Gene annotation
Transcriptome id Sobic.010G216000.4,Sobic.010G216000.2,Sobic.010G216000.3,Sobic.010G216000.1
Synonym Sb10g026230, VLN4, ATVLN4
Functional annotation villin protein, putative, expressed
UniProt A0A194YKQ6 , A0A194YKM2 , A0A194YLS4 , A0A194YLQ6
Pfam PF02209 PF00626
Panther DB PTHR11977 PTHR11977:SF47
NCBI CDD -
KEGG Orthology K05768; gelsolin
Gene Ontology GO:0007010; cytoskeleton organization GO:0003779actin binding


Orthologs (automatic annotation)
TAIR AT4G30160 : villin 4
RAP-DB (Rice) LOC_Os06g44890.1 : villin protein, putative, expressed
MaizeGDB (Corn) Zm00025a051681
Brachypodium KQK16920 , PNT75387 , PNT75386 , KQK16918 , KQK16919 , KQK16917
Barley HORVU2Hr1G101190.3 , HORVU3Hr1G113850.20 , HORVU3Hr1G113850.21 , HORVU3Hr1G113850.22 , HORVU3Hr1G113850.23 , HORVU3Hr1G113850.15 , HORVU3Hr1G113850.14 , HORVU3Hr1G113850.17 , HORVU3Hr1G113850.16 , HORVU3Hr1G113850.11 , HORVU3Hr1G113850.10 , HORVU3Hr1G113850.13 , HORVU3Hr1G113850.12 , HORVU3Hr1G113850.19 , HORVU3Hr1G113850.18 , HORVU7Hr1G110830.2 , HORVU7Hr1G110830.3 , HORVU7Hr1G110830.1 , HORVU7Hr1G110830.6 , HORVU7Hr1G110830.4 , HORVU7Hr1G110830.5 , HORVU2Hr1G101190.8 , HORVU2Hr1G101190.9 , HORVU2Hr1G101190.6 , HORVU2Hr1G101190.7 , HORVU2Hr1G101190.4 , HORVU2Hr1G101190.5 , HORVU2Hr1G101190.2 , HORVU2Hr1G101190.1 , HORVU3Hr1G113850.1 , HORVU3Hr1G113850.3 , HORVU3Hr1G113850.2 , HORVU3Hr1G113850.5 , HORVU3Hr1G113850.4 , HORVU3Hr1G113850.6 , HORVU3Hr1G113850.9 , HORVU3Hr1G113850.8 , HORVU2Hr1G101190.10 , HORVU2Hr1G101190.11 , HORVU2Hr1G101190.12 , HORVU2Hr1G101190.13 , HORVU3Hr1G113850.7
Wheat TraesCS3D02G528200 , TraesCS3D02G528200 , TraesCS3D02G528200 , TraesCS3D02G528200 , TraesCS3D02G528200 , TraesCS3D02G528200 , TraesCS3D02G528200 , TraesCS7A02G494200 , TraesCS7A02G494200 , TraesCS7B02G403700 , TraesCS7D02G481400 , TraesCS3B02G590400 , TraesCS3B02G590400 , TraesCS3B02G590400 , TraesCS3A02G520900 , TraesCS3A02G520900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G034300 transducin family protein, putative, expressed -
2 Sobic.010G178600 coatomer subunit beta, putative, expressed K17302: COPB2, coatomer subunit beta'
3 Sobic.002G408800 protein kinase family protein, putative, expressed K08819: cyclin-dependent kinase 12/13
4 Sobic.003G346400 vacuolar ATP synthase 98 kDa subunit, putative, expressed K02154: ATPeV0A, V-type H+-transporting ATPase subunit a
5 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
6 Sobic.001G012900 brefeldin A-sensitive Golgi protein-like, putative, expressed -
7 Sobic.002G070600 coatomer subunit gamma-2, putative, expressed K17267: coatomer subunit gamma
8 Sobic.003G348800 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
9 Sobic.002G029300 pleckstrin homology domain-containing protein, putative, expressed -
10 Sobic.004G212100 PPR repeat domain containing protein, putative, expressed -
