Gene annotation
Transcriptome id Sobic.002G408800.1
Synonym Sb02g042260
Functional annotation protein kinase family protein, putative, expressed
UniProt A0A1B6QG67
Pfam PF07714
Panther DB PTHR24056 PTHR24056:SF219
NCBI CDD -
KEGG Orthology K08819; cyclin-dependent kinase 12/13
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G54610 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os07g47180.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a004579 , Zm00025a049083 , Zm00025a002450 , Zm00025a025382 , Zm00025a052383 , Zm00025a015384 , Zm00025a004331
Brachypodium KQK14763 , KQK14762 , KQK21688 , KQK21687
Barley HORVU4Hr1G048510.1 , HORVU4Hr1G048510.2 , HORVU4Hr1G048510.3 , HORVU4Hr1G048510.4 , HORVU4Hr1G048510.5 , HORVU2Hr1G020680.4 , HORVU2Hr1G020680.1 , HORVU2Hr1G020680.2 , HORVU2Hr1G020680.3
Wheat TraesCS2B02G139000 , TraesCS4B02G151800 , TraesCS4D02G151100 , TraesCS2A02G119300 , TraesCS4A02G142300 , TraesCS2D02G120200
Populus -


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cDNA sequences
Sobic.002G408800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G120800 puromycin-sensitive aminopeptidase, putative, expressed K08776: puromycin-sensitive aminopeptidase
2 Sobic.003G029600 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
3 Sobic.002G029300 pleckstrin homology domain-containing protein, putative, expressed -
4 Sobic.009G049400 "SRS3(Ortholog in rice:Kitagawa et al., 2010)"(PubMedID : 31659920)@ATKINESIN-13A/KINESIN-13A, putative, expressed K10393: KIF2_24, kinesin family member 2/24
5 Sobic.005G074100 hydrolase, acting on carbon-nitrogen, putative, expressed -
6 Sobic.001G322000 pollen ankyrin, putative, expressed K19044: E3 ubiquitin-protein ligase XBAT32/33
7 Sobic.006G056200 transport protein particle component, Bet3, domain containing protein, expressed -
8 Sobic.009G231700 GTP binding protein, putative, expressed -
9 Sobic.010G216000 villin protein, putative, expressed K05768: gelsolin
10 Sobic.003G240700 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed -
11 Sobic.001G145500 trafficking protein particle complex subunit 1, putative, expressed -
12 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
13 Sobic.003G293000 expressed protein -
14 Sobic.K004100 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.002G306700 expressed protein -
16 Sobic.010G269100 zinc finger family protein, putative, expressed -
17 Sobic.009G120500 golgi transport complex protein-related, putative, expressed -
18 Sobic.003G227100 adaptin, putative, expressed -
19 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
20 Sobic.003G314700 expressed protein -


