Gene annotation
Transcriptome id Sobic.001G322000.1
Synonym Sb01g031230, XBAT33
Functional annotation pollen ankyrin, putative, expressed
UniProt C5WUM2
Pfam PF13637 PF13857
Panther DB PTHR24128 PTHR24128:SF13
NCBI CDD KOG0502; Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate)
KEGG Orthology K19044; E3 ubiquitin-protein ligase XBAT32/33
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G07270 : XB3 ortholog 3 in Arabidopsis thaliana
RAP-DB (Rice) LOC_Os10g37730.1 : pollen ankyrin, putative, expressed
MaizeGDB (Corn) Zm00025a003072
Brachypodium PNT67742 , KQJ97499
Barley HORVU1Hr1G048560.5 , HORVU1Hr1G048560.1 , HORVU1Hr1G048560.6 , HORVU1Hr1G048560.8 , HORVU1Hr1G048560.2 , HORVU1Hr1G048560.3 , HORVU1Hr1G048560.4 , HORVU1Hr1G048560.7
Wheat TraesCS1D02G187300 , TraesCS1D02G187300 , TraesCS1B02G196800 , TraesCS1B02G196800 , TraesCS1A02G189100 , TraesCS1A02G189100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G408800 protein kinase family protein, putative, expressed K08819: cyclin-dependent kinase 12/13
2 Sobic.003G400100 leaf senescence related protein, putative, expressed -
3 Sobic.002G342500 glycosyltransferase sugar-binding region containing DXD motif, putative, expressed -
4 Sobic.001G261456 - -
5 Sobic.009G214900 expressed protein -
6 Sobic.003G126600 rab GDP dissociation inhibitor alpha, putative, expressed -
7 Sobic.K004100 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.004G057100 tubulin-specific chaperone E, putative, expressed -
9 Sobic.007G203500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor, putative, expressed -
10 Sobic.010G106900 NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed -
11 Sobic.010G269100 zinc finger family protein, putative, expressed -
12 Sobic.002G259400 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
13 Sobic.005G074100 hydrolase, acting on carbon-nitrogen, putative, expressed -
14 Sobic.008G002000 phospholipase C, putative, expressed K05857: phosphatidylinositol phospholipase C, delta
15 Sobic.006G177300 ATFUC1, putative, expressed K01206: alpha-L-fucosidase
16 Sobic.010G105600 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
17 Sobic.006G033700 wax synthase isoform 1, putative, expressed -
18 Sobic.001G023000 kelch motif family protein, putative, expressed -
19 Sobic.006G202200 ENTH domain containing protein, expressed K12471: epsin
20 Sobic.004G185600 expressed protein -


Gene co-expression network
sample Sobic001G322000 Sobic001G322000 Sobic002G408800 Sobic002G408800 Sobic001G322000--Sobic002G408800 Sobic003G400100 Sobic003G400100 Sobic001G322000--Sobic003G400100 Sobic002G342500 Sobic002G342500 Sobic001G322000--Sobic002G342500 Sobic001G261456 Sobic001G261456 Sobic001G322000--Sobic001G261456 Sobic009G214900 Sobic009G214900 Sobic001G322000--Sobic009G214900 Sobic003G126600 Sobic003G126600 Sobic001G322000--Sobic003G126600 SobicK004100 SobicK004100 Sobic001G322000--SobicK004100 Sobic004G057100 Sobic004G057100 Sobic001G322000--Sobic004G057100 Sobic007G203500 Sobic007G203500 Sobic001G322000--Sobic007G203500 Sobic007G120800 Sobic007G120800 Sobic002G408800--Sobic007G120800 Sobic003G029600 Sobic003G029600 Sobic002G408800--Sobic003G029600 Sobic002G029300 Sobic002G029300 Sobic002G408800--Sobic002G029300 Sobic009G049400 Sobic009G049400 Sobic002G408800--Sobic009G049400 Sobic005G074100 Sobic005G074100 Sobic002G408800--Sobic005G074100 Sobic002G408800--Sobic001G322000 Sobic006G056200 Sobic006G056200 Sobic002G408800--Sobic006G056200 Sobic009G231700 Sobic009G231700 Sobic002G408800--Sobic009G231700 Sobic010G216000 Sobic010G216000 Sobic002G408800--Sobic010G216000 Sobic006G034800 Sobic006G034800 Sobic003G400100--Sobic006G034800 Sobic003G400100--Sobic001G261456 Sobic002G131900 Sobic002G131900 Sobic003G400100--Sobic002G131900 Sobic002G313500 Sobic002G313500 Sobic003G400100--Sobic002G313500 Sobic010G105600 Sobic010G105600 Sobic003G400100--Sobic010G105600 