Gene annotation
Transcriptome id Sobic.003G045600.5,Sobic.003G045600.6,Sobic.003G045600.3,Sobic.003G045600.4,Sobic.003G045600.1
Synonym Sb03g004000
Functional annotation aminotransferase, classes I and II, domain containing protein, expressed
UniProt A0A1B6Q1A9 , A0A1B6Q1B9
Pfam PF01053
Panther DB PTHR11751 PTHR11751:SF184 PTHR11751:SF184 PTHR11751
NCBI CDD KOG0257; Kynurenine aminotransferase, glutamine transaminase K
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G80360 : Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
RAP-DB (Rice) LOC_Os01g08270.1 : aminotransferase, classes I and II, domain containing protein, expressed
MaizeGDB (Corn) Zm00025a040323 , Zm00025a023199 , Zm00025a035746
Brachypodium KQK02991 , KQK02992
Barley HORVU3Hr1G022770.7 , HORVU3Hr1G022770.6 , HORVU3Hr1G022770.5 , HORVU3Hr1G022770.4 , HORVU3Hr1G022770.3 , HORVU3Hr1G022770.2 , HORVU3Hr1G022770.1
Wheat TraesCS3B02G141600 , TraesCS3A02G122400 , TraesCS3D02G124300
Populus -


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cDNA sequences
Sobic.003G045600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G259401 - K06130: lysophospholipase II
2 Sobic.003G236800 -(PubMedID : 26976818)@bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
3 Sobic.002G101300 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
4 Sobic.004G079700 metal cation transporter, putative, expressed K07238: TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family
5 Sobic.002G153100 "bZIP, coexpress with genes associated with the hormonesignaling pathway, anther develop-ment in Arabidopsis"(PubMedID : 28944535)@transcription factor, putative, expressed K14431: transcription factor TGA
6 Sobic.001G140000 early-responsive to dehydration protein-related, putative, expressed -
7 Sobic.007G119800 ABC transporter, ATP-binding protein, putative, expressed -
8 Sobic.002G274600 glycosyl transferase family 8 protein, expressed -
9 Sobic.008G151500 EXS family protein, putative, expressed -
10 Sobic.006G243500 alpha-N-acetylglucosaminidase, putative, expressed K01205: alpha-N-acetylglucosaminidase
11 Sobic.004G079900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
12 Sobic.008G037900 transcription factor, putative, expressed K14431: transcription factor TGA
13 Sobic.002G177800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.002G197000 cytochrome P450 72A1, putative, expressed K10717: cytokinin trans-hydroxylase
15 Sobic.006G018300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
16 Sobic.001G365200 aminotransferase domain containing protein, putative, expressed -
17 Sobic.007G120800 puromycin-sensitive aminopeptidase, putative, expressed K08776: puromycin-sensitive aminopeptidase
18 Sobic.007G193200 MTA/SAH nucleosidase, putative, expressed K01244: 5'-methylthioadenosine nucleosidase
19 Sobic.001G227850 - -
20 Sobic.001G346500 Ca exchanger(PubMedID : 22196357)@sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter


Gene co-expression network
sample Sobic003G045600 Sobic003G045600 Sobic006G259401 Sobic006G259401 Sobic003G045600--Sobic006G259401 Sobic003G236800 Sobic003G236800 Sobic003G045600--Sobic003G236800 Sobic002G101300 Sobic002G101300 Sobic003G045600--Sobic002G101300 Sobic004G079700 Sobic004G079700 Sobic003G045600--Sobic004G079700 Sobic002G153100 Sobic002G153100 Sobic003G045600--Sobic002G153100 Sobic001G140000 Sobic001G140000 Sobic003G045600--Sobic001G140000 Sobic007G119800 Sobic007G119800 Sobic003G045600--Sobic007G119800 Sobic002G274600 Sobic002G274600 Sobic003G045600--Sobic002G274600 Sobic008G151500 Sobic008G151500 Sobic003G045600--Sobic008G151500 Sobic006G259401--Sobic003G045600 Sobic006G259401--Sobic008G151500 Sobic006G259401--Sobic003G236800 Sobic006G259401--Sobic002G101300 Sobic007G120800 Sobic007G120800 Sobic006G259401--Sobic007G120800 Sobic006G259401--Sobic001G140000 Sobic002G283100 Sobic002G283100 Sobic006G259401--Sobic002G283100 Sobic001G392200 Sobic001G392200 Sobic006G259401--Sobic001G392200 Sobic007G179900 Sobic007G179900 Sobic006G259401--Sobic007G179900 Sobic003G236800--Sobic006G259401 Sobic003G236800--Sobic003G045600 Sobic002G117600 Sobic002G117600 Sobic003G236800--Sobic002G117600 Sobic002G408800 Sobic002G408800 Sobic003G236800--Sobic002G408800 Sobic003G236800--Sobic007G120800 Sobic003G236800--Sobic007G119800 Sobic003G236800--Sobic008G151500 Sobic003G236800--Sobic007G179900 Sobic001G380600 Sobic001G380600 Sobic003G236800--Sobic001G380600 Sobic010G101600 Sobic010G101600 Sobic002G101300--Sobic010G101600 Sobic010G018500 Sobic010G018500 Sobic002G101300--Sobic010G018500 Sobic002G368600 Sobic002G368600 Sobic002G101300--Sobic002G368600 Sobic003G261100 Sobic003G261100 Sobic002G101300--Sobic003G261100 Sobic002G101300--Sobic003G045600 Sobic002G101300--Sobic006G259401 Sobic002G271300 Sobic002G271300 Sobic002G101300--Sobic002G271300 Sobic004G257000 Sobic004G257000 Sobic002G101300--Sobic004G257000 Sobic002G101300--Sobic001G392200 Sobic006G243500 Sobic006G243500 Sobic004G079700--Sobic006G243500 Sobic002G306700 Sobic002G306700 Sobic004G079700--Sobic002G306700 Sobic004G161900 Sobic004G161900 Sobic004G079700--Sobic004G161900 Sobic003G368000 Sobic003G368000 Sobic004G079700--Sobic003G368000 Sobic004G261500 Sobic004G261500 Sobic004G079700--Sobic004G261500 Sobic001G443100 Sobic001G443100 Sobic004G079700--Sobic001G443100 Sobic007G193200 Sobic007G193200 Sobic004G079700--Sobic007G193200 Sobic005G100800 Sobic005G100800 Sobic004G079700--Sobic005G100800 Sobic005G033000 Sobic005G033000 Sobic004G079700--Sobic005G033000 Sobic004G339800 Sobic004G339800 Sobic002G153100--Sobic004G339800 Sobic006G078100 Sobic006G078100 Sobic002G153100--Sobic006G078100 Sobic002G153100--Sobic005G033000 Sobic008G037900 Sobic008G037900 Sobic002G153100--Sobic008G037900 Sobic010G097200 Sobic010G097200 Sobic002G153100--Sobic010G097200 Sobic002G153100--Sobic003G045600 Sobic002G153100--Sobic001G443100 Sobic002G153100--Sobic007G193200 Sobic001G454900 Sobic001G454900 Sobic002G153100--Sobic001G454900 Sobic002G381400 Sobic002G381400 Sobic001G140000--Sobic002G381400 Sobic010G089600 Sobic010G089600 Sobic001G140000--Sobic010G089600 Sobic004G184101 Sobic004G184101 Sobic001G140000--Sobic004G184101 Sobic004G035400 Sobic004G035400 Sobic001G140000--Sobic004G035400 Sobic001G419000 Sobic001G419000 Sobic001G140000--Sobic001G419000 Sobic008G023300 Sobic008G023300 Sobic001G140000--Sobic008G023300 Sobic007G127550 Sobic007G127550 Sobic001G140000--Sobic007G127550 Sobic002G096300 Sobic002G096300 Sobic001G140000--Sobic002G096300 Sobic010G193600 Sobic010G193600 Sobic001G140000--Sobic010G193600 Sobic003G017601 Sobic003G017601 Sobic007G119800--Sobic003G017601 Sobic001G218500 Sobic001G218500 Sobic007G119800--Sobic001G218500 Sobic007G119800--Sobic004G161900 Sobic007G120000 Sobic007G120000 Sobic007G119800--Sobic007G120000 Sobic005G075600 Sobic005G075600 Sobic007G119800--Sobic005G075600 Sobic003G020500 Sobic003G020500 Sobic007G119800--Sobic003G020500 Sobic007G119800--Sobic007G193200 Sobic010G045400 Sobic010G045400 Sobic007G119800--Sobic010G045400 Sobic007G119800--Sobic001G454900 Sobic009G084400 Sobic009G084400 Sobic002G274600--Sobic009G084400 Sobic002G197000 Sobic002G197000 Sobic002G274600--Sobic002G197000 Sobic004G079900 Sobic004G079900 Sobic002G274600--Sobic004G079900 Sobic010G010000 Sobic010G010000 Sobic002G274600--Sobic010G010000 Sobic004G014600 Sobic004G014600 Sobic002G274600--Sobic004G014600 Sobic001G218400 Sobic001G218400 Sobic002G274600--Sobic001G218400 Sobic002G029600 Sobic002G029600 Sobic002G274600--Sobic002G029600 Sobic006G171100 Sobic006G171100 Sobic002G274600--Sobic006G171100 Sobic005G106300 Sobic005G106300 Sobic002G274600--Sobic005G106300 Sobic001G443200 Sobic001G443200 Sobic008G151500--Sobic001G443200 Sobic001G220900 Sobic001G220900 Sobic008G151500--Sobic001G220900 SobicK043400 SobicK043400 Sobic008G151500--SobicK043400 Sobic008G151500--Sobic006G259401 Sobic004G000100 Sobic004G000100 Sobic008G151500--Sobic004G000100 Sobic001G458800 Sobic001G458800 Sobic008G151500--Sobic001G458800 Sobic003G034900 Sobic003G034900 Sobic008G151500--Sobic003G034900 Sobic002G070300 Sobic002G070300 Sobic008G151500--Sobic002G070300 Sobic002G295700 Sobic002G295700 Sobic008G151500--Sobic002G295700
Octagon: transcription factors


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