Gene annotation
Transcriptome id Sobic.010G187500.1
Synonym Sb10g023760
Functional annotation CRAL/TRIO domain containing protein, expressed
UniProt C5Z5Q2
Pfam PF03765 PF00650
Panther DB PTHR23324 PTHR23324:SF79
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55840 : Sec14p-like phosphatidylinositol transfer family protein
RAP-DB (Rice) LOC_Os02g10650.1 : CRAL/TRIO domain containing protein, expressed
MaizeGDB (Corn) Zm00025a051331
Brachypodium PNT75658 , PNT75659 , PNT75660 , KQK17736 , KQK17735
Barley -
Wheat TraesCS7B02G280200 , TraesCS7B02G280200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G110541 - K16054: methylthioribulose 1-phosphate dehydratase / enolase-phosphatase E1
2 Sobic.005G100800 initiation factor 2 subunit family domain containing protein, expressed K08963: methylthioribose-1-phosphate isomerase
3 Sobic.002G030650 - -
4 Sobic.010G093300 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.007G193200 MTA/SAH nucleosidase, putative, expressed K01244: 5'-methylthioadenosine nucleosidase
6 Sobic.001G353200 ctr copper transporter family protein, putative, expressed K14686: SLC31A1, solute carrier family 31 (copper transporter), member 1
7 Sobic.003G023600 peptide-N4-asparagine amidase A, putative, expressed -
8 Sobic.006G224500 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.005G194900 phosphoserine phosphatase, chloroplast precursor, putative, expressed K01079: serB, phosphoserine phosphatase
10 Sobic.009G006300 auxin-induced protein 5NG4, putative, expressed -
11 Sobic.007G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450, putative, expressed -
12 Sobic.005G127200 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.001G068500 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
14 Sobic.004G346300 expressed protein -
15 Sobic.003G428300 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@OsRR4 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
16 Sobic.006G117100 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
17 Sobic.003G105000 kinase, pfkB family, putative, expressed -
18 Sobic.010G268700 expansin precursor, putative, expressed -
19 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
20 Sobic.005G119900 reticuline oxidase-like protein precursor, putative, expressed -


Gene co-expression network
sample Sobic010G187500 Sobic010G187500 Sobic005G110541 Sobic005G110541 Sobic010G187500--Sobic005G110541 Sobic005G100800 Sobic005G100800 Sobic010G187500--Sobic005G100800 Sobic002G030650 Sobic002G030650 Sobic010G187500--Sobic002G030650 Sobic010G093300 Sobic010G093300 Sobic010G187500--Sobic010G093300 Sobic007G193200 Sobic007G193200 Sobic010G187500--Sobic007G193200 Sobic001G353200 Sobic001G353200 Sobic010G187500--Sobic001G353200 Sobic003G023600 Sobic003G023600 Sobic010G187500--Sobic003G023600 Sobic006G224500 Sobic006G224500 Sobic010G187500--Sobic006G224500 Sobic005G194900 Sobic005G194900 Sobic010G187500--Sobic005G194900 Sobic005G110541--Sobic005G100800 Sobic005G110541--Sobic007G193200 Sobic005G110541--Sobic001G353200 Sobic005G110541--Sobic010G187500 Sobic004G261500 Sobic004G261500 Sobic005G110541--Sobic004G261500 Sobic001G443100 Sobic001G443100 Sobic005G110541--Sobic001G443100 Sobic007G212000 Sobic007G212000 Sobic005G110541--Sobic007G212000 Sobic001G243100 Sobic001G243100 Sobic005G110541--Sobic001G243100 Sobic004G299500 Sobic004G299500 Sobic005G110541--Sobic004G299500 Sobic005G100800--Sobic007G193200 Sobic005G100800--Sobic005G110541 Sobic005G100800--Sobic004G261500 Sobic008G109400 Sobic008G109400 Sobic005G100800--Sobic008G109400 Sobic001G271300 Sobic001G271300 Sobic005G100800--Sobic001G271300 Sobic001G395900 Sobic001G395900 Sobic005G100800--Sobic001G395900 Sobic003G154500 Sobic003G154500 Sobic005G100800--Sobic003G154500 Sobic006G230200 Sobic006G230200 Sobic005G100800--Sobic006G230200 