Gene annotation
Transcriptome id Sobic.006G177300.1
Synonym ATFUC1, Sb06g025200, FUC1
Functional annotation ATFUC1, putative, expressed
UniProt C5YDX7
Pfam PF01120
Panther DB PTHR10030 PTHR10030:SF27
NCBI CDD -
KEGG Orthology K01206; alpha-L-fucosidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004560alpha-L-fucosidase activity


Orthologs (automatic annotation)
TAIR AT2G28100 : alpha-L-fucosidase 1
RAP-DB (Rice) LOC_Os04g47280.1 : ATFUC1, putative, expressed
MaizeGDB (Corn) Zm00025a010225
Brachypodium KQJ84026
Barley -
Wheat TraesCS2A02G407300 , TraesCS2D02G404300 , TraesCS2D02G404300 , TraesCS2D02G404300 , TraesCS2B02G425000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G000600 expressed protein -
2 Sobic.001G057200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
3 Sobic.001G366800 alpha-N-acetylglucosaminidase, putative, expressed K01205: alpha-N-acetylglucosaminidase
4 Sobic.001G242800 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
5 Sobic.002G143000 ubiquitin family protein, putative, expressed -
6 Sobic.002G259400 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
7 Sobic.006G179700 Ser/Thr-rich protein T10 in DGCR region, putative, expressed -
8 Sobic.003G376400 expressed protein -
9 Sobic.001G322000 pollen ankyrin, putative, expressed K19044: E3 ubiquitin-protein ligase XBAT32/33
10 Sobic.004G057100 tubulin-specific chaperone E, putative, expressed -
11 Sobic.001G222400 tetratricopeptide repeat domain containing protein, expressed -
12 Sobic.010G138500 lectin protein kinase family protein, putative, expressed -
13 Sobic.006G281500 prenylcysteine oxidase 1 precursor, putative, expressed K05906: PCYOX1, prenylcysteine oxidase / farnesylcysteine lyase
14 Sobic.010G050200 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
15 Sobic.001G540100 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
16 Sobic.007G188600 tRNA synthetase class II core domain containing protein, expressed K01880: GARS, glycyl-tRNA synthetase
17 Sobic.006G264500 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
18 Sobic.004G161900 AMP-binding enzyme, putative, expressed K01895: ACSS1_2, acetyl-CoA synthetase
19 Sobic.010G269100 zinc finger family protein, putative, expressed -
20 Sobic.006G248400 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase


Gene co-expression network
sample Sobic006G177300 Sobic006G177300 Sobic006G000600 Sobic006G000600 Sobic006G177300--Sobic006G000600 Sobic001G057200 Sobic001G057200 Sobic006G177300--Sobic001G057200 Sobic001G366800 Sobic001G366800 Sobic006G177300--Sobic001G366800 Sobic001G242800 Sobic001G242800 Sobic006G177300--Sobic001G242800 Sobic002G143000 Sobic002G143000 Sobic006G177300--Sobic002G143000 Sobic002G259400 Sobic002G259400 Sobic006G177300--Sobic002G259400 Sobic006G179700 Sobic006G179700 Sobic006G177300--Sobic006G179700 Sobic003G376400 Sobic003G376400 Sobic006G177300--Sobic003G376400 Sobic001G322000 Sobic001G322000 Sobic006G177300--Sobic001G322000 Sobic004G161900 Sobic004G161900 Sobic006G000600--Sobic004G161900 Sobic009G033100 Sobic009G033100 Sobic006G000600--Sobic009G033100 Sobic006G000600--Sobic006G177300 Sobic001G365200 Sobic001G365200 Sobic006G000600--Sobic001G365200 Sobic003G368000 Sobic003G368000 Sobic006G000600--Sobic003G368000 Sobic005G134600 Sobic005G134600 Sobic006G000600--Sobic005G134600 Sobic004G323900 Sobic004G323900 Sobic006G000600--Sobic004G323900 Sobic005G110541 Sobic005G110541 Sobic006G000600--Sobic005G110541 Sobic006G243500 Sobic006G243500 Sobic006G000600--Sobic006G243500 Sobic010G146600 Sobic010G146600 Sobic001G057200--Sobic010G146600 Sobic002G317300 Sobic002G317300 Sobic001G057200--Sobic002G317300 Sobic002G092300 Sobic002G092300 Sobic001G057200--Sobic002G092300 Sobic010G249300 Sobic010G249300 Sobic001G057200--Sobic010G249300 Sobic003G372000 Sobic003G372000 Sobic001G057200--Sobic003G372000 Sobic006G047100 Sobic006G047100 Sobic001G057200--Sobic006G047100 Sobic005G044800 Sobic005G044800 Sobic001G057200--Sobic005G044800 Sobic001G057200--Sobic002G143000 Sobic006G264500 Sobic006G264500 Sobic001G057200--Sobic006G264500 Sobic009G055400 Sobic009G055400 Sobic001G366800--Sobic009G055400 Sobic001G215900 Sobic001G215900 Sobic001G366800--Sobic001G215900 Sobic002G301500 Sobic002G301500 Sobic001G366800--Sobic002G301500 Sobic004G134100 Sobic004G134100 Sobic001G366800--Sobic004G134100 Sobic001G366800--Sobic006G177300 Sobic004G247300 Sobic004G247300 Sobic001G366800--Sobic004G247300 Sobic002G393200 Sobic002G393200 Sobic001G366800--Sobic002G393200 Sobic010G138500 Sobic010G138500 Sobic001G366800--Sobic010G138500 Sobic010G242900 Sobic010G242900 Sobic001G366800--Sobic010G242900 Sobic002G392800 Sobic002G392800 Sobic001G242800--Sobic002G392800 Sobic002G319200 Sobic002G319200 Sobic001G242800--Sobic002G319200 Sobic004G152200 Sobic004G152200 Sobic001G242800--Sobic004G152200 Sobic008G004100 Sobic008G004100 Sobic001G242800--Sobic008G004100 Sobic001G112700 Sobic001G112700 Sobic001G242800--Sobic001G112700 Sobic009G126500 Sobic009G126500 Sobic001G242800--Sobic009G126500 Sobic001G432300 Sobic001G432300 Sobic001G242800--Sobic001G432300 Sobic009G151700 Sobic009G151700 Sobic001G242800--Sobic009G151700 Sobic001G242800--Sobic006G177300 Sobic010G057900 Sobic010G057900 Sobic002G143000--Sobic010G057900 Sobic001G458700 Sobic001G458700 Sobic002G143000--Sobic001G458700 Sobic004G326600 Sobic004G326600 Sobic002G143000--Sobic004G326600 Sobic004G081800 Sobic004G081800 Sobic002G143000--Sobic004G081800 Sobic002G341800 Sobic002G341800 Sobic002G143000--Sobic002G341800 Sobic005G105500 Sobic005G105500 Sobic002G143000--Sobic005G105500 Sobic006G056600 Sobic006G056600 Sobic002G143000--Sobic006G056600 Sobic001G091900 Sobic001G091900 Sobic002G143000--Sobic001G091900 Sobic002G268400 Sobic002G268400 Sobic002G143000--Sobic002G268400 Sobic003G119400 Sobic003G119400 Sobic002G259400--Sobic003G119400 Sobic004G074300 Sobic004G074300 Sobic002G259400--Sobic004G074300 Sobic001G041200 Sobic001G041200 Sobic002G259400--Sobic001G041200 Sobic002G259400--Sobic002G268400 Sobic009G033900 Sobic009G033900 Sobic002G259400--Sobic009G033900 Sobic010G269100 Sobic010G269100 Sobic002G259400--Sobic010G269100 Sobic006G281500 Sobic006G281500 Sobic002G259400--Sobic006G281500 Sobic001G263000 Sobic001G263000 Sobic002G259400--Sobic001G263000 Sobic010G085200 Sobic010G085200 Sobic002G259400--Sobic010G085200 Sobic010G050200 Sobic010G050200 Sobic006G179700--Sobic010G050200 Sobic002G342500 Sobic002G342500 Sobic006G179700--Sobic002G342500 Sobic006G179700--Sobic006G177300 Sobic006G038200 Sobic006G038200 Sobic006G179700--Sobic006G038200 Sobic010G212200 Sobic010G212200 Sobic006G179700--Sobic010G212200 Sobic006G179700--Sobic001G112700 Sobic003G198500 Sobic003G198500 Sobic006G179700--Sobic003G198500 Sobic008G088830 Sobic008G088830 Sobic006G179700--Sobic008G088830 Sobic008G156300 Sobic008G156300 Sobic006G179700--Sobic008G156300 Sobic003G376400--Sobic005G044800 Sobic002G166300 Sobic002G166300 Sobic003G376400--Sobic002G166300 Sobic004G301700 Sobic004G301700 Sobic003G376400--Sobic004G301700 Sobic003G376400--Sobic001G057200 Sobic010G123400 Sobic010G123400 Sobic003G376400--Sobic010G123400 Sobic003G376400--Sobic006G177300 Sobic003G376400--Sobic004G081800 Sobic006G244700 Sobic006G244700 Sobic003G376400--Sobic006G244700 Sobic003G376400--Sobic003G372000 Sobic002G408800 Sobic002G408800 Sobic001G322000--Sobic002G408800 Sobic003G400100 Sobic003G400100 Sobic001G322000--Sobic003G400100 Sobic001G322000--Sobic002G342500 Sobic001G261456 Sobic001G261456 Sobic001G322000--Sobic001G261456 Sobic009G214900 Sobic009G214900 Sobic001G322000--Sobic009G214900 Sobic003G126600 Sobic003G126600 Sobic001G322000--Sobic003G126600 SobicK004100 SobicK004100 Sobic001G322000--SobicK004100 Sobic004G057100 Sobic004G057100 Sobic001G322000--Sobic004G057100 Sobic007G203500 Sobic007G203500 Sobic001G322000--Sobic007G203500
Octagon: transcription factors


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