11 Sobic.008G072200 coatomer subunit delta, putative, expressed -
12 Sobic.003G293000 expressed protein -
13 Sobic.007G120800 puromycin-sensitive aminopeptidase, putative, expressed K08776: puromycin-sensitive aminopeptidase
14 Sobic.009G118900 expressed protein -
15 Sobic.004G031800 expressed protein -
16 Sobic.002G342500 glycosyltransferase sugar-binding region containing DXD motif, putative, expressed -
17 Sobic.003G023300 Alg9-like mannosyltransferase protein, putative, expressed K03846: alpha-1,2-mannosyltransferase
18 Sobic.001G116000 dynamin family protein, putative, expressed K01528: dynamin 1/3
19 Sobic.004G207900 nucleotide-sugar transporter family protein, putative, expressed -
20 Sobic.001G023100 ACBP4, putative, expressed -


Gene co-expression network
sample Sobic010G216000 Sobic010G216000 Sobic004G034300 Sobic004G034300 Sobic010G216000--Sobic004G034300 Sobic010G178600 Sobic010G178600 Sobic010G216000--Sobic010G178600 Sobic002G408800 Sobic002G408800 Sobic010G216000--Sobic002G408800 Sobic003G346400 Sobic003G346400 Sobic010G216000--Sobic003G346400 Sobic001G161700 Sobic001G161700 Sobic010G216000--Sobic001G161700 Sobic001G012900 Sobic001G012900 Sobic010G216000--Sobic001G012900 Sobic002G070600 Sobic002G070600 Sobic010G216000--Sobic002G070600 Sobic003G348800 Sobic003G348800 Sobic010G216000--Sobic003G348800 Sobic002G029300 Sobic002G029300 Sobic010G216000--Sobic002G029300 Sobic004G336300 Sobic004G336300 Sobic004G034300--Sobic004G336300 Sobic004G034300--Sobic010G178600 Sobic004G034300--Sobic002G070600 Sobic008G072200 Sobic008G072200 Sobic004G034300--Sobic008G072200 Sobic005G059500 Sobic005G059500 Sobic004G034300--Sobic005G059500 Sobic009G118900 Sobic009G118900 Sobic004G034300--Sobic009G118900 Sobic003G334700 Sobic003G334700 Sobic004G034300--Sobic003G334700 Sobic004G212100 Sobic004G212100 Sobic004G034300--Sobic004G212100 Sobic004G034300--Sobic001G012900 Sobic004G174700 Sobic004G174700 Sobic010G178600--Sobic004G174700 Sobic010G178600--Sobic009G118900 Sobic010G178600--Sobic004G034300 Sobic010G178600--Sobic002G070600 Sobic010G178600--Sobic008G072200 Sobic003G134800 Sobic003G134800 Sobic010G178600--Sobic003G134800 Sobic010G178600--Sobic004G336300 Sobic001G117800 Sobic001G117800 Sobic010G178600--Sobic001G117800 Sobic003G029600 Sobic003G029600 Sobic010G178600--Sobic003G029600 Sobic007G120800 Sobic007G120800 Sobic002G408800--Sobic007G120800 Sobic002G408800--Sobic003G029600 Sobic002G408800--Sobic002G029300 Sobic009G049400 Sobic009G049400 Sobic002G408800--Sobic009G049400 Sobic005G074100 Sobic005G074100 Sobic002G408800--Sobic005G074100 Sobic001G322000 Sobic001G322000 Sobic002G408800--Sobic001G322000 Sobic006G056200 Sobic006G056200 Sobic002G408800--Sobic006G056200 Sobic009G231700 Sobic009G231700 Sobic002G408800--Sobic009G231700 Sobic002G408800--Sobic010G216000 