Gene annotation
Transcriptome id Sobic.005G074100.1
Synonym EMB2756, Sb05g006130
Functional annotation hydrolase, acting on carbon-nitrogen, putative, expressed
UniProt C5Y734
Pfam PF04765
Panther DB PTHR12956 PTHR12956:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G34550 : Protein of unknown function (DUF616)
RAP-DB (Rice) LOC_Os11g09170.1 : hydrolase, acting on carbon-nitrogen, putative, expressed
MaizeGDB (Corn) Zm00025a015618 , Zm00025a029601
Brachypodium PNT63982 , KQJ89041 , KQJ89040
Barley HORVU4Hr1G043890.1 , HORVU4Hr1G043890.2
Wheat TraesCS4D02G098200 , TraesCS4B02G101600 , TraesCS4A02G214400
Populus -


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cDNA sequences
Sobic.005G074100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G013300 protein kinase family protein, putative, expressed -
2 Sobic.002G342500 glycosyltransferase sugar-binding region containing DXD motif, putative, expressed -
3 Sobic.001G145500 trafficking protein particle complex subunit 1, putative, expressed -
4 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
5 Sobic.002G408800 protein kinase family protein, putative, expressed K08819: cyclin-dependent kinase 12/13
6 Sobic.004G082900 26S protease regulatory subunit, putative, expressed K03064: PSMC6, 26S proteasome regulatory subunit T4
7 Sobic.002G020700 WD domain, G-beta repeat domain containing protein, expressed K14018: PLAA, DOA1, phospholipase A-2-activating protein
8 Sobic.001G169100 transporter, major facilitator family, putative, expressed -
9 Sobic.004G010900 OsFBK2 - F-box domain and kelch repeat containing protein, expressed -
10 Sobic.003G029600 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
11 Sobic.008G085700 exocyst complex component 5, putative, expressed -
12 Sobic.002G029300 pleckstrin homology domain-containing protein, putative, expressed -
13 Sobic.001G449900 conserved oligomeric complex COG6 family protein, expressed -
14 Sobic.008G072200 coatomer subunit delta, putative, expressed -
15 Sobic.K004100 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.003G099300 expressed protein K18749: LSM14, RAP55, protein LSM14
17 Sobic.001G322000 pollen ankyrin, putative, expressed K19044: E3 ubiquitin-protein ligase XBAT32/33
18 Sobic.002G070600 coatomer subunit gamma-2, putative, expressed K17267: coatomer subunit gamma
19 Sobic.003G400100 leaf senescence related protein, putative, expressed -
20 Sobic.001G426100 enolase, putative, expressed K01689: ENO, enolase


