Gene annotation
Transcriptome id Sobic.003G293000.1
Synonym Sb03g034350, GC1
Functional annotation expressed protein
UniProt C5XK11
Pfam -
Panther DB PTHR13815 PTHR13815:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G19950 : golgin candidate 1
RAP-DB (Rice) LOC_Os01g54119.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a040060 , Zm00025a027628 , Zm00025a027633
Brachypodium KQK09698 , KQK09641
Barley HORVU3Hr1G070960.14 , HORVU3Hr1G070960.11 , HORVU3Hr1G070960.10 , HORVU3Hr1G070960.13 , HORVU3Hr1G070960.12 , HORVU3Hr1G070960.1 , HORVU3Hr1G070960.3 , HORVU3Hr1G070960.2 , HORVU3Hr1G070960.5 , HORVU3Hr1G070960.4 , HORVU3Hr1G070960.7 , HORVU3Hr1G070960.6 , HORVU3Hr1G070960.9 , HORVU3Hr1G070960.8
Wheat TraesCS3A02G275000 , TraesCS3B02G308700 , TraesCS3D02G274900 , TraesCS3D02G274900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G240700 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed -
2 Sobic.001G012900 brefeldin A-sensitive Golgi protein-like, putative, expressed -
3 Sobic.009G049400 "SRS3(Ortholog in rice:Kitagawa et al., 2010)"(PubMedID : 31659920)@ATKINESIN-13A/KINESIN-13A, putative, expressed K10393: KIF2_24, kinesin family member 2/24
4 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
5 Sobic.003G005900 abscisic acid insensitive 8, putative, expressed -
6 Sobic.003G334700 HEAT, putative, expressed K16803: CKAP5, cytoskeleton-associated protein 5
7 Sobic.005G059500 expressed protein -
8 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
9 Sobic.003G314700 expressed protein -
10 Sobic.001G369000 adapitin protein, putative, expressed K12392: AP-1 complex subunit beta-1
11 Sobic.002G070600 coatomer subunit gamma-2, putative, expressed K17267: coatomer subunit gamma
12 Sobic.K004100 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.009G229600 tRNA-binding arm, putative, expressed -
14 Sobic.005G114500 growth regulator related protein, putative, expressed -
15 Sobic.008G072200 coatomer subunit delta, putative, expressed -
16 Sobic.003G029600 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
17 Sobic.001G117800 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
18 Sobic.010G223400 expressed protein -
19 Sobic.001G437400 guanine nucleotide exchange family protein, putative, expressed K18442: ARFGEF, brefeldin A-inhibited guanine nucleotide-exchange protein
20 Sobic.004G336300 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1


Gene co-expression network
sample Sobic003G293000 Sobic003G293000 Sobic003G240700 Sobic003G240700 Sobic003G293000--Sobic003G240700 Sobic001G012900 Sobic001G012900 Sobic003G293000--Sobic001G012900 Sobic009G049400 Sobic009G049400 Sobic003G293000--Sobic009G049400 Sobic001G335900 Sobic001G335900 Sobic003G293000--Sobic001G335900 Sobic003G005900 Sobic003G005900 Sobic003G293000--Sobic003G005900 Sobic003G334700 Sobic003G334700 Sobic003G293000--Sobic003G334700 Sobic005G059500 Sobic005G059500 Sobic003G293000--Sobic005G059500 Sobic001G474400 Sobic001G474400 Sobic003G293000--Sobic001G474400 Sobic003G314700 Sobic003G314700 Sobic003G293000--Sobic003G314700 Sobic001G369000 Sobic001G369000 Sobic003G240700--Sobic001G369000 Sobic003G240700--Sobic001G335900 Sobic001G170100 Sobic001G170100 Sobic003G240700--Sobic001G170100 Sobic006G138000 Sobic006G138000 Sobic003G240700--Sobic006G138000 Sobic003G240700--Sobic003G314700 Sobic003G240700--Sobic003G293000 Sobic003G240700--Sobic009G049400 Sobic001G426600 Sobic001G426600 Sobic003G240700--Sobic001G426600 Sobic003G227100 Sobic003G227100 Sobic003G240700--Sobic003G227100 Sobic001G012900--Sobic003G293000 Sobic001G193100 Sobic001G193100 Sobic001G012900--Sobic001G193100 Sobic001G012900--Sobic005G059500 