Sobic006G179700--Sobic010G212200 Sobic001G112700 Sobic001G112700 Sobic006G179700--Sobic001G112700 Sobic003G198500 Sobic003G198500 Sobic006G179700--Sobic003G198500 Sobic008G088830 Sobic008G088830 Sobic006G179700--Sobic008G088830 Sobic008G156300 Sobic008G156300 Sobic006G179700--Sobic008G156300 Sobic010G050200--Sobic006G179700 Sobic010G050200--Sobic008G156300 Sobic010G050200--Sobic006G177300 Sobic006G203100 Sobic006G203100 Sobic010G050200--Sobic006G203100 Sobic002G143000 Sobic002G143000 Sobic010G050200--Sobic002G143000 Sobic005G105500 Sobic005G105500 Sobic010G050200--Sobic005G105500 Sobic004G081800 Sobic004G081800 Sobic010G050200--Sobic004G081800 Sobic006G126200 Sobic006G126200 Sobic010G050200--Sobic006G126200 Sobic001G242800 Sobic001G242800 Sobic010G050200--Sobic001G242800 Sobic001G338400 Sobic001G338400 Sobic002G342500--Sobic001G338400 Sobic005G074100 Sobic005G074100 Sobic002G342500--Sobic005G074100 Sobic001G145500 Sobic001G145500 Sobic002G342500--Sobic001G145500 Sobic003G348800 Sobic003G348800 Sobic002G342500--Sobic003G348800 Sobic001G322000 Sobic001G322000 Sobic002G342500--Sobic001G322000 Sobic002G342500--Sobic006G179700 Sobic007G013300 Sobic007G013300 Sobic002G342500--Sobic007G013300 Sobic007G161200 Sobic007G161200 Sobic002G342500--Sobic007G161200 Sobic003G053700 Sobic003G053700 Sobic002G342500--Sobic003G053700 Sobic006G000600 Sobic006G000600 Sobic006G177300--Sobic006G000600 Sobic001G057200 Sobic001G057200 Sobic006G177300--Sobic001G057200 Sobic001G366800 Sobic001G366800 Sobic006G177300--Sobic001G366800 Sobic006G177300--Sobic001G242800 Sobic006G177300--Sobic002G143000 Sobic002G259400 Sobic002G259400 Sobic006G177300--Sobic002G259400 Sobic006G177300--Sobic006G179700 Sobic003G376400 Sobic003G376400 Sobic006G177300--Sobic003G376400 Sobic006G177300--Sobic001G322000 Sobic003G170300 Sobic003G170300 Sobic006G038200--Sobic003G170300 Sobic004G282700 Sobic004G282700 Sobic006G038200--Sobic004G282700 Sobic002G338400 Sobic002G338400 Sobic006G038200--Sobic002G338400 Sobic010G264300 Sobic010G264300 Sobic006G038200--Sobic010G264300 Sobic008G178800 Sobic008G178800 Sobic006G038200--Sobic008G178800 Sobic009G017500 Sobic009G017500 Sobic006G038200--Sobic009G017500 Sobic003G216500 Sobic003G216500 Sobic006G038200--Sobic003G216500 Sobic001G035600 Sobic001G035600 Sobic006G038200--Sobic001G035600 Sobic006G075000 Sobic006G075000 Sobic006G038200--Sobic006G075000 Sobic001G060300 Sobic001G060300 Sobic010G212200--Sobic001G060300 Sobic004G262300 Sobic004G262300 Sobic010G212200--Sobic004G262300 Sobic001G392800 Sobic001G392800 Sobic010G212200--Sobic001G392800 Sobic010G212200--Sobic001G145500 Sobic001G451901 Sobic001G451901 Sobic010G212200--Sobic001G451901 Sobic003G330500 Sobic003G330500 Sobic010G212200--Sobic003G330500 Sobic004G164000 Sobic004G164000 Sobic010G212200--Sobic004G164000 Sobic002G402500 Sobic002G402500 Sobic010G212200--Sobic002G402500 Sobic001G240500 Sobic001G240500 Sobic010G212200--Sobic001G240500 Sobic002G392800 Sobic002G392800 Sobic001G112700--Sobic002G392800 Sobic001G112700--Sobic001G242800 Sobic002G353000 Sobic002G353000 Sobic001G112700--Sobic002G353000 Sobic006G002700 Sobic006G002700 Sobic001G112700--Sobic006G002700 Sobic001G096100 Sobic001G096100 Sobic001G112700--Sobic001G096100 Sobic002G309400 Sobic002G309400 Sobic001G112700--Sobic002G309400 Sobic003G290000 Sobic003G290000 Sobic001G112700--Sobic003G290000 Sobic009G126500 Sobic009G126500 Sobic001G112700--Sobic009G126500 Sobic010G060600 Sobic010G060600 Sobic001G112700--Sobic010G060600 Sobic009G079100 Sobic009G079100 Sobic003G198500--Sobic009G079100 Sobic010G090500 Sobic010G090500 Sobic003G198500--Sobic010G090500 Sobic001G073150 Sobic001G073150 Sobic003G198500--Sobic001G073150 Sobic003G366300 Sobic003G366300 Sobic003G198500--Sobic003G366300 Sobic002G312700 Sobic002G312700 Sobic003G198500--Sobic002G312700 Sobic004G051300 Sobic004G051300 Sobic003G198500--Sobic004G051300 Sobic009G246700 Sobic009G246700 Sobic003G198500--Sobic009G246700 Sobic010G022400 Sobic010G022400 Sobic003G198500--Sobic010G022400 Sobic008G174800 Sobic008G174800 Sobic003G198500--Sobic008G174800 Sobic001G230100 Sobic001G230100 Sobic008G088830--Sobic001G230100 Sobic006G281500 Sobic006G281500 Sobic008G088830--Sobic006G281500 Sobic004G132300 Sobic004G132300 Sobic008G088830--Sobic004G132300 Sobic010G002400 Sobic010G002400 Sobic008G088830--Sobic010G002400 Sobic003G400100 Sobic003G400100 Sobic008G088830--Sobic003G400100 Sobic003G273600 Sobic003G273600 Sobic008G088830--Sobic003G273600 Sobic008G088830--Sobic001G338400 Sobic004G082900 Sobic004G082900 Sobic008G088830--Sobic004G082900 Sobic006G280600 Sobic006G280600 Sobic008G088830--Sobic006G280600 Sobic007G120800 Sobic007G120800 Sobic008G156300--Sobic007G120800 Sobic008G156300--Sobic006G203100 Sobic001G432300 Sobic001G432300 Sobic008G156300--Sobic001G432300 Sobic010G274500 Sobic010G274500 Sobic008G156300--Sobic010G274500 Sobic005G229166 Sobic005G229166 Sobic008G156300--Sobic005G229166 Sobic008G156300--Sobic010G050200 Sobic002G114800 Sobic002G114800 Sobic008G156300--Sobic002G114800 Sobic002G306700 Sobic002G306700 Sobic008G156300--Sobic002G306700 Sobic001G540100 Sobic001G540100 Sobic008G156300--Sobic001G540100
Octagon: transcription factors


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