Gene co-expression network
sample Sobic005G074100 Sobic005G074100 Sobic007G013300 Sobic007G013300 Sobic005G074100--Sobic007G013300 Sobic002G342500 Sobic002G342500 Sobic005G074100--Sobic002G342500 Sobic001G145500 Sobic001G145500 Sobic005G074100--Sobic001G145500 Sobic001G338400 Sobic001G338400 Sobic005G074100--Sobic001G338400 Sobic002G408800 Sobic002G408800 Sobic005G074100--Sobic002G408800 Sobic004G082900 Sobic004G082900 Sobic005G074100--Sobic004G082900 Sobic002G020700 Sobic002G020700 Sobic005G074100--Sobic002G020700 Sobic001G169100 Sobic001G169100 Sobic005G074100--Sobic001G169100 Sobic004G010900 Sobic004G010900 Sobic005G074100--Sobic004G010900 Sobic007G013300--Sobic005G074100 Sobic001G206900 Sobic001G206900 Sobic007G013300--Sobic001G206900 Sobic007G013300--Sobic001G145500 Sobic002G058700 Sobic002G058700 Sobic007G013300--Sobic002G058700 Sobic003G299000 Sobic003G299000 Sobic007G013300--Sobic003G299000 Sobic007G013300--Sobic004G010900 Sobic009G149500 Sobic009G149500 Sobic007G013300--Sobic009G149500 Sobic007G013300--Sobic004G082900 Sobic007G013300--Sobic002G342500 Sobic002G342500--Sobic001G338400 Sobic002G342500--Sobic005G074100 Sobic002G342500--Sobic001G145500 Sobic003G348800 Sobic003G348800 Sobic002G342500--Sobic003G348800 Sobic001G322000 Sobic001G322000 Sobic002G342500--Sobic001G322000 Sobic006G179700 Sobic006G179700 Sobic002G342500--Sobic006G179700 Sobic002G342500--Sobic007G013300 Sobic007G161200 Sobic007G161200 Sobic002G342500--Sobic007G161200 Sobic003G053700 Sobic003G053700 Sobic002G342500--Sobic003G053700 Sobic001G444300 Sobic001G444300 Sobic001G145500--Sobic001G444300 Sobic005G105500 Sobic005G105500 Sobic001G145500--Sobic005G105500 Sobic001G145500--Sobic001G338400 Sobic001G281900 Sobic001G281900 Sobic001G145500--Sobic001G281900 Sobic007G176200 Sobic007G176200 Sobic001G145500--Sobic007G176200 Sobic001G145500--Sobic004G010900 Sobic006G252200 Sobic006G252200 Sobic001G145500--Sobic006G252200 Sobic003G330500 Sobic003G330500 Sobic001G145500--Sobic003G330500 Sobic002G029300 Sobic002G029300 Sobic001G145500--Sobic002G029300 Sobic001G338400--Sobic003G348800 Sobic008G150300 Sobic008G150300 Sobic001G338400--Sobic008G150300 Sobic001G338400--Sobic001G281900 Sobic001G338400--Sobic001G145500 Sobic001G338400--Sobic004G010900 Sobic001G490500 Sobic001G490500 Sobic001G338400--Sobic001G490500 Sobic001G230100 Sobic001G230100 Sobic001G338400--Sobic001G230100 Sobic001G338400--Sobic002G342500 Sobic006G029000 Sobic006G029000 Sobic001G338400--Sobic006G029000 Sobic007G120800 Sobic007G120800 Sobic002G408800--Sobic007G120800 Sobic003G029600 Sobic003G029600 Sobic002G408800--Sobic003G029600 Sobic002G408800--Sobic002G029300 Sobic009G049400 Sobic009G049400 Sobic002G408800--Sobic009G049400 Sobic002G408800--Sobic005G074100 Sobic002G408800--Sobic001G322000 Sobic006G056200 Sobic006G056200 Sobic002G408800--Sobic006G056200 Sobic009G231700 Sobic009G231700 Sobic002G408800--Sobic009G231700 Sobic010G216000 Sobic010G216000 Sobic002G408800--Sobic010G216000 Sobic004G082900--Sobic006G252200 Sobic001G283200 Sobic001G283200 Sobic004G082900--Sobic001G283200 Sobic001G458700 Sobic001G458700 Sobic004G082900--Sobic001G458700 Sobic004G082900--Sobic004G010900 Sobic004G082900--Sobic007G176200 Sobic004G082900--Sobic005G105500 Sobic004G082900--Sobic001G145500 Sobic004G082900--Sobic009G149500 Sobic004G082900--Sobic001G444300 Sobic010G020400 Sobic010G020400 Sobic002G020700--Sobic010G020400 Sobic008G085700 Sobic008G085700 Sobic002G020700--Sobic008G085700 Sobic008G055900 Sobic008G055900 Sobic002G020700--Sobic008G055900 Sobic001G333100 Sobic001G333100 Sobic002G020700--Sobic001G333100 Sobic010G223300 Sobic010G223300 Sobic002G020700--Sobic010G223300 Sobic001G449900 Sobic001G449900 Sobic002G020700--Sobic001G449900 Sobic004G039600 Sobic004G039600 Sobic002G020700--Sobic004G039600 Sobic008G082500 Sobic008G082500 Sobic002G020700--Sobic008G082500 Sobic007G054800 Sobic007G054800 Sobic002G020700--Sobic007G054800 Sobic001G169100--Sobic009G149500 Sobic001G169100--Sobic002G020700 Sobic001G169100--Sobic008G085700 Sobic001G049400 Sobic001G049400 Sobic001G169100--Sobic001G049400 Sobic002G070600 Sobic002G070600 Sobic001G169100--Sobic002G070600 Sobic003G261800 Sobic003G261800 Sobic001G169100--Sobic003G261800 Sobic001G358500 Sobic001G358500 Sobic001G169100--Sobic001G358500 Sobic001G169100--Sobic010G020400 Sobic005G018800 Sobic005G018800 Sobic001G169100--Sobic005G018800 Sobic004G010900--Sobic001G206900 Sobic004G010900--Sobic001G458700 Sobic004G010900--Sobic004G082900 Sobic004G010900--Sobic006G252200 Sobic010G205300 Sobic010G205300 Sobic004G010900--Sobic010G205300 Sobic003G261400 Sobic003G261400 Sobic004G010900--Sobic003G261400 Sobic004G010900--Sobic001G338400 Sobic004G010900--Sobic001G283200 Sobic003G349300 Sobic003G349300 Sobic004G010900--Sobic003G349300
Octagon: transcription factors


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