Sobic001G161700 Sobic001G161700 Sobic001G012900--Sobic001G161700 Sobic004G060300 Sobic004G060300 Sobic001G012900--Sobic004G060300 Sobic010G223400 Sobic010G223400 Sobic001G012900--Sobic010G223400 Sobic003G346400 Sobic003G346400 Sobic001G012900--Sobic003G346400 Sobic001G335000 Sobic001G335000 Sobic001G012900--Sobic001G335000 Sobic009G122500 Sobic009G122500 Sobic001G012900--Sobic009G122500 Sobic009G049400--Sobic001G369000 Sobic009G229600 Sobic009G229600 Sobic009G049400--Sobic009G229600 Sobic009G049400--Sobic001G426600 Sobic003G394200 Sobic003G394200 Sobic009G049400--Sobic003G394200 Sobic009G049400--Sobic001G335900 Sobic006G163800 Sobic006G163800 Sobic009G049400--Sobic006G163800 Sobic003G189600 Sobic003G189600 Sobic009G049400--Sobic003G189600 Sobic004G039600 Sobic004G039600 Sobic009G049400--Sobic004G039600 Sobic009G049400--Sobic003G240700 Sobic001G335900--Sobic001G369000 Sobic001G335900--Sobic006G138000 Sobic001G518400 Sobic001G518400 Sobic001G335900--Sobic001G518400 Sobic001G335900--Sobic001G170100 Sobic001G335900--Sobic003G240700 Sobic001G335900--Sobic009G229600 Sobic001G335900--Sobic009G049400 Sobic007G120500 Sobic007G120500 Sobic001G335900--Sobic007G120500 SobicK004100 SobicK004100 Sobic001G335900--SobicK004100 Sobic005G114500 Sobic005G114500 Sobic003G005900--Sobic005G114500 Sobic003G130900 Sobic003G130900 Sobic003G005900--Sobic003G130900 Sobic006G265600 Sobic006G265600 Sobic003G005900--Sobic006G265600 Sobic003G005900--Sobic003G293000 Sobic003G005900--Sobic001G474400 Sobic004G151200 Sobic004G151200 Sobic003G005900--Sobic004G151200 Sobic003G005900--Sobic001G012900 Sobic002G014800 Sobic002G014800 Sobic003G005900--Sobic002G014800 Sobic009G207200 Sobic009G207200 Sobic003G005900--Sobic009G207200 Sobic010G139500 Sobic010G139500 Sobic003G334700--Sobic010G139500 Sobic001G437400 Sobic001G437400 Sobic003G334700--Sobic001G437400 Sobic003G334700--Sobic003G314700 Sobic001G118000 Sobic001G118000 Sobic003G334700--Sobic001G118000 Sobic003G334700--Sobic005G059500 Sobic002G119600 Sobic002G119600 Sobic003G334700--Sobic002G119600 Sobic003G334700--Sobic003G293000 Sobic004G336300 Sobic004G336300 Sobic003G334700--Sobic004G336300 Sobic010G000800 Sobic010G000800 Sobic003G334700--Sobic010G000800 Sobic006G021700 Sobic006G021700 Sobic005G059500--Sobic006G021700 Sobic005G059500--Sobic001G118000 Sobic005G059500--Sobic010G223400 Sobic005G059500--Sobic001G012900 Sobic005G059500--Sobic003G346400 Sobic005G059500--Sobic005G114500 Sobic005G059500--Sobic001G474400 Sobic005G059500--Sobic009G122500 Sobic002G070600 Sobic002G070600 Sobic005G059500--Sobic002G070600 Sobic005G110499 Sobic005G110499 Sobic001G474400--Sobic005G110499 Sobic003G397900 Sobic003G397900 Sobic001G474400--Sobic003G397900 Sobic007G145400 Sobic007G145400 Sobic001G474400--Sobic007G145400 Sobic001G097900 Sobic001G097900 Sobic001G474400--Sobic001G097900 Sobic001G474400--Sobic005G114500 Sobic005G106200 Sobic005G106200 Sobic001G474400--Sobic005G106200 Sobic001G474400--Sobic010G223400 Sobic001G467100 Sobic001G467100 Sobic001G474400--Sobic001G467100 Sobic001G474400--Sobic006G265600 Sobic003G029600 Sobic003G029600 Sobic003G314700--Sobic003G029600 Sobic008G124800 Sobic008G124800 Sobic003G314700--Sobic008G124800 Sobic003G314700--Sobic001G437400 Sobic003G314700--Sobic003G240700 Sobic003G405500 Sobic003G405500 Sobic003G314700--Sobic003G405500 Sobic007G019300 Sobic007G019300 Sobic003G314700--Sobic007G019300 Sobic004G204100 Sobic004G204100 Sobic003G314700--Sobic004G204100 Sobic003G314700--Sobic001G426600 Sobic002G412700 Sobic002G412700 Sobic003G314700--Sobic002G412700
Octagon: transcription factors


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