Sobic001G067900 Sobic001G067900 Sobic003G400100--Sobic001G067900 Sobic009G226400 Sobic009G226400 Sobic003G400100--Sobic009G226400 Sobic001G371200 Sobic001G371200 Sobic003G400100--Sobic001G371200 Sobic010G017800 Sobic010G017800 Sobic003G400100--Sobic010G017800 Sobic001G338400 Sobic001G338400 Sobic002G342500--Sobic001G338400 Sobic002G342500--Sobic005G074100 Sobic001G145500 Sobic001G145500 Sobic002G342500--Sobic001G145500 Sobic003G348800 Sobic003G348800 Sobic002G342500--Sobic003G348800 Sobic002G342500--Sobic001G322000 Sobic006G179700 Sobic006G179700 Sobic002G342500--Sobic006G179700 Sobic007G013300 Sobic007G013300 Sobic002G342500--Sobic007G013300 Sobic007G161200 Sobic007G161200 Sobic002G342500--Sobic007G161200 Sobic003G053700 Sobic003G053700 Sobic002G342500--Sobic003G053700 Sobic004G039600 Sobic004G039600 Sobic001G261456--Sobic004G039600 Sobic001G094900 Sobic001G094900 Sobic001G261456--Sobic001G094900 Sobic008G092300 Sobic008G092300 Sobic001G261456--Sobic008G092300 Sobic001G124200 Sobic001G124200 Sobic001G261456--Sobic001G124200 Sobic009G219000 Sobic009G219000 Sobic001G261456--Sobic009G219000 Sobic001G261456--Sobic001G371200 Sobic001G261456--Sobic003G400100 Sobic001G281600 Sobic001G281600 Sobic001G261456--Sobic001G281600 Sobic001G143500 Sobic001G143500 Sobic001G261456--Sobic001G143500 Sobic006G202200 Sobic006G202200 Sobic009G214900--Sobic006G202200 Sobic009G214900--Sobic009G049400 Sobic009G229600 Sobic009G229600 Sobic009G214900--Sobic009G229600 Sobic003G187200 Sobic003G187200 Sobic009G214900--Sobic003G187200 Sobic007G125000 Sobic007G125000 Sobic009G214900--Sobic007G125000 Sobic006G163800 Sobic006G163800 Sobic009G214900--Sobic006G163800 Sobic009G126600 Sobic009G126600 Sobic009G214900--Sobic009G126600 Sobic010G185400 Sobic010G185400 Sobic009G214900--Sobic010G185400 Sobic009G170400 Sobic009G170400 Sobic009G214900--Sobic009G170400 Sobic003G126600--Sobic004G039600 Sobic003G249600 Sobic003G249600 Sobic003G126600--Sobic003G249600 Sobic003G126600--Sobic009G229600 Sobic003G187500 Sobic003G187500 Sobic003G126600--Sobic003G187500 Sobic010G053800 Sobic010G053800 Sobic003G126600--Sobic010G053800 Sobic001G518400 Sobic001G518400 Sobic003G126600--Sobic001G518400 Sobic001G369000 Sobic001G369000 Sobic003G126600--Sobic001G369000 Sobic003G126600--Sobic003G187200 Sobic004G072100 Sobic004G072100 Sobic003G126600--Sobic004G072100 SobicK004100--Sobic001G369000 SobicK004100--Sobic004G039600 Sobic003G099300 Sobic003G099300 SobicK004100--Sobic003G099300 Sobic001G335900 Sobic001G335900 SobicK004100--Sobic001G335900 Sobic007G120500 Sobic007G120500 SobicK004100--Sobic007G120500 SobicK004100--Sobic009G049400 Sobic003G240700 Sobic003G240700 SobicK004100--Sobic003G240700 SobicK004100--Sobic009G226400 Sobic001G449900 Sobic001G449900 SobicK004100--Sobic001G449900 Sobic004G057100--SobicK004100 Sobic004G326600 Sobic004G326600 Sobic004G057100--Sobic004G326600 Sobic001G460500 Sobic001G460500 Sobic004G057100--Sobic001G460500 Sobic001G168900 Sobic001G168900 Sobic004G057100--Sobic001G168900 Sobic001G527300 Sobic001G527300 Sobic004G057100--Sobic001G527300 Sobic005G163700 Sobic005G163700 Sobic004G057100--Sobic005G163700 Sobic010G099800 Sobic010G099800 Sobic004G057100--Sobic010G099800 Sobic005G115500 Sobic005G115500 Sobic004G057100--Sobic005G115500 Sobic004G057100--Sobic003G099300 Sobic007G203500--Sobic010G017800 Sobic007G203500--Sobic003G126600 Sobic003G401000 Sobic003G401000 Sobic007G203500--Sobic003G401000 Sobic006G052500 Sobic006G052500 Sobic007G203500--Sobic006G052500 Sobic001G539016 Sobic001G539016 Sobic007G203500--Sobic001G539016 Sobic003G313400 Sobic003G313400 Sobic007G203500--Sobic003G313400 Sobic009G257800 Sobic009G257800 Sobic007G203500--Sobic009G257800 Sobic007G203500--Sobic009G229600 Sobic010G106900 Sobic010G106900 Sobic007G203500--Sobic010G106900
Octagon: transcription factors


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