Gene annotation
Transcriptome id Sobic.005G110541.1
Synonym -
Functional annotation -
UniProt C6JS30 , A0A109NDJ6
Pfam PF13419 PF00596
Panther DB PTHR10640
NCBI CDD KOG2631; Class II aldolase/adducin N-terminal domain protein
KEGG Orthology K16054; methylthioribulose 1-phosphate dehydratase / enolase-phosphatase E1
Gene Ontology GO:0005737; cytoplasm


Orthologs (automatic annotation)
TAIR AT5G53850 : haloacid dehalogenase-like hydrolase family protein
RAP-DB (Rice) LOC_Os11g29370.1 : haloacid dehalogenase-like hydrolase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a029738
Brachypodium KQK01716 , KQK01714 , KQK01715 , KQK01713
Barley HORVU5Hr1G026730.1 , HORVU5Hr1G026730.3 , HORVU5Hr1G026730.2 , HORVU5Hr1G026730.5 , HORVU5Hr1G026730.4 , HORVU5Hr1G026730.7 , HORVU5Hr1G026730.6 , HORVU5Hr1G026730.9
Wheat TraesCS5B02G103900 , TraesCS5B02G103900 , TraesCS5B02G103900 , TraesCS5B02G103900 , TraesCS5D02G110900 , TraesCS5D02G110900 , TraesCS5A02G098700 , TraesCS5A02G098700 , TraesCS5A02G098700 , TraesCS5A02G098700 , TraesCS5A02G098700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G100800 initiation factor 2 subunit family domain containing protein, expressed K08963: methylthioribose-1-phosphate isomerase
2 Sobic.007G193200 MTA/SAH nucleosidase, putative, expressed K01244: 5'-methylthioadenosine nucleosidase
3 Sobic.001G353200 ctr copper transporter family protein, putative, expressed K14686: SLC31A1, solute carrier family 31 (copper transporter), member 1
4 Sobic.010G187500 CRAL/TRIO domain containing protein, expressed -
5 Sobic.004G261500 phosphoribosyl transferase, putative, expressed -
6 Sobic.001G443100 Oxidoreductase superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
7 Sobic.007G212000 receptor-like protein kinase precursor, putative, expressed -
8 Sobic.001G243100 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed K08967: mtnD, mtnZ, 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
9 Sobic.004G299500 - -
10 Sobic.001G395900 Nicotianamine synthase 4("PubMedID : 26759170,PubMedID : 24597475")@nicotianamine synthase, putative, expressed K05953: nicotianamine synthase
11 Sobic.006G121000 purine permease, putative, expressed -
12 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
13 Sobic.007G202480 - -
14 Sobic.002G041100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine aminotransferase, putative, expressed K00815: tyrosine aminotransferase
15 Sobic.008G058600 protein kinase family protein, putative, expressed -
16 Sobic.005G097900 major facilitator superfamily antiporter, putative, expressed -
17 Sobic.008G008801 - -
18 Sobic.007G015000 methyltransferase domain containing protein, expressed -
19 Sobic.006G229901 - -
20 Sobic.008G105800 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic005G110541 Sobic005G110541 Sobic005G100800 Sobic005G100800 Sobic005G110541--Sobic005G100800 Sobic007G193200 Sobic007G193200 Sobic005G110541--Sobic007G193200 Sobic001G353200 Sobic001G353200 Sobic005G110541--Sobic001G353200 Sobic010G187500 Sobic010G187500 Sobic005G110541--Sobic010G187500 Sobic004G261500 Sobic004G261500 Sobic005G110541--Sobic004G261500 Sobic001G443100 Sobic001G443100 Sobic005G110541--Sobic001G443100 Sobic007G212000 Sobic007G212000 Sobic005G110541--Sobic007G212000 Sobic001G243100 Sobic001G243100 Sobic005G110541--Sobic001G243100 Sobic004G299500 Sobic004G299500 Sobic005G110541--Sobic004G299500 Sobic005G100800--Sobic007G193200 Sobic005G100800--Sobic005G110541 Sobic005G100800--Sobic004G261500 Sobic008G109400 Sobic008G109400 Sobic005G100800--Sobic008G109400 Sobic001G271300 Sobic001G271300 Sobic005G100800--Sobic001G271300 Sobic001G395900 Sobic001G395900 Sobic005G100800--Sobic001G395900 Sobic003G154500 Sobic003G154500 Sobic005G100800--Sobic003G154500 