Sobic002G041100 Sobic002G041100 Sobic005G100800--Sobic002G041100 Sobic005G127200 Sobic005G127200 Sobic002G030650--Sobic005G127200 Sobic002G030650--Sobic010G093300 Sobic002G030575 Sobic002G030575 Sobic002G030650--Sobic002G030575 Sobic001G068500 Sobic001G068500 Sobic002G030650--Sobic001G068500 Sobic004G266700 Sobic004G266700 Sobic002G030650--Sobic004G266700 Sobic003G341500 Sobic003G341500 Sobic002G030650--Sobic003G341500 Sobic002G030650--Sobic003G023600 Sobic002G030800 Sobic002G030800 Sobic002G030650--Sobic002G030800 Sobic004G231700 Sobic004G231700 Sobic002G030650--Sobic004G231700 Sobic010G093300--Sobic005G127200 Sobic010G093300--Sobic001G068500 Sobic001G059600 Sobic001G059600 Sobic010G093300--Sobic001G059600 Sobic002G050300 Sobic002G050300 Sobic010G093300--Sobic002G050300 Sobic001G413700 Sobic001G413700 Sobic010G093300--Sobic001G413700 Sobic010G093300--Sobic006G224500 Sobic010G093300--Sobic004G266700 Sobic003G368100 Sobic003G368100 Sobic010G093300--Sobic003G368100 Sobic009G006300 Sobic009G006300 Sobic010G093300--Sobic009G006300 Sobic007G193200--Sobic004G261500 Sobic004G079900 Sobic004G079900 Sobic007G193200--Sobic004G079900 Sobic001G181600 Sobic001G181600 Sobic007G193200--Sobic001G181600 Sobic007G193200--Sobic003G154500 Sobic001G218400 Sobic001G218400 Sobic007G193200--Sobic001G218400 Sobic005G033000 Sobic005G033000 Sobic007G193200--Sobic005G033000 Sobic001G454900 Sobic001G454900 Sobic007G193200--Sobic001G454900 Sobic005G119900 Sobic005G119900 Sobic007G193200--Sobic005G119900 Sobic003G441800 Sobic003G441800 Sobic007G193200--Sobic003G441800 Sobic001G353200--Sobic007G193200 Sobic001G243150 Sobic001G243150 Sobic001G353200--Sobic001G243150 Sobic005G046400 Sobic005G046400 Sobic001G353200--Sobic005G046400 Sobic009G065700 Sobic009G065700 Sobic001G353200--Sobic009G065700 Sobic002G111900 Sobic002G111900 Sobic001G353200--Sobic002G111900 Sobic010G191600 Sobic010G191600 Sobic001G353200--Sobic010G191600 Sobic009G225800 Sobic009G225800 Sobic001G353200--Sobic009G225800 Sobic001G353200--Sobic003G441800 Sobic002G289500 Sobic002G289500 Sobic001G353200--Sobic002G289500 Sobic004G346300 Sobic004G346300 Sobic003G023600--Sobic004G346300 Sobic003G023600--Sobic007G212000 Sobic007G177400 Sobic007G177400 Sobic003G023600--Sobic007G177400 Sobic004G002901 Sobic004G002901 Sobic003G023600--Sobic004G002901 Sobic003G023600--Sobic001G181600 Sobic007G111800 Sobic007G111800 Sobic003G023600--Sobic007G111800 Sobic003G023600--Sobic003G154500 Sobic003G357700 Sobic003G357700 Sobic003G023600--Sobic003G357700 Sobic005G105700 Sobic005G105700 Sobic003G023600--Sobic005G105700 Sobic010G152500 Sobic010G152500 Sobic006G224500--Sobic010G152500 Sobic002G391900 Sobic002G391900 Sobic006G224500--Sobic002G391900 Sobic004G009200 Sobic004G009200 Sobic006G224500--Sobic004G009200 Sobic003G382200 Sobic003G382200 Sobic006G224500--Sobic003G382200 Sobic005G216600 Sobic005G216600 Sobic006G224500--Sobic005G216600 Sobic006G031100 Sobic006G031100 Sobic006G224500--Sobic006G031100 Sobic006G097900 Sobic006G097900 Sobic006G224500--Sobic006G097900 Sobic006G085700 Sobic006G085700 Sobic006G224500--Sobic006G085700 Sobic002G146000 Sobic002G146000 Sobic006G224500--Sobic002G146000 Sobic004G282700 Sobic004G282700 Sobic005G194900--Sobic004G282700 Sobic002G431100 Sobic002G431100 Sobic005G194900--Sobic002G431100 Sobic009G236100 Sobic009G236100 Sobic005G194900--Sobic009G236100 Sobic007G147800 Sobic007G147800 Sobic005G194900--Sobic007G147800 Sobic003G428300 Sobic003G428300 Sobic005G194900--Sobic003G428300 Sobic005G194900--Sobic010G187500 Sobic004G213200 Sobic004G213200 Sobic005G194900--Sobic004G213200 Sobic004G162000 Sobic004G162000 Sobic005G194900--Sobic004G162000 Sobic007G047300 Sobic007G047300 Sobic005G194900--Sobic007G047300
Octagon: transcription factors


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