Gene annotation
Transcriptome id Sobic.004G079700.1
Synonym Sb04g006580, ZTP29
Functional annotation metal cation transporter, putative, expressed
UniProt A0A1Z5RLV8
Pfam PF02535
Panther DB PTHR11040 PTHR11040:SF46
NCBI CDD KOG2474; Zinc transporter and related ZIP domain-containing proteins
KEGG Orthology K07238; TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT3G20870 : ZIP metal ion transporter family
RAP-DB (Rice) LOC_Os02g10230.1 : metal cation transporter, putative, expressed
MaizeGDB (Corn) Zm00025a034657
Brachypodium KQJ93859 , KQJ93855 , KQJ93856
Barley -
Wheat TraesCS6A02G158700 , TraesCS6D02G153800
Populus -


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cDNA sequences
Sobic.004G079700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G243500 alpha-N-acetylglucosaminidase, putative, expressed K01205: alpha-N-acetylglucosaminidase
2 Sobic.002G306700 expressed protein -
3 Sobic.004G161900 AMP-binding enzyme, putative, expressed K01895: ACSS1_2, acetyl-CoA synthetase
4 Sobic.003G368000 OsFBT3 - F-box and tubby domain containing protein, expressed -
5 Sobic.004G261500 phosphoribosyl transferase, putative, expressed -
6 Sobic.001G443100 Oxidoreductase superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
7 Sobic.007G193200 MTA/SAH nucleosidase, putative, expressed K01244: 5'-methylthioadenosine nucleosidase
8 Sobic.005G100800 initiation factor 2 subunit family domain containing protein, expressed K08963: methylthioribose-1-phosphate isomerase
9 Sobic.005G033000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
10 Sobic.003G045600 aminotransferase, classes I and II, domain containing protein, expressed -
11 Sobic.008G037900 transcription factor, putative, expressed K14431: transcription factor TGA
12 Sobic.004G079900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
13 Sobic.004G339800 phosphate transporter 1, putative, expressed -
14 Sobic.001G365200 aminotransferase domain containing protein, putative, expressed -
15 Sobic.002G153100 "bZIP, coexpress with genes associated with the hormonesignaling pathway, anther develop-ment in Arabidopsis"(PubMedID : 28944535)@transcription factor, putative, expressed K14431: transcription factor TGA
16 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
17 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
18 Sobic.001G395900 Nicotianamine synthase 4("PubMedID : 26759170,PubMedID : 24597475")@nicotianamine synthase, putative, expressed K05953: nicotianamine synthase
19 Sobic.004G299500 - -
20 Sobic.003G020500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic004G079700 Sobic004G079700 Sobic006G243500 Sobic006G243500 Sobic004G079700--Sobic006G243500 Sobic002G306700 Sobic002G306700 Sobic004G079700--Sobic002G306700 Sobic004G161900 Sobic004G161900 Sobic004G079700--Sobic004G161900 Sobic003G368000 Sobic003G368000 Sobic004G079700--Sobic003G368000 Sobic004G261500 Sobic004G261500 Sobic004G079700--Sobic004G261500 Sobic001G443100 Sobic001G443100 Sobic004G079700--Sobic001G443100 Sobic007G193200 Sobic007G193200 Sobic004G079700--Sobic007G193200 Sobic005G100800 Sobic005G100800 Sobic004G079700--Sobic005G100800 Sobic005G033000 Sobic005G033000 Sobic004G079700--Sobic005G033000 Sobic006G243500--Sobic004G079700 Sobic009G246700 Sobic009G246700 Sobic006G243500--Sobic009G246700 Sobic006G243500--Sobic004G161900 Sobic003G045600 Sobic003G045600 Sobic006G243500--Sobic003G045600 Sobic006G243500--Sobic005G100800 Sobic001G460400 Sobic001G460400 Sobic006G243500--Sobic001G460400 Sobic006G000600 Sobic006G000600 Sobic006G243500--Sobic006G000600 Sobic006G243500--Sobic007G193200 Sobic002G408800 Sobic002G408800 Sobic006G243500--Sobic002G408800 Sobic002G306700--Sobic004G079700 Sobic002G114800 Sobic002G114800 Sobic002G306700--Sobic002G114800 Sobic003G432100 Sobic003G432100 Sobic002G306700--Sobic003G432100 Sobic002G306700--Sobic002G408800 Sobic008G156300 Sobic008G156300 Sobic002G306700--Sobic008G156300 Sobic007G120800 Sobic007G120800 Sobic002G306700--Sobic007G120800 Sobic002G306700--Sobic006G243500 Sobic004G163300 Sobic004G163300 Sobic002G306700--Sobic004G163300 Sobic005G075600 Sobic005G075600 Sobic002G306700--Sobic005G075600 Sobic004G161900--Sobic003G368000 Sobic003G017601 Sobic003G017601 Sobic004G161900--Sobic003G017601 Sobic010G045400 Sobic010G045400 Sobic004G161900--Sobic010G045400 Sobic008G037900 Sobic008G037900 Sobic004G161900--Sobic008G037900 Sobic004G161900--Sobic001G460400 Sobic001G218500 Sobic001G218500 Sobic004G161900--Sobic001G218500 Sobic003G079100 Sobic003G079100 Sobic004G161900--Sobic003G079100 Sobic002G383900 Sobic002G383900 Sobic004G161900--Sobic002G383900 Sobic003G020500 Sobic003G020500 Sobic004G161900--Sobic003G020500 Sobic003G368000--Sobic004G161900 Sobic003G368000--Sobic008G037900 Sobic003G099000 Sobic003G099000 Sobic003G368000--Sobic003G099000 Sobic003G368000--Sobic010G045400 Sobic003G368000--Sobic003G017601 Sobic010G097200 Sobic010G097200 Sobic003G368000--Sobic010G097200 Sobic010G191700 Sobic010G191700 Sobic003G368000--Sobic010G191700 Sobic003G368000--Sobic003G079100 Sobic002G391400 Sobic002G391400 Sobic003G368000--Sobic002G391400 Sobic001G395900 Sobic001G395900 Sobic004G261500--Sobic001G395900 Sobic005G101000 Sobic005G101000 Sobic004G261500--Sobic005G101000 Sobic006G230100 Sobic006G230100 Sobic004G261500--Sobic006G230100 Sobic004G299500 Sobic004G299500 Sobic004G261500--Sobic004G299500 Sobic008G058600 Sobic008G058600 Sobic004G261500--Sobic008G058600 Sobic007G202480 Sobic007G202480 Sobic004G261500--Sobic007G202480 Sobic006G230200 Sobic006G230200 Sobic004G261500--Sobic006G230200 Sobic001G153100 Sobic001G153100 Sobic004G261500--Sobic001G153100 Sobic003G154500 Sobic003G154500 Sobic004G261500--Sobic003G154500 Sobic001G443100--Sobic004G261500 Sobic001G443100--Sobic001G395900 Sobic001G443100--Sobic005G101000 Sobic002G082000 Sobic002G082000 Sobic001G443100--Sobic002G082000 Sobic001G443100--Sobic006G230100 Sobic001G443100--Sobic003G154500 Sobic001G443100--Sobic005G033000 Sobic001G443100--Sobic006G230200 Sobic001G443100--Sobic008G058600 Sobic007G193200--Sobic004G261500 Sobic004G079900 Sobic004G079900 Sobic007G193200--Sobic004G079900 Sobic001G181600 Sobic001G181600 Sobic007G193200--Sobic001G181600 Sobic007G193200--Sobic003G154500 Sobic001G218400 Sobic001G218400 Sobic007G193200--Sobic001G218400 Sobic007G193200--Sobic005G033000 Sobic001G454900 Sobic001G454900 Sobic007G193200--Sobic001G454900 Sobic005G119900 Sobic005G119900 Sobic007G193200--Sobic005G119900 Sobic003G441800 Sobic003G441800 Sobic007G193200--Sobic003G441800 Sobic005G100800--Sobic007G193200 Sobic005G110541 Sobic005G110541 Sobic005G100800--Sobic005G110541 Sobic005G100800--Sobic004G261500 Sobic008G109400 Sobic008G109400 Sobic005G100800--Sobic008G109400 Sobic001G271300 Sobic001G271300 Sobic005G100800--Sobic001G271300 Sobic005G100800--Sobic001G395900 Sobic005G100800--Sobic003G154500 Sobic005G100800--Sobic006G230200 Sobic002G041100 Sobic002G041100 Sobic005G100800--Sobic002G041100 Sobic005G033000--Sobic010G097200 Sobic005G033000--Sobic003G154500 Sobic005G033000--Sobic004G261500 Sobic009G065700 Sobic009G065700 Sobic005G033000--Sobic009G065700 Sobic005G033000--Sobic001G218400 Sobic001G414800 Sobic001G414800 Sobic005G033000--Sobic001G414800 Sobic002G096000 Sobic002G096000 Sobic005G033000--Sobic002G096000 Sobic005G033000--Sobic004G079900 Sobic001G499900 Sobic001G499900 Sobic005G033000--Sobic001G499900
Octagon: transcription factors


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