Sobic004G254800 Sobic004G254800 Sobic003G346400--Sobic004G254800 Sobic006G021700 Sobic006G021700 Sobic003G346400--Sobic006G021700 Sobic004G060300 Sobic004G060300 Sobic003G346400--Sobic004G060300 Sobic003G394200 Sobic003G394200 Sobic003G346400--Sobic003G394200 Sobic006G203300 Sobic006G203300 Sobic003G346400--Sobic006G203300 Sobic001G445500 Sobic001G445500 Sobic003G346400--Sobic001G445500 Sobic003G209200 Sobic003G209200 Sobic003G346400--Sobic003G209200 Sobic003G346400--Sobic001G161700 Sobic003G346400--Sobic001G012900 Sobic001G161700--Sobic002G070600 Sobic001G161700--Sobic008G072200 Sobic001G490500 Sobic001G490500 Sobic001G161700--Sobic001G490500 Sobic001G161700--Sobic001G012900 Sobic001G023100 Sobic001G023100 Sobic001G161700--Sobic001G023100 Sobic001G161700--Sobic003G346400 Sobic004G000100 Sobic004G000100 Sobic001G161700--Sobic004G000100 Sobic001G161700--Sobic004G254800 Sobic008G085700 Sobic008G085700 Sobic001G161700--Sobic008G085700 Sobic003G293000 Sobic003G293000 Sobic001G012900--Sobic003G293000 Sobic001G193100 Sobic001G193100 Sobic001G012900--Sobic001G193100 Sobic001G012900--Sobic005G059500 Sobic001G012900--Sobic001G161700 Sobic001G012900--Sobic004G060300 Sobic010G223400 Sobic010G223400 Sobic001G012900--Sobic010G223400 Sobic001G012900--Sobic003G346400 Sobic001G335000 Sobic001G335000 Sobic001G012900--Sobic001G335000 Sobic009G122500 Sobic009G122500 Sobic001G012900--Sobic009G122500 Sobic002G070600--Sobic008G072200 Sobic002G070600--Sobic001G117800 Sobic002G070600--Sobic001G161700 Sobic002G070600--Sobic008G085700 Sobic002G070600--Sobic004G336300 Sobic002G070600--Sobic003G029600 Sobic002G070600--Sobic006G021700 Sobic002G070600--Sobic009G118900 Sobic002G070600--Sobic010G178600 Sobic001G338400 Sobic001G338400 Sobic003G348800--Sobic001G338400 Sobic001G281900 Sobic001G281900 Sobic003G348800--Sobic001G281900 Sobic002G342500 Sobic002G342500 Sobic003G348800--Sobic002G342500 Sobic001G230100 Sobic001G230100 Sobic003G348800--Sobic001G230100 Sobic001G220900 Sobic001G220900 Sobic003G348800--Sobic001G220900 Sobic004G160200 Sobic004G160200 Sobic003G348800--Sobic004G160200 Sobic001G109300 Sobic001G109300 Sobic003G348800--Sobic001G109300 Sobic004G257000 Sobic004G257000 Sobic003G348800--Sobic004G257000 Sobic008G150300 Sobic008G150300 Sobic003G348800--Sobic008G150300 Sobic002G029300--Sobic001G023100 Sobic007G173700 Sobic007G173700 Sobic002G029300--Sobic007G173700 Sobic004G031800 Sobic004G031800 Sobic002G029300--Sobic004G031800 Sobic002G029300--Sobic008G072200 Sobic001G010700 Sobic001G010700 Sobic002G029300--Sobic001G010700 Sobic009G226400 Sobic009G226400 Sobic002G029300--Sobic009G226400 Sobic002G029300--Sobic001G161700 Sobic002G141700 Sobic002G141700 Sobic002G029300--Sobic002G141700 Sobic002G029300--Sobic006G056200
Octagon: transcription factors


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