Gene co-expression network
sample Sobic002G408800 Sobic002G408800 Sobic007G120800 Sobic007G120800 Sobic002G408800--Sobic007G120800 Sobic003G029600 Sobic003G029600 Sobic002G408800--Sobic003G029600 Sobic002G029300 Sobic002G029300 Sobic002G408800--Sobic002G029300 Sobic009G049400 Sobic009G049400 Sobic002G408800--Sobic009G049400 Sobic005G074100 Sobic005G074100 Sobic002G408800--Sobic005G074100 Sobic001G322000 Sobic001G322000 Sobic002G408800--Sobic001G322000 Sobic006G056200 Sobic006G056200 Sobic002G408800--Sobic006G056200 Sobic009G231700 Sobic009G231700 Sobic002G408800--Sobic009G231700 Sobic010G216000 Sobic010G216000 Sobic002G408800--Sobic010G216000 Sobic007G120800--Sobic002G408800 Sobic007G120800--Sobic002G029300 Sobic002G194800 Sobic002G194800 Sobic007G120800--Sobic002G194800 Sobic007G120800--Sobic006G056200 Sobic008G156300 Sobic008G156300 Sobic007G120800--Sobic008G156300 Sobic007G173700 Sobic007G173700 Sobic007G120800--Sobic007G173700 Sobic001G161700 Sobic001G161700 Sobic007G120800--Sobic001G161700 Sobic006G259401 Sobic006G259401 Sobic007G120800--Sobic006G259401 Sobic007G065500 Sobic007G065500 Sobic007G120800--Sobic007G065500 Sobic001G117800 Sobic001G117800 Sobic003G029600--Sobic001G117800 Sobic003G314700 Sobic003G314700 Sobic003G029600--Sobic003G314700 Sobic002G070600 Sobic002G070600 Sobic003G029600--Sobic002G070600 Sobic002G340900 Sobic002G340900 Sobic003G029600--Sobic002G340900 Sobic001G301200 Sobic001G301200 Sobic003G029600--Sobic001G301200 Sobic001G449900 Sobic001G449900 Sobic003G029600--Sobic001G449900 Sobic008G124800 Sobic008G124800 Sobic003G029600--Sobic008G124800 Sobic009G118900 Sobic009G118900 Sobic003G029600--Sobic009G118900 Sobic001G437400 Sobic001G437400 Sobic003G029600--Sobic001G437400 Sobic001G023100 Sobic001G023100 Sobic002G029300--Sobic001G023100 Sobic002G029300--Sobic007G173700 Sobic004G031800 Sobic004G031800 Sobic002G029300--Sobic004G031800 Sobic008G072200 Sobic008G072200 Sobic002G029300--Sobic008G072200 Sobic001G010700 Sobic001G010700 Sobic002G029300--Sobic001G010700 Sobic009G226400 Sobic009G226400 Sobic002G029300--Sobic009G226400 Sobic002G029300--Sobic001G161700 Sobic002G141700 Sobic002G141700 Sobic002G029300--Sobic002G141700 Sobic002G029300--Sobic006G056200 Sobic001G369000 Sobic001G369000 Sobic009G049400--Sobic001G369000 Sobic009G229600 Sobic009G229600 Sobic009G049400--Sobic009G229600 Sobic001G426600 Sobic001G426600 Sobic009G049400--Sobic001G426600 Sobic003G394200 Sobic003G394200 Sobic009G049400--Sobic003G394200 Sobic001G335900 Sobic001G335900 Sobic009G049400--Sobic001G335900 Sobic006G163800 Sobic006G163800 Sobic009G049400--Sobic006G163800 Sobic003G189600 Sobic003G189600 Sobic009G049400--Sobic003G189600 Sobic004G039600 Sobic004G039600 Sobic009G049400--Sobic004G039600 Sobic003G240700 Sobic003G240700 Sobic009G049400--Sobic003G240700 Sobic007G013300 Sobic007G013300 Sobic005G074100--Sobic007G013300 Sobic002G342500 Sobic002G342500 Sobic005G074100--Sobic002G342500 Sobic001G145500 Sobic001G145500 Sobic005G074100--Sobic001G145500 Sobic001G338400 Sobic001G338400 Sobic005G074100--Sobic001G338400 Sobic005G074100--Sobic002G408800 Sobic004G082900 Sobic004G082900 Sobic005G074100--Sobic004G082900 Sobic002G020700 Sobic002G020700 Sobic005G074100--Sobic002G020700 Sobic001G169100 Sobic001G169100 Sobic005G074100--Sobic001G169100 Sobic004G010900 Sobic004G010900 Sobic005G074100--Sobic004G010900 Sobic001G322000--Sobic002G408800 Sobic003G400100 Sobic003G400100 Sobic001G322000--Sobic003G400100 Sobic001G322000--Sobic002G342500 Sobic001G261456 Sobic001G261456 Sobic001G322000--Sobic001G261456 Sobic009G214900 Sobic009G214900 Sobic001G322000--Sobic009G214900 Sobic003G126600 Sobic003G126600 Sobic001G322000--Sobic003G126600 SobicK004100 SobicK004100 Sobic001G322000--SobicK004100 Sobic004G057100 Sobic004G057100 Sobic001G322000--Sobic004G057100 Sobic007G203500 Sobic007G203500 Sobic001G322000--Sobic007G203500 Sobic006G056200--Sobic004G039600 Sobic008G055900 Sobic008G055900 Sobic006G056200--Sobic008G055900 Sobic008G129600 Sobic008G129600 Sobic006G056200--Sobic008G129600 Sobic003G099300 Sobic003G099300 Sobic006G056200--Sobic003G099300 Sobic006G056200--Sobic009G226400 Sobic008G103300 Sobic008G103300 Sobic006G056200--Sobic008G103300 Sobic006G056200--Sobic001G369000 Sobic006G056200--SobicK004100 Sobic006G056200--Sobic002G029300 Sobic009G231700--Sobic002G020700 Sobic009G231700--Sobic003G099300 Sobic007G177300 Sobic007G177300 Sobic009G231700--Sobic007G177300 Sobic002G423500 Sobic002G423500 Sobic009G231700--Sobic002G423500 Sobic009G231700--SobicK004100 Sobic009G231700--Sobic004G039600 Sobic001G382600 Sobic001G382600 Sobic009G231700--Sobic001G382600 Sobic001G118200 Sobic001G118200 Sobic009G231700--Sobic001G118200 Sobic010G269100 Sobic010G269100 Sobic009G231700--Sobic010G269100 Sobic004G034300 Sobic004G034300 Sobic010G216000--Sobic004G034300 Sobic010G178600 Sobic010G178600 Sobic010G216000--Sobic010G178600 Sobic010G216000--Sobic002G408800 Sobic003G346400 Sobic003G346400 Sobic010G216000--Sobic003G346400 Sobic010G216000--Sobic001G161700 Sobic001G012900 Sobic001G012900 Sobic010G216000--Sobic001G012900 Sobic010G216000--Sobic002G070600 Sobic003G348800 Sobic003G348800 Sobic010G216000--Sobic003G348800 Sobic010G216000--Sobic002G029300
Octagon: transcription factors


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