Gene annotation
Transcriptome id Sobic.005G059500.1
Synonym Sb05g004840, TPLATE
Functional annotation expressed protein
UniProt C5Y632
Pfam -
Panther DB PTHR36029 PTHR36029:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G01780 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os02g55010.1 : expressed protein
MaizeGDB (Corn) Zm00025a033994 , Zm00025a012834 , Zm00025a012844 , Zm00025a012845
Brachypodium KQJ89206
Barley HORVU4Hr1G019290.1 , HORVU4Hr1G019290.2
Wheat TraesCS4B02G094200 , TraesCS4D02G091000 , TraesCS4D02G091000 , TraesCS4A02G222200
Populus -


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cDNA sequences
Sobic.005G059500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G021700 expressed protein K17600: vacuolar protein sorting-associated protein 54
2 Sobic.001G118000 phosphatidylinositol 4-kinase PI4K, putative, expressed K00888: phosphatidylinositol 4-kinase A
3 Sobic.010G223400 expressed protein -
4 Sobic.001G012900 brefeldin A-sensitive Golgi protein-like, putative, expressed -
5 Sobic.003G346400 vacuolar ATP synthase 98 kDa subunit, putative, expressed K02154: ATPeV0A, V-type H+-transporting ATPase subunit a
6 Sobic.005G114500 growth regulator related protein, putative, expressed -
7 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
8 Sobic.009G122500 expressed protein -
9 Sobic.002G070600 coatomer subunit gamma-2, putative, expressed K17267: coatomer subunit gamma
10 Sobic.003G334700 HEAT, putative, expressed K16803: CKAP5, cytoskeleton-associated protein 5
11 Sobic.001G308400 expressed protein -
12 Sobic.003G240700 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed -
13 Sobic.004G034300 transducin family protein, putative, expressed -
14 Sobic.004G060300 DNA binding protein, putative, expressed -
15 Sobic.010G192600 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
16 Sobic.003G293000 expressed protein -
17 Sobic.003G314700 expressed protein -
18 Sobic.005G110499 - K14006: protein transport protein SEC23
19 Sobic.001G117800 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
20 Sobic.003G249600 vacuolar protein sorting-associated protein 16, putative, expressed -


Gene co-expression network
sample Sobic005G059500 Sobic005G059500 Sobic006G021700 Sobic006G021700 Sobic005G059500--Sobic006G021700 Sobic001G118000 Sobic001G118000 Sobic005G059500--Sobic001G118000 Sobic010G223400 Sobic010G223400 Sobic005G059500--Sobic010G223400 Sobic001G012900 Sobic001G012900 Sobic005G059500--Sobic001G012900 Sobic003G346400 Sobic003G346400 Sobic005G059500--Sobic003G346400 Sobic005G114500 Sobic005G114500 Sobic005G059500--Sobic005G114500 Sobic001G474400 Sobic001G474400 Sobic005G059500--Sobic001G474400 Sobic009G122500 Sobic009G122500 Sobic005G059500--Sobic009G122500 Sobic002G070600 Sobic002G070600 Sobic005G059500--Sobic002G070600 Sobic008G124800 Sobic008G124800 Sobic006G021700--Sobic008G124800 Sobic006G077300 Sobic006G077300 Sobic006G021700--Sobic006G077300 Sobic002G340900 Sobic002G340900 Sobic006G021700--Sobic002G340900 Sobic006G021700--Sobic005G059500 Sobic003G209200 Sobic003G209200 Sobic006G021700--Sobic003G209200 Sobic006G021700--Sobic003G346400 Sobic010G000800 Sobic010G000800 Sobic006G021700--Sobic010G000800 Sobic007G005500 Sobic007G005500 Sobic006G021700--Sobic007G005500 Sobic005G110499 Sobic005G110499 Sobic006G021700--Sobic005G110499 Sobic001G118000--Sobic005G059500 Sobic001G118000--Sobic009G122500 Sobic001G118000--Sobic010G223400 Sobic003G334700 Sobic003G334700 Sobic001G118000--Sobic003G334700 Sobic007G172700 Sobic007G172700 Sobic001G118000--Sobic007G172700 Sobic001G308400 Sobic001G308400 Sobic001G118000--Sobic001G308400 Sobic004G060300 Sobic004G060300 Sobic001G118000--Sobic004G060300 Sobic009G040325 Sobic009G040325 Sobic001G118000--Sobic009G040325 Sobic001G156900 Sobic001G156900 Sobic001G118000--Sobic001G156900 Sobic010G223400--Sobic009G122500 Sobic003G394200 Sobic003G394200 Sobic010G223400--Sobic003G394200 Sobic010G223400--Sobic005G059500 Sobic001G193100 Sobic001G193100 Sobic010G223400--Sobic001G193100 Sobic003G182300 Sobic003G182300 Sobic010G223400--Sobic003G182300 Sobic010G223400--Sobic005G114500 Sobic010G223400--Sobic001G474400 Sobic004G078700 Sobic004G078700 Sobic010G223400--Sobic004G078700 Sobic010G223400--Sobic001G012900 Sobic003G293000 Sobic003G293000 Sobic001G012900--Sobic003G293000 Sobic001G012900--Sobic001G193100 Sobic001G012900--Sobic005G059500 Sobic001G161700 Sobic001G161700 Sobic001G012900--Sobic001G161700 Sobic001G012900--Sobic004G060300 Sobic001G012900--Sobic010G223400 Sobic001G012900--Sobic003G346400 Sobic001G335000 Sobic001G335000 Sobic001G012900--Sobic001G335000 Sobic001G012900--Sobic009G122500 Sobic004G254800 Sobic004G254800 Sobic003G346400--Sobic004G254800 Sobic003G346400--Sobic006G021700 Sobic003G346400--Sobic004G060300 Sobic003G346400--Sobic003G394200 Sobic006G203300 Sobic006G203300 Sobic003G346400--Sobic006G203300 Sobic001G445500 Sobic001G445500 Sobic003G346400--Sobic001G445500 Sobic003G346400--Sobic003G209200 Sobic003G346400--Sobic001G161700 Sobic003G346400--Sobic001G012900 Sobic003G130900 Sobic003G130900 Sobic005G114500--Sobic003G130900 Sobic003G230600 Sobic003G230600 Sobic005G114500--Sobic003G230600 Sobic005G114500--Sobic001G474400 Sobic005G114500--Sobic010G223400 Sobic005G114500--Sobic001G308400 Sobic003G005900 Sobic003G005900 Sobic005G114500--Sobic003G005900 Sobic005G114500--Sobic005G059500 Sobic005G114500--Sobic005G110499 Sobic005G114500--Sobic009G122500 Sobic001G474400--Sobic005G110499 Sobic003G397900 Sobic003G397900 Sobic001G474400--Sobic003G397900 Sobic007G145400 Sobic007G145400 Sobic001G474400--Sobic007G145400 Sobic001G097900 Sobic001G097900 Sobic001G474400--Sobic001G097900 Sobic001G474400--Sobic005G114500 Sobic005G106200 Sobic005G106200 Sobic001G474400--Sobic005G106200 Sobic001G474400--Sobic010G223400 Sobic001G467100 Sobic001G467100 Sobic001G474400--Sobic001G467100 Sobic006G265600 Sobic006G265600 Sobic001G474400--Sobic006G265600 Sobic009G122500--Sobic001G335000 Sobic009G122500--Sobic004G060300 Sobic009G122500--Sobic001G156900 Sobic004G122900 Sobic004G122900 Sobic009G122500--Sobic004G122900 Sobic009G122500--Sobic010G223400 Sobic009G122500--Sobic001G308400 Sobic009G122500--Sobic003G394200 Sobic001G389200 Sobic001G389200 Sobic009G122500--Sobic001G389200 Sobic009G122500--Sobic001G118000 Sobic008G072200 Sobic008G072200 Sobic002G070600--Sobic008G072200 Sobic001G117800 Sobic001G117800 Sobic002G070600--Sobic001G117800 Sobic002G070600--Sobic001G161700 Sobic008G085700 Sobic008G085700 Sobic002G070600--Sobic008G085700 Sobic004G336300 Sobic004G336300 Sobic002G070600--Sobic004G336300 Sobic003G029600 Sobic003G029600 Sobic002G070600--Sobic003G029600 Sobic002G070600--Sobic006G021700 Sobic009G118900 Sobic009G118900 Sobic002G070600--Sobic009G118900 Sobic010G178600 Sobic010G178600 Sobic002G070600--Sobic010G178600
Octagon: transcription factors


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