Gene annotation
Transcriptome id Sobic.006G000600.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PJA2
Pfam PF13855 PF00069
Panther DB PTHR27003 PTHR27003:SF36
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G06840 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os01g72990.1 : expressed protein
MaizeGDB (Corn) Zm00025a012167
Brachypodium KQK11847 , KQK11848 , PNT71048 , PNT71046 , PNT71047 , PNT71044 , PNT71045 , PNT71042 , PNT71043 , KQK10332 , KQK10330 , KQK10331
Barley HORVU3Hr1G117890.31 , HORVU3Hr1G117890.30 , HORVU3Hr1G117890.19 , HORVU3Hr1G117890.18 , HORVU3Hr1G117890.15 , HORVU3Hr1G117890.14 , HORVU3Hr1G117890.17 , HORVU3Hr1G117890.16 , HORVU3Hr1G117890.11 , HORVU3Hr1G117890.10 , HORVU3Hr1G117890.13 , HORVU3Hr1G117890.12 , HORVU3Hr1G117890.28 , HORVU3Hr1G117890.29 , HORVU3Hr1G117890.20 , HORVU3Hr1G117890.21 , HORVU3Hr1G117890.22 , HORVU3Hr1G117890.23 , HORVU3Hr1G117890.24 , HORVU3Hr1G117890.25 , HORVU3Hr1G117890.26 , HORVU3Hr1G117890.27 , HORVU3Hr1G117890.9 , HORVU3Hr1G117890.8 , HORVU3Hr1G117890.1 , HORVU3Hr1G117890.3 , HORVU3Hr1G117890.2 , HORVU3Hr1G117890.5 , HORVU3Hr1G117890.4 , HORVU3Hr1G117890.7 , HORVU3Hr1G117890.6
Wheat TraesCS3B02G602700 , TraesCS3B02G602700 , TraesCS3B02G602700 , TraesCS3D02G542300 , TraesCS3A02G536900 , TraesCS3D02G335600 , TraesCS7D02G129500 , TraesCS3B02G373900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G161900 AMP-binding enzyme, putative, expressed K01895: ACSS1_2, acetyl-CoA synthetase
2 Sobic.009G033100 OsWAK4 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
3 Sobic.006G177300 ATFUC1, putative, expressed K01206: alpha-L-fucosidase
4 Sobic.001G365200 aminotransferase domain containing protein, putative, expressed -
5 Sobic.003G368000 OsFBT3 - F-box and tubby domain containing protein, expressed -
6 Sobic.005G134600 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
7 Sobic.004G323900 protein kinase, putative, expressed K09553: stress-induced-phosphoprotein 1
8 Sobic.005G110541 - K16054: methylthioribulose 1-phosphate dehydratase / enolase-phosphatase E1
9 Sobic.006G243500 alpha-N-acetylglucosaminidase, putative, expressed K01205: alpha-N-acetylglucosaminidase
10 Sobic.004G079700 metal cation transporter, putative, expressed K07238: TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family
11 Sobic.010G187500 CRAL/TRIO domain containing protein, expressed -
12 Sobic.002G143000 ubiquitin family protein, putative, expressed -
13 Sobic.002G083600 AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
14 Sobic.006G030800 glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase
15 Sobic.006G075600 WD-40 repeat family protein, putative, expressed -
16 Sobic.003G287400 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
17 Sobic.010G138500 lectin protein kinase family protein, putative, expressed -
18 Sobic.010G045400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
19 Sobic.001G366800 alpha-N-acetylglucosaminidase, putative, expressed K01205: alpha-N-acetylglucosaminidase
20 Sobic.001G322000 pollen ankyrin, putative, expressed K19044: E3 ubiquitin-protein ligase XBAT32/33


Gene co-expression network
sample Sobic006G000600 Sobic006G000600 Sobic004G161900 Sobic004G161900 Sobic006G000600--Sobic004G161900 Sobic009G033100 Sobic009G033100 Sobic006G000600--Sobic009G033100 Sobic006G177300 Sobic006G177300 Sobic006G000600--Sobic006G177300 Sobic001G365200 Sobic001G365200 Sobic006G000600--Sobic001G365200 Sobic003G368000 Sobic003G368000 Sobic006G000600--Sobic003G368000 Sobic005G134600 Sobic005G134600 Sobic006G000600--Sobic005G134600 Sobic004G323900 Sobic004G323900 Sobic006G000600--Sobic004G323900 Sobic005G110541 Sobic005G110541 Sobic006G000600--Sobic005G110541 Sobic006G243500 Sobic006G243500 Sobic006G000600--Sobic006G243500 Sobic004G161900--Sobic003G368000 Sobic003G017601 Sobic003G017601 Sobic004G161900--Sobic003G017601 Sobic010G045400 Sobic010G045400 Sobic004G161900--Sobic010G045400 Sobic008G037900 Sobic008G037900 Sobic004G161900--Sobic008G037900 Sobic001G460400 Sobic001G460400 Sobic004G161900--Sobic001G460400 Sobic001G218500 Sobic001G218500 Sobic004G161900--Sobic001G218500 Sobic003G079100 Sobic003G079100 Sobic004G161900--Sobic003G079100 Sobic002G383900 Sobic002G383900 Sobic004G161900--Sobic002G383900 Sobic003G020500 Sobic003G020500 Sobic004G161900--Sobic003G020500 Sobic009G033100--Sobic006G000600 Sobic009G033100--Sobic005G110541 Sobic006G000700 Sobic006G000700 Sobic009G033100--Sobic006G000700 Sobic010G123400 Sobic010G123400 Sobic009G033100--Sobic010G123400 Sobic002G301500 Sobic002G301500 Sobic009G033100--Sobic002G301500 Sobic009G033100--Sobic004G161900 Sobic003G192600 Sobic003G192600 Sobic009G033100--Sobic003G192600 Sobic003G017400 Sobic003G017400 Sobic009G033100--Sobic003G017400 Sobic002G120300 Sobic002G120300 Sobic009G033100--Sobic002G120300 Sobic006G177300--Sobic006G000600 Sobic001G057200 Sobic001G057200 Sobic006G177300--Sobic001G057200 Sobic001G366800 Sobic001G366800 Sobic006G177300--Sobic001G366800 Sobic001G242800 Sobic001G242800 Sobic006G177300--Sobic001G242800 Sobic002G143000 Sobic002G143000 Sobic006G177300--Sobic002G143000 Sobic002G259400 Sobic002G259400 Sobic006G177300--Sobic002G259400 Sobic006G179700 Sobic006G179700 Sobic006G177300--Sobic006G179700 Sobic003G376400 Sobic003G376400 Sobic006G177300--Sobic003G376400 Sobic001G322000 Sobic001G322000 Sobic006G177300--Sobic001G322000 Sobic001G365200--Sobic004G161900 Sobic001G365200--Sobic003G368000 Sobic001G365200--Sobic002G383900 Sobic003G105000 Sobic003G105000 Sobic001G365200--Sobic003G105000 Sobic005G022500 Sobic005G022500 Sobic001G365200--Sobic005G022500 Sobic001G365200--Sobic010G045400 Sobic007G119500 Sobic007G119500 Sobic001G365200--Sobic007G119500 Sobic001G365200--Sobic006G000600 Sobic001G365200--Sobic008G037900 Sobic003G368000--Sobic004G161900 Sobic003G368000--Sobic008G037900 Sobic003G099000 Sobic003G099000 Sobic003G368000--Sobic003G099000 Sobic003G368000--Sobic010G045400 Sobic003G368000--Sobic003G017601 Sobic010G097200 Sobic010G097200 Sobic003G368000--Sobic010G097200 Sobic010G191700 Sobic010G191700 Sobic003G368000--Sobic010G191700 Sobic003G368000--Sobic003G079100 Sobic002G391400 Sobic002G391400 Sobic003G368000--Sobic002G391400 Sobic005G134600--Sobic003G017601 Sobic001G067800 Sobic001G067800 Sobic005G134600--Sobic001G067800 Sobic005G134600--Sobic004G161900 Sobic005G134600--Sobic001G218500 Sobic003G287450 Sobic003G287450 Sobic005G134600--Sobic003G287450 Sobic007G120000 Sobic007G120000 Sobic005G134600--Sobic007G120000 Sobic004G106300 Sobic004G106300 Sobic005G134600--Sobic004G106300 Sobic003G287400 Sobic003G287400 Sobic005G134600--Sobic003G287400 Sobic006G230300 Sobic006G230300 Sobic005G134600--Sobic006G230300 Sobic004G323900--Sobic003G192600 Sobic004G323900--Sobic003G287400 Sobic005G075400 Sobic005G075400 Sobic004G323900--Sobic005G075400 Sobic004G323900--Sobic003G287450 Sobic004G059600 Sobic004G059600 Sobic004G323900--Sobic004G059600 Sobic004G312500 Sobic004G312500 Sobic004G323900--Sobic004G312500 Sobic002G411000 Sobic002G411000 Sobic004G323900--Sobic002G411000 Sobic006G108300 Sobic006G108300 Sobic004G323900--Sobic006G108300 Sobic006G009700 Sobic006G009700 Sobic004G323900--Sobic006G009700 Sobic005G100800 Sobic005G100800 Sobic005G110541--Sobic005G100800 Sobic007G193200 Sobic007G193200 Sobic005G110541--Sobic007G193200 Sobic001G353200 Sobic001G353200 Sobic005G110541--Sobic001G353200 Sobic010G187500 Sobic010G187500 Sobic005G110541--Sobic010G187500 Sobic004G261500 Sobic004G261500 Sobic005G110541--Sobic004G261500 Sobic001G443100 Sobic001G443100 Sobic005G110541--Sobic001G443100 Sobic007G212000 Sobic007G212000 Sobic005G110541--Sobic007G212000 Sobic001G243100 Sobic001G243100 Sobic005G110541--Sobic001G243100 Sobic004G299500 Sobic004G299500 Sobic005G110541--Sobic004G299500 Sobic004G079700 Sobic004G079700 Sobic006G243500--Sobic004G079700 Sobic009G246700 Sobic009G246700 Sobic006G243500--Sobic009G246700 Sobic006G243500--Sobic004G161900 Sobic003G045600 Sobic003G045600 Sobic006G243500--Sobic003G045600 Sobic006G243500--Sobic005G100800 Sobic006G243500--Sobic001G460400 Sobic006G243500--Sobic006G000600 Sobic006G243500--Sobic007G193200 Sobic002G408800 Sobic002G408800 Sobic006G243500--Sobic002G408800
Octagon: transcription factors


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