Sobic006G230200 Sobic006G230200 Sobic005G100800--Sobic006G230200 Sobic002G041100 Sobic002G041100 Sobic005G100800--Sobic002G041100 Sobic007G193200--Sobic004G261500 Sobic004G079900 Sobic004G079900 Sobic007G193200--Sobic004G079900 Sobic001G181600 Sobic001G181600 Sobic007G193200--Sobic001G181600 Sobic007G193200--Sobic003G154500 Sobic001G218400 Sobic001G218400 Sobic007G193200--Sobic001G218400 Sobic005G033000 Sobic005G033000 Sobic007G193200--Sobic005G033000 Sobic001G454900 Sobic001G454900 Sobic007G193200--Sobic001G454900 Sobic005G119900 Sobic005G119900 Sobic007G193200--Sobic005G119900 Sobic003G441800 Sobic003G441800 Sobic007G193200--Sobic003G441800 Sobic001G353200--Sobic007G193200 Sobic001G243150 Sobic001G243150 Sobic001G353200--Sobic001G243150 Sobic005G046400 Sobic005G046400 Sobic001G353200--Sobic005G046400 Sobic009G065700 Sobic009G065700 Sobic001G353200--Sobic009G065700 Sobic002G111900 Sobic002G111900 Sobic001G353200--Sobic002G111900 Sobic010G191600 Sobic010G191600 Sobic001G353200--Sobic010G191600 Sobic009G225800 Sobic009G225800 Sobic001G353200--Sobic009G225800 Sobic001G353200--Sobic003G441800 Sobic002G289500 Sobic002G289500 Sobic001G353200--Sobic002G289500 Sobic010G187500--Sobic005G110541 Sobic010G187500--Sobic005G100800 Sobic002G030650 Sobic002G030650 Sobic010G187500--Sobic002G030650 Sobic010G093300 Sobic010G093300 Sobic010G187500--Sobic010G093300 Sobic010G187500--Sobic007G193200 Sobic010G187500--Sobic001G353200 Sobic003G023600 Sobic003G023600 Sobic010G187500--Sobic003G023600 Sobic006G224500 Sobic006G224500 Sobic010G187500--Sobic006G224500 Sobic005G194900 Sobic005G194900 Sobic010G187500--Sobic005G194900 Sobic004G261500--Sobic001G395900 Sobic005G101000 Sobic005G101000 Sobic004G261500--Sobic005G101000 Sobic006G230100 Sobic006G230100 Sobic004G261500--Sobic006G230100 Sobic004G261500--Sobic004G299500 Sobic008G058600 Sobic008G058600 Sobic004G261500--Sobic008G058600 Sobic007G202480 Sobic007G202480 Sobic004G261500--Sobic007G202480 Sobic004G261500--Sobic006G230200 Sobic001G153100 Sobic001G153100 Sobic004G261500--Sobic001G153100 Sobic004G261500--Sobic003G154500 Sobic001G443100--Sobic004G261500 Sobic001G443100--Sobic001G395900 Sobic001G443100--Sobic005G101000 Sobic002G082000 Sobic002G082000 Sobic001G443100--Sobic002G082000 Sobic001G443100--Sobic006G230100 Sobic001G443100--Sobic003G154500 Sobic001G443100--Sobic005G033000 Sobic001G443100--Sobic006G230200 Sobic001G443100--Sobic008G058600 Sobic007G015000 Sobic007G015000 Sobic007G212000--Sobic007G015000 Sobic007G212000--Sobic006G230100 Sobic008G105800 Sobic008G105800 Sobic007G212000--Sobic008G105800 Sobic005G216400 Sobic005G216400 Sobic007G212000--Sobic005G216400 Sobic006G121000 Sobic006G121000 Sobic007G212000--Sobic006G121000 Sobic007G212000--Sobic007G202480 Sobic007G212000--Sobic004G299500 Sobic005G060200 Sobic005G060200 Sobic007G212000--Sobic005G060200 Sobic007G212000--Sobic001G181600 Sobic001G243100--Sobic005G110541 Sobic001G243100--Sobic007G193200 Sobic001G243100--Sobic005G100800 Sobic001G243100--Sobic001G353200 Sobic001G243100--Sobic002G041100 Sobic002G194600 Sobic002G194600 Sobic001G243100--Sobic002G194600 Sobic005G115600 Sobic005G115600 Sobic001G243100--Sobic005G115600 Sobic001G243100--Sobic001G443100 Sobic006G030800 Sobic006G030800 Sobic001G243100--Sobic006G030800 Sobic004G299500--Sobic006G230100 Sobic004G299500--Sobic001G395900 Sobic004G299500--Sobic007G202480 Sobic005G069166 Sobic005G069166 Sobic004G299500--Sobic005G069166 Sobic006G229901 Sobic006G229901 Sobic004G299500--Sobic006G229901 Sobic004G299500--Sobic007G015000 Sobic005G069332 Sobic005G069332 Sobic004G299500--Sobic005G069332 Sobic004G299500--Sobic001G153100 Sobic004G299500--Sobic008G058600
Octagon